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The map label for this gene is rbsA2 [H]

Identifier: 119714926

GI number: 119714926

Start: 717521

End: 719047

Strand: Reverse

Name: rbsA2 [H]

Synonym: Noca_0678

Alternate gene names: 119714926

Gene position: 719047-717521 (Counterclockwise)

Preceding gene: 119714927

Following gene: 119714925

Centisome position: 14.42

GC content: 71.05

Gene sequence:

>1527_bases
ATGCTGTCACCCGGGATCATCATCAGCGGACCGGCTCCGGCCCTCAGCGTCCGCGGCCTCACGAAGAGCTTCGGCTCGAC
GCAGGCGGTTCGGAAGGTCACCTTCGACGTCCGTAGTGGGGAGGTGCACGCTCTCCTCGGTCACAACGGATCCGGGAAGT
CGACCCTGGTCAAGATGATCAGCGGTCTGGTCCGTCCGGACTCCGGTGGCTTCACCATCGGATCGGGGGACGACGGGATC
CTCAGGATCGGCGTCGTCCACCAGGACCTGGCGCTCTGCGCTGACGCGACGGTGCTGGAGAACTGCTGCATGGGCGACGT
CGTCGCGCGGCGAGGCCCGTTCGTCGACTGGGAGAAGGAGCGGCGGATCCTGCAGCCGATCCTCGACTCGCTGGCCGCGG
ACTTCCGCCCGAACACGATGGTTCGAGATCTCTCTCCGGCCAACCAGGCGGTGGTGGCGATCGCCCGCGCGCTCAAGCGT
GGCGCAACGAGAGCCCCGCTGGACCTGCTGATCCTGGACGAGGCCACGGCCCGGCTGCGGGGGACGGACGCCGACATGGT
GCTCGCCACCGCGCGCCGGGTCGCGGCCCAGGGCGGTGGGGTGCTGCTGGTCACCCACCACATGTCCGAGGTCCTCTCGG
CGGCCGACCGGGCCACGGTGCTGGCCAGCGGTGCCGTGGTCGACACCGTCGACGTCTCCACCACGCACGAGGACGAGCTG
CTCCGCATGGTCAGTGGTCGCCAGGTGACCGCGTTGCGGCGAACGTCGGCGACCACCGTGGCCGCCGACCGGCCGCCACG
GCTGGTCCTGGACCGGGTCACCGGTGAGCAGGTCCGCGACCTGTCCCTGGAGATCCGCCCGGGCGAGGTGCTCGGCGTCA
CCGGCGCCACGGGCGCCGGGTTCGAAGAGCTGCCGTACCTGATCACCCGGCCGGACCGCTGCCACGCCGGAGCGATCCAC
CTCGACGGGCACAGGCTGCGCGGCCGGACCTACGCCCAGAGCCGGAGGAACGGGCTCGGAGTCGTTCCGGCAGACCGGCT
CCTCAACGGCGTGTACGTCGCGGCATCGGTCCGTGAGAACCTCTCCCCGGTCGTACGCCGCGCCAACCGGATCCTCGGCC
TGATCGCCGACCCCCGGGAGCGATCCTGGGCGCGTCGCGCCACTGGGGCGTTCCAGGTCCGGACGAGTGGCCCGGACGCG
CCGATCGGGTCGCTCAGCGGAGGCAACCAGCAGAAGGTGCTGCTGGCCAGGGTCCTGGAGGACGAGCCGAAGGTGCTGAT
CCTGCACGAACCCACCCAGGGCGTCGACGAGCCGACCCGCCGGACGCTGATCGAGATCGTCCGCGAGGCCGCACGGGCAG
GGACGGCTGTCCTCTACATCTCCTGCGACGTCGACGAGGTCGCCGGTGCGGCCGACCGGGTGCTGGTGCTGCGAGATGGC
CGCTGCGTCCACGAGTCTCCGGGCGGGCTGGACCACGCTGACGAGATCTACGCCGCGAGCTACCTCACGGGAGCAGGCGT
GCCGTGA

Upstream 100 bases:

>100_bases
CTGAAGGACGTCGACACCTCGACCTCGAAGTCGGTCGACGAGGCGCTCTTCGGACCGGCCTACCAGGACGGCTACAAGGA
GCTGTGGGGCCTCTCCTGAC

Downstream 100 bases:

>100_bases
GGCTCCTGATCCGCGGTGCGGACGCGGTGCTCACGAGCCACCCGGCTGCCGACAGCGTCCTGGTCGAGGACGGCGTGATC
ACCGCGATCGGGACCGGCCT

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MLSPGIIISGPAPALSVRGLTKSFGSTQAVRKVTFDVRSGEVHALLGHNGSGKSTLVKMISGLVRPDSGGFTIGSGDDGI
LRIGVVHQDLALCADATVLENCCMGDVVARRGPFVDWEKERRILQPILDSLAADFRPNTMVRDLSPANQAVVAIARALKR
GATRAPLDLLILDEATARLRGTDADMVLATARRVAAQGGGVLLVTHHMSEVLSAADRATVLASGAVVDTVDVSTTHEDEL
LRMVSGRQVTALRRTSATTVAADRPPRLVLDRVTGEQVRDLSLEIRPGEVLGVTGATGAGFEELPYLITRPDRCHAGAIH
LDGHRLRGRTYAQSRRNGLGVVPADRLLNGVYVAASVRENLSPVVRRANRILGLIADPRERSWARRATGAFQVRTSGPDA
PIGSLSGGNQQKVLLARVLEDEPKVLILHEPTQGVDEPTRRTLIEIVREAARAGTAVLYISCDVDEVAGAADRVLVLRDG
RCVHESPGGLDHADEIYAASYLTGAGVP

Sequences:

>Translated_508_residues
MLSPGIIISGPAPALSVRGLTKSFGSTQAVRKVTFDVRSGEVHALLGHNGSGKSTLVKMISGLVRPDSGGFTIGSGDDGI
LRIGVVHQDLALCADATVLENCCMGDVVARRGPFVDWEKERRILQPILDSLAADFRPNTMVRDLSPANQAVVAIARALKR
GATRAPLDLLILDEATARLRGTDADMVLATARRVAAQGGGVLLVTHHMSEVLSAADRATVLASGAVVDTVDVSTTHEDEL
LRMVSGRQVTALRRTSATTVAADRPPRLVLDRVTGEQVRDLSLEIRPGEVLGVTGATGAGFEELPYLITRPDRCHAGAIH
LDGHRLRGRTYAQSRRNGLGVVPADRLLNGVYVAASVRENLSPVVRRANRILGLIADPRERSWARRATGAFQVRTSGPDA
PIGSLSGGNQQKVLLARVLEDEPKVLILHEPTQGVDEPTRRTLIEIVREAARAGTAVLYISCDVDEVAGAADRVLVLRDG
RCVHESPGGLDHADEIYAASYLTGAGVP
>Mature_508_residues
MLSPGIIISGPAPALSVRGLTKSFGSTQAVRKVTFDVRSGEVHALLGHNGSGKSTLVKMISGLVRPDSGGFTIGSGDDGI
LRIGVVHQDLALCADATVLENCCMGDVVARRGPFVDWEKERRILQPILDSLAADFRPNTMVRDLSPANQAVVAIARALKR
GATRAPLDLLILDEATARLRGTDADMVLATARRVAAQGGGVLLVTHHMSEVLSAADRATVLASGAVVDTVDVSTTHEDEL
LRMVSGRQVTALRRTSATTVAADRPPRLVLDRVTGEQVRDLSLEIRPGEVLGVTGATGAGFEELPYLITRPDRCHAGAIH
LDGHRLRGRTYAQSRRNGLGVVPADRLLNGVYVAASVRENLSPVVRRANRILGLIADPRERSWARRATGAFQVRTSGPDA
PIGSLSGGNQQKVLLARVLEDEPKVLILHEPTQGVDEPTRRTLIEIVREAARAGTAVLYISCDVDEVAGAADRVLVLRDG
RCVHESPGGLDHADEIYAASYLTGAGVP

Specific function: Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI45446740, Length=224, Percent_Identity=25.8928571428571, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI47078218, Length=224, Percent_Identity=25.8928571428571, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI156105685, Length=213, Percent_Identity=30.5164319248826, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI150417984, Length=243, Percent_Identity=29.6296296296296, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI66529005, Length=207, Percent_Identity=28.9855072463768, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI6005701, Length=205, Percent_Identity=29.2682926829268, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI105990541, Length=227, Percent_Identity=26.8722466960352, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI255708477, Length=202, Percent_Identity=31.6831683168317, Blast_Score=67, Evalue=6e-11,
Organism=Escherichia coli, GI1790190, Length=484, Percent_Identity=31.6115702479339, Blast_Score=238, Evalue=5e-64,
Organism=Escherichia coli, GI1789991, Length=489, Percent_Identity=32.5153374233129, Blast_Score=238, Evalue=1e-63,
Organism=Escherichia coli, GI1788897, Length=506, Percent_Identity=32.4110671936759, Blast_Score=234, Evalue=9e-63,
Organism=Escherichia coli, GI1788210, Length=488, Percent_Identity=32.3770491803279, Blast_Score=230, Evalue=1e-61,
Organism=Escherichia coli, GI48995001, Length=487, Percent_Identity=33.0595482546201, Blast_Score=230, Evalue=2e-61,
Organism=Escherichia coli, GI1788472, Length=493, Percent_Identity=28.8032454361055, Blast_Score=224, Evalue=8e-60,
Organism=Escherichia coli, GI1787792, Length=497, Percent_Identity=29.7786720321932, Blast_Score=209, Evalue=5e-55,
Organism=Escherichia coli, GI1790525, Length=491, Percent_Identity=28.3095723014257, Blast_Score=208, Evalue=7e-55,
Organism=Escherichia coli, GI1788225, Length=230, Percent_Identity=31.7391304347826, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1788506, Length=531, Percent_Identity=26.5536723163842, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI48994943, Length=506, Percent_Identity=25.098814229249, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789873, Length=224, Percent_Identity=29.0178571428571, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87082268, Length=236, Percent_Identity=30.5084745762712, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788761, Length=227, Percent_Identity=31.7180616740088, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787029, Length=223, Percent_Identity=26.9058295964126, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081782, Length=215, Percent_Identity=31.6279069767442, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1790544, Length=239, Percent_Identity=30.1255230125523, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI87081791, Length=234, Percent_Identity=28.6324786324786, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1789672, Length=233, Percent_Identity=28.3261802575107, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87081834, Length=196, Percent_Identity=31.6326530612245, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786698, Length=221, Percent_Identity=27.1493212669683, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787712, Length=219, Percent_Identity=28.310502283105, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI48994997, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1786398, Length=230, Percent_Identity=27.8260869565217, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1786319, Length=279, Percent_Identity=26.5232974910394, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787370, Length=231, Percent_Identity=28.1385281385281, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787759, Length=216, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787089, Length=245, Percent_Identity=28.1632653061224, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1786872, Length=228, Percent_Identity=29.3859649122807, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788165, Length=214, Percent_Identity=30.3738317757009, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1789032, Length=225, Percent_Identity=25.7777777777778, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787105, Length=232, Percent_Identity=25.8620689655172, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87081709, Length=209, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789864, Length=234, Percent_Identity=28.6324786324786, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789593, Length=224, Percent_Identity=27.6785714285714, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790467, Length=222, Percent_Identity=27.027027027027, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87082267, Length=225, Percent_Identity=31.5555555555556, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1789891, Length=209, Percent_Identity=27.7511961722488, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1788450, Length=261, Percent_Identity=27.2030651340996, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=230, Percent_Identity=28.2608695652174, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17567243, Length=234, Percent_Identity=29.4871794871795, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=212, Percent_Identity=27.8301886792453, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71992285, Length=210, Percent_Identity=27.6190476190476, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=241, Percent_Identity=27.8008298755187, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=218, Percent_Identity=31.1926605504587, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=218, Percent_Identity=31.1926605504587, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=218, Percent_Identity=31.1926605504587, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6320339, Length=229, Percent_Identity=27.0742358078603, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24666092, Length=235, Percent_Identity=28.0851063829787, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24653245, Length=209, Percent_Identity=28.2296650717703, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281363262, Length=209, Percent_Identity=28.2296650717703, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI23397593, Length=218, Percent_Identity=29.3577981651376, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI116007184, Length=203, Percent_Identity=29.064039408867, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI221500365, Length=203, Percent_Identity=29.064039408867, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24641565, Length=214, Percent_Identity=27.1028037383178, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015861
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.17 [H]

Molecular weight: Translated: 53982; Mature: 53982

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSPGIIISGPAPALSVRGLTKSFGSTQAVRKVTFDVRSGEVHALLGHNGSGKSTLVKMI
CCCCCEEEECCCCCEEHHHHHHHCCCHHHHHEEEEEECCCCEEEEECCCCCCHHHHHHHH
SGLVRPDSGGFTIGSGDDGILRIGVVHQDLALCADATVLENCCMGDVVARRGPFVDWEKE
HHHCCCCCCCEEECCCCCCEEEEEEEHHHHHHHHCHHHHHHCCHHHHHHHCCCCCCCHHH
RRILQPILDSLAADFRPNTMVRDLSPANQAVVAIARALKRGATRAPLDLLILDEATARLR
HHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHC
GTDADMVLATARRVAAQGGGVLLVTHHMSEVLSAADRATVLASGAVVDTVDVSTTHEDEL
CCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCHHHH
LRMVSGRQVTALRRTSATTVAADRPPRLVLDRVTGEQVRDLSLEIRPGEVLGVTGATGAG
HHHHCCCEEEEEECCCCEEEECCCCCCEEEECCCCCHHHCCEEEECCCCEEEECCCCCCC
FEELPYLITRPDRCHAGAIHLDGHRLRGRTYAQSRRNGLGVVPADRLLNGVYVAASVREN
HHHCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHCCEEEEEHHHHH
LSPVVRRANRILGLIADPRERSWARRATGAFQVRTSGPDAPIGSLSGGNQQKVLLARVLE
HHHHHHHHHHHEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHC
DEPKVLILHEPTQGVDEPTRRTLIEIVREAARAGTAVLYISCDVDEVAGAADRVLVLRDG
CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCEEEEEECC
RCVHESPGGLDHADEIYAASYLTGAGVP
EEECCCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLSPGIIISGPAPALSVRGLTKSFGSTQAVRKVTFDVRSGEVHALLGHNGSGKSTLVKMI
CCCCCEEEECCCCCEEHHHHHHHCCCHHHHHEEEEEECCCCEEEEECCCCCCHHHHHHHH
SGLVRPDSGGFTIGSGDDGILRIGVVHQDLALCADATVLENCCMGDVVARRGPFVDWEKE
HHHCCCCCCCEEECCCCCCEEEEEEEHHHHHHHHCHHHHHHCCHHHHHHHCCCCCCCHHH
RRILQPILDSLAADFRPNTMVRDLSPANQAVVAIARALKRGATRAPLDLLILDEATARLR
HHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHC
GTDADMVLATARRVAAQGGGVLLVTHHMSEVLSAADRATVLASGAVVDTVDVSTTHEDEL
CCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCHHHH
LRMVSGRQVTALRRTSATTVAADRPPRLVLDRVTGEQVRDLSLEIRPGEVLGVTGATGAG
HHHHCCCEEEEEECCCCEEEECCCCCCEEEECCCCCHHHCCEEEECCCCEEEECCCCCCC
FEELPYLITRPDRCHAGAIHLDGHRLRGRTYAQSRRNGLGVVPADRLLNGVYVAASVREN
HHHCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHCCEEEEEHHHHH
LSPVVRRANRILGLIADPRERSWARRATGAFQVRTSGPDAPIGSLSGGNQQKVLLARVLE
HHHHHHHHHHHEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHC
DEPKVLILHEPTQGVDEPTRRTLIEIVREAARAGTAVLYISCDVDEVAGAADRVLVLRDG
CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCEEEEEECC
RCVHESPGGLDHADEIYAASYLTGAGVP
EEECCCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]