| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is cutL [H]
Identifier: 119714868
GI number: 119714868
Start: 647541
End: 649913
Strand: Reverse
Name: cutL [H]
Synonym: Noca_0612
Alternate gene names: 119714868
Gene position: 649913-647541 (Counterclockwise)
Preceding gene: 119714872
Following gene: 119714867
Centisome position: 13.04
GC content: 63.8
Gene sequence:
>2373_bases GTGAGTAGACCTGGCGCTTCCGGTGGTCTCGGCCCTTCAGCCAAGCGATACGTGGGACAGCCCGTGCGTCGCCGTGAGGA CGCGCGGCTCCTGCGGGGAGATGCGCGTTTCGTGGACGATGTCGATATTCACGGGCAGCTGTACATGAGCGTGGTGCGTT CATCTGAGGCCCATGCGCGCATCGTCTCCGTGGAGCCCTCTGCGGCCCGACGGGCTCCCGGCGTCCGGCTAGTCATCACG GCTGATGACATCGATGCTGAAGTGCCGCTGGAACAGATCGGCTACCACGAGGTTTACCCGCAGATCGACGACTATCTGCA CCCGGTCTTCGCCGGTGACCGTGTCCGGTACGTCGGGCAACCCGTCGCCGCCGTCATCGCTGACACGCCGTATCTGGCTG AAGACGCCGCCGGGCTGGTGGAGGTCACCTACGACCTCCTTCCGCCGGTGCTCGATCCTCAGTACGCCTTGACCGATGAG GCCGAACCACTCTTCGAGGGGCAGTCCAACGAGGCCGTTCGCATCGTGAAGGCGTACGGCGACGTCGCGGACGCCTTTAA GAAGGCAGCGCATGTCGTGAAGGGTCGCTACGTGGTCGGTCGTCATTCCGGGGTGCCGATGGAGACGAGAGGGTGCATCG CAGAGCCCGACCGCGGCCGCAAGCAACTCTTCATGTGGGGGCCGGTCCACACCCACGACTGTCAGCGCCTCATCGCGCAA GTACTCGAACTCCCGCTCGCGGATCTGCGCATGAAACACGTCGACATCGGAGGGAACTTCGGTGTGAAGGGCGGGGTCTT TCCGGAATACATCATGGTGGGCTGGGCGGCCATGCGTCTGGGACGTCCTGTCAAGTGGACCGAAGATCGCCTCGAGCACA TGGTGGCAAACGCTCACGCTCGCGAACAGGTGCACGAAATGGCCGCGGCCTTCGACGCCGACGGGGTCCTGCTGGCTTTG AAGGACGAGATCTGGCACAACCACGGAGCGTTCATTCGGCAGGCCGAGCCTCTCGTCAGCGACATCACAGTCGGGATGGT CCCAGGCCCCTACCGAGTGCCGGCGTACGACGGGCTCCTTCACGTCGTGGTGTCCAACAAGACGCCGCTGTCCGCCTACC GTGCTCCAGGCAGGTACGAAGGGACCTTCGCTCGCGAGCGGCTCCTCGACCTCGCGGCCGAACAGATCGGCATTTCGCAG GTAGAGATTCGGCGCCGCAATCTGCTGACCGAAGCCGACCTTCCATTCGCGCCGGGCATGGACATCTGTTTCGAGCCCTA CCACTTCGATTCGGGTGACGTCGTTGACCACTTGGACAAAGCGCTCGAGTCGGCGGGGTTCGACGATTGGGAGCGGGAGG CGGCAGAGCTCCGAGCGCAGGGCCGCTTAGTCGGCAACGGAATCGGCATGCTGATGGACAAGGCTGGCCTTGGGCTCTAC GAGACGAGCGCCATCGACGTAGACGCCTCTGGACGGATCAGAGTTCGAACTGGGGCATCTTCCGTCGGACAGGGTATCGA AACAGTCCTGGCGCAGATCGTTGCCGATGAACTCCAAGTCGATCCAGAGCTCATCGACGTCGTTCACGGTGACACCGAGC TTGTGCCCGAGGGTGTCGGCTCCTGGTCGAGTCGCTCGACCGTTCTGGCCGGAGGAGCGGCGCGTCAGGCGGCCCTCGAC ACGCTAGCCAAGGCCAAGAGGCTCGCCAGCGAGATGCTGGAAGCAAATGTGGACGATCTGATCCTCGTCGATGGCCGCAT CGTGGTGTCCGGGCTCGAGCAGCAGGGGTTGAGTCTCGCCGAGATCGCCGGACGGTGGGACGGATGGTCCGCGAGGTTGG CCAACGACGAGCCAGGCCTCGGCGCGCAGGCCGTCTACCTGGATGAGCACATGAACTATCCCTACGGGGTCACTCTCGTG CAGATCGAGATTGATCCCGCCACGGGAGGTCACACCTTGAGGCGTTTCCTTACCAGCACCGAGGCCGGACGAGCGATCAA TCCAATGACCACCCGCGGCCAAGTGATCGGTGCGGCAGCGCAAGGCATCGGAGGTGCCCTCTACGAGGAGTTCCTGTACG ACGAATCCGGTCAACCGTTGGCCACGTCCTTCATGGACTACCTTCTGCCGACTTCGCTGGACGTGCCAGATGTCGACTTC TTCATGACGGAGGACGCGCCTACACCCAACAACCCGTTCGGGGCCAAGGGCTTGGGGGAGGTCGGCCTCATCGCTGTGGG CGCGGCCATCGCGGGCGCCATAGACGATGCCTTTGGCGAAGGTGTGCGCACGATCAAGGTGCCCGTCCCGCCCGAGACGC TCTGGCGGAGGTCGCATTCGATCGCGTTCAGTGATGAACCCGAGTCGATGTGA
Upstream 100 bases:
>100_bases CATCGGGCGGATGCGCTTCTCCCGCCAGCGAGCAGCGGCAGCAACGGCGCCGCGACGACACTTCGTGTCTCGGTACATCG CACAGAAGTGAGGACGAGCA
Downstream 100 bases:
>100_bases GTCGCAACACCCGGAAGACGTCAAACGGTGGTCTCGCATTGTCCGGAACCGAATAGCCCAACTCGTTCCCCAGGATCCAC AGTTGCGTGTCTTTTCGCCG
Product: xanthine dehydrogenase, molybdenum binding subunit apoprotein
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 790; Mature: 789
Protein sequence:
>790_residues MSRPGASGGLGPSAKRYVGQPVRRREDARLLRGDARFVDDVDIHGQLYMSVVRSSEAHARIVSVEPSAARRAPGVRLVIT ADDIDAEVPLEQIGYHEVYPQIDDYLHPVFAGDRVRYVGQPVAAVIADTPYLAEDAAGLVEVTYDLLPPVLDPQYALTDE AEPLFEGQSNEAVRIVKAYGDVADAFKKAAHVVKGRYVVGRHSGVPMETRGCIAEPDRGRKQLFMWGPVHTHDCQRLIAQ VLELPLADLRMKHVDIGGNFGVKGGVFPEYIMVGWAAMRLGRPVKWTEDRLEHMVANAHAREQVHEMAAAFDADGVLLAL KDEIWHNHGAFIRQAEPLVSDITVGMVPGPYRVPAYDGLLHVVVSNKTPLSAYRAPGRYEGTFARERLLDLAAEQIGISQ VEIRRRNLLTEADLPFAPGMDICFEPYHFDSGDVVDHLDKALESAGFDDWEREAAELRAQGRLVGNGIGMLMDKAGLGLY ETSAIDVDASGRIRVRTGASSVGQGIETVLAQIVADELQVDPELIDVVHGDTELVPEGVGSWSSRSTVLAGGAARQAALD TLAKAKRLASEMLEANVDDLILVDGRIVVSGLEQQGLSLAEIAGRWDGWSARLANDEPGLGAQAVYLDEHMNYPYGVTLV QIEIDPATGGHTLRRFLTSTEAGRAINPMTTRGQVIGAAAQGIGGALYEEFLYDESGQPLATSFMDYLLPTSLDVPDVDF FMTEDAPTPNNPFGAKGLGEVGLIAVGAAIAGAIDDAFGEGVRTIKVPVPPETLWRRSHSIAFSDEPESM
Sequences:
>Translated_790_residues MSRPGASGGLGPSAKRYVGQPVRRREDARLLRGDARFVDDVDIHGQLYMSVVRSSEAHARIVSVEPSAARRAPGVRLVIT ADDIDAEVPLEQIGYHEVYPQIDDYLHPVFAGDRVRYVGQPVAAVIADTPYLAEDAAGLVEVTYDLLPPVLDPQYALTDE AEPLFEGQSNEAVRIVKAYGDVADAFKKAAHVVKGRYVVGRHSGVPMETRGCIAEPDRGRKQLFMWGPVHTHDCQRLIAQ VLELPLADLRMKHVDIGGNFGVKGGVFPEYIMVGWAAMRLGRPVKWTEDRLEHMVANAHAREQVHEMAAAFDADGVLLAL KDEIWHNHGAFIRQAEPLVSDITVGMVPGPYRVPAYDGLLHVVVSNKTPLSAYRAPGRYEGTFARERLLDLAAEQIGISQ VEIRRRNLLTEADLPFAPGMDICFEPYHFDSGDVVDHLDKALESAGFDDWEREAAELRAQGRLVGNGIGMLMDKAGLGLY ETSAIDVDASGRIRVRTGASSVGQGIETVLAQIVADELQVDPELIDVVHGDTELVPEGVGSWSSRSTVLAGGAARQAALD TLAKAKRLASEMLEANVDDLILVDGRIVVSGLEQQGLSLAEIAGRWDGWSARLANDEPGLGAQAVYLDEHMNYPYGVTLV QIEIDPATGGHTLRRFLTSTEAGRAINPMTTRGQVIGAAAQGIGGALYEEFLYDESGQPLATSFMDYLLPTSLDVPDVDF FMTEDAPTPNNPFGAKGLGEVGLIAVGAAIAGAIDDAFGEGVRTIKVPVPPETLWRRSHSIAFSDEPESM >Mature_789_residues SRPGASGGLGPSAKRYVGQPVRRREDARLLRGDARFVDDVDIHGQLYMSVVRSSEAHARIVSVEPSAARRAPGVRLVITA DDIDAEVPLEQIGYHEVYPQIDDYLHPVFAGDRVRYVGQPVAAVIADTPYLAEDAAGLVEVTYDLLPPVLDPQYALTDEA EPLFEGQSNEAVRIVKAYGDVADAFKKAAHVVKGRYVVGRHSGVPMETRGCIAEPDRGRKQLFMWGPVHTHDCQRLIAQV LELPLADLRMKHVDIGGNFGVKGGVFPEYIMVGWAAMRLGRPVKWTEDRLEHMVANAHAREQVHEMAAAFDADGVLLALK DEIWHNHGAFIRQAEPLVSDITVGMVPGPYRVPAYDGLLHVVVSNKTPLSAYRAPGRYEGTFARERLLDLAAEQIGISQV EIRRRNLLTEADLPFAPGMDICFEPYHFDSGDVVDHLDKALESAGFDDWEREAAELRAQGRLVGNGIGMLMDKAGLGLYE TSAIDVDASGRIRVRTGASSVGQGIETVLAQIVADELQVDPELIDVVHGDTELVPEGVGSWSSRSTVLAGGAARQAALDT LAKAKRLASEMLEANVDDLILVDGRIVVSGLEQQGLSLAEIAGRWDGWSARLANDEPGLGAQAVYLDEHMNYPYGVTLVQ IEIDPATGGHTLRRFLTSTEAGRAINPMTTRGQVIGAAAQGIGGALYEEFLYDESGQPLATSFMDYLLPTSLDVPDVDFF MTEDAPTPNNPFGAKGLGEVGLIAVGAAIAGAIDDAFGEGVRTIKVPVPPETLWRRSHSIAFSDEPESM
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI91823271, Length=778, Percent_Identity=25.1928020565553, Blast_Score=187, Evalue=5e-47, Organism=Homo sapiens, GI71773480, Length=785, Percent_Identity=25.4777070063694, Blast_Score=180, Evalue=4e-45, Organism=Escherichia coli, GI1789230, Length=763, Percent_Identity=28.4403669724771, Blast_Score=230, Evalue=2e-61, Organism=Escherichia coli, GI1789246, Length=809, Percent_Identity=25.2163164400494, Blast_Score=197, Evalue=2e-51, Organism=Escherichia coli, GI1786478, Length=772, Percent_Identity=26.8134715025907, Blast_Score=159, Evalue=9e-40, Organism=Caenorhabditis elegans, GI17540638, Length=776, Percent_Identity=23.5824742268041, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17539860, Length=772, Percent_Identity=21.7616580310881, Blast_Score=128, Evalue=1e-29, Organism=Caenorhabditis elegans, GI32566215, Length=772, Percent_Identity=21.5025906735751, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI17737937, Length=772, Percent_Identity=24.740932642487, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI24647195, Length=816, Percent_Identity=25, Blast_Score=132, Evalue=1e-30, Organism=Drosophila melanogaster, GI24647199, Length=805, Percent_Identity=23.7267080745342, Blast_Score=130, Evalue=4e-30, Organism=Drosophila melanogaster, GI24647197, Length=781, Percent_Identity=24.7119078104994, Blast_Score=123, Evalue=4e-28, Organism=Drosophila melanogaster, GI24647193, Length=787, Percent_Identity=23.7611181702668, Blast_Score=123, Evalue=5e-28, Organism=Drosophila melanogaster, GI24647201, Length=809, Percent_Identity=22.991347342398, Blast_Score=110, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 85534; Mature: 85402
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPGASGGLGPSAKRYVGQPVRRREDARLLRGDARFVDDVDIHGQLYMSVVRSSEAHAR CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEE IVSVEPSAARRAPGVRLVITADDIDAEVPLEQIGYHEVYPQIDDYLHPVFAGDRVRYVGQ EEEECCHHHHCCCCEEEEEEECCCCCCCCHHHCCCHHHCCCHHHHHCHHHCCCEEEECCC PVAAVIADTPYLAEDAAGLVEVTYDLLPPVLDPQYALTDEAEPLFEGQSNEAVRIVKAYG CHHHHHCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEHHHH DVADAFKKAAHVVKGRYVVGRHSGVPMETRGCIAEPDRGRKQLFMWGPVHTHDCQRLIAQ HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHH VLELPLADLRMKHVDIGGNFGVKGGVFPEYIMVGWAAMRLGRPVKWTEDRLEHMVANAHA HHHCCHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH REQVHEMAAAFDADGVLLALKDEIWHNHGAFIRQAEPLVSDITVGMVPGPYRVPAYDGLL HHHHHHHHHHCCCCCEEEEEEHHHHCCCCCHHECCCHHHHHCEEEECCCCCCCCCCCCEE HVVVSNKTPLSAYRAPGRYEGTFARERLLDLAAEQIGISQVEIRRRNLLTEADLPFAPGM EEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCC DICFEPYHFDSGDVVDHLDKALESAGFDDWEREAAELRAQGRLVGNGIGMLMDKAGLGLY CCEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCHHHHHHHCCCCEE ETSAIDVDASGRIRVRTGASSVGQGIETVLAQIVADELQVDPELIDVVHGDTELVPEGVG ECCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHCCCCCC SWSSRSTVLAGGAARQAALDTLAKAKRLASEMLEANVDDLILVDGRIVVSGLEQQGLSLA CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECHHHHCCHHH EIAGRWDGWSARLANDEPGLGAQAVYLDEHMNYPYGVTLVQIEIDPATGGHTLRRFLTST HHHCCCCCCEEEECCCCCCCCEEEEEEHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHC EAGRAINPMTTRGQVIGAAAQGIGGALYEEFLYDESGQPLATSFMDYLLPTSLDVPDVDF CCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCE FMTEDAPTPNNPFGAKGLGEVGLIAVGAAIAGAIDDAFGEGVRTIKVPVPPETLWRRSHS EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCC IAFSDEPESM EEECCCCCCC >Mature Secondary Structure SRPGASGGLGPSAKRYVGQPVRRREDARLLRGDARFVDDVDIHGQLYMSVVRSSEAHAR CCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEE IVSVEPSAARRAPGVRLVITADDIDAEVPLEQIGYHEVYPQIDDYLHPVFAGDRVRYVGQ EEEECCHHHHCCCCEEEEEEECCCCCCCCHHHCCCHHHCCCHHHHHCHHHCCCEEEECCC PVAAVIADTPYLAEDAAGLVEVTYDLLPPVLDPQYALTDEAEPLFEGQSNEAVRIVKAYG CHHHHHCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEHHHH DVADAFKKAAHVVKGRYVVGRHSGVPMETRGCIAEPDRGRKQLFMWGPVHTHDCQRLIAQ HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHH VLELPLADLRMKHVDIGGNFGVKGGVFPEYIMVGWAAMRLGRPVKWTEDRLEHMVANAHA HHHCCHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH REQVHEMAAAFDADGVLLALKDEIWHNHGAFIRQAEPLVSDITVGMVPGPYRVPAYDGLL HHHHHHHHHHCCCCCEEEEEEHHHHCCCCCHHECCCHHHHHCEEEECCCCCCCCCCCCEE HVVVSNKTPLSAYRAPGRYEGTFARERLLDLAAEQIGISQVEIRRRNLLTEADLPFAPGM EEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCC DICFEPYHFDSGDVVDHLDKALESAGFDDWEREAAELRAQGRLVGNGIGMLMDKAGLGLY CCEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCHHHHHHHCCCCEE ETSAIDVDASGRIRVRTGASSVGQGIETVLAQIVADELQVDPELIDVVHGDTELVPEGVG ECCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHCCCCCC SWSSRSTVLAGGAARQAALDTLAKAKRLASEMLEANVDDLILVDGRIVVSGLEQQGLSLA CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECHHHHCCHHH EIAGRWDGWSARLANDEPGLGAQAVYLDEHMNYPYGVTLVQIEIDPATGGHTLRRFLTST HHHCCCCCCEEEECCCCCCCCEEEEEEHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHC EAGRAINPMTTRGQVIGAAAQGIGGALYEEFLYDESGQPLATSFMDYLLPTSLDVPDVDF CCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCE FMTEDAPTPNNPFGAKGLGEVGLIAVGAAIAGAIDDAFGEGVRTIKVPVPPETLWRRSHS EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCC IAFSDEPESM EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]