| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
Click here to switch to the map view.
The map label for this gene is 119386539
Identifier: 119386539
GI number: 119386539
Start: 968083
End: 968589
Strand: Direct
Name: 119386539
Synonym: Pden_3832
Alternate gene names: NA
Gene position: 968083-968589 (Clockwise)
Preceding gene: 119386538
Following gene: 119386541
Centisome position: 55.96
GC content: 64.69
Gene sequence:
>507_bases ATGATGACTTATCTGCTCAGCGATTATCCGGTCTTGGCGCGGCTCGCGGCCGGCAGAACCACGGCTACGCGGCTTGACGT CCGCGCCTGCCGCCGACTCTACGCACTGGCGACGGCCGCCGATCTGGGCGCGATGGGGCCGGAAGAGCGCGGGCTTTACG ACAGCTTGGCCGCGAGCGAACCGGTGCCGGGTTCCGGCGGGCCGATTGCAGCGCTTCAGGCGCAGGTCAGGGCTGATGGT TTCCGGCGCATGGCCGATGAAAAGGCCTTCATGGACGATCTGTCCGGGGAGCCGGACATGGTTCCCGGCCCCTTCAGGGT GAAATGTCTGCTTTGTGGCGATGTGGCGGAAAGCTGGCATCGCGACTGTCCCGCGCCCGCAAAGGCAAGGATCGGCGTGG CCAGTTGCGCATGCGGGAATGTCAGTGCCGATTCGATGGGGTTTCTGGGCTATGGGCGCATCCTCTCGCGCCAACCCGAT AGTTTCGAGGTGCTGGATCTTACCTGA
Upstream 100 bases:
>100_bases GAGCGGCATTTGTGACCAGCATGGGTCTGTGCGATGGCACGATGCTCGAAGGGTAAAATTGCAATGTTGGCATATGCGCC CCTTGGGCGTGGAGAGCTTG
Downstream 100 bases:
>100_bases TCCGGGTGGTGCAAAGCTGTCCTGCGCCGGCTGTAGACCATGGCCCGAAGTGGGCTACTTTTCGCGATTTCGCCAAATAT TAGTGACCGACTATTATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MMTYLLSDYPVLARLAAGRTTATRLDVRACRRLYALATAADLGAMGPEERGLYDSLAASEPVPGSGGPIAALQAQVRADG FRRMADEKAFMDDLSGEPDMVPGPFRVKCLLCGDVAESWHRDCPAPAKARIGVASCACGNVSADSMGFLGYGRILSRQPD SFEVLDLT
Sequences:
>Translated_168_residues MMTYLLSDYPVLARLAAGRTTATRLDVRACRRLYALATAADLGAMGPEERGLYDSLAASEPVPGSGGPIAALQAQVRADG FRRMADEKAFMDDLSGEPDMVPGPFRVKCLLCGDVAESWHRDCPAPAKARIGVASCACGNVSADSMGFLGYGRILSRQPD SFEVLDLT >Mature_168_residues MMTYLLSDYPVLARLAAGRTTATRLDVRACRRLYALATAADLGAMGPEERGLYDSLAASEPVPGSGGPIAALQAQVRADG FRRMADEKAFMDDLSGEPDMVPGPFRVKCLLCGDVAESWHRDCPAPAKARIGVASCACGNVSADSMGFLGYGRILSRQPD SFEVLDLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17862; Mature: 17862
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTYLLSDYPVLARLAAGRTTATRLDVRACRRLYALATAADLGAMGPEERGLYDSLAASE CCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCC PVPGSGGPIAALQAQVRADGFRRMADEKAFMDDLSGEPDMVPGPFRVKCLLCGDVAESWH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECHHHHHHH RDCPAPAKARIGVASCACGNVSADSMGFLGYGRILSRQPDSFEVLDLT HCCCCCCHHCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECC >Mature Secondary Structure MMTYLLSDYPVLARLAAGRTTATRLDVRACRRLYALATAADLGAMGPEERGLYDSLAASE CCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCC PVPGSGGPIAALQAQVRADGFRRMADEKAFMDDLSGEPDMVPGPFRVKCLLCGDVAESWH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECHHHHHHH RDCPAPAKARIGVASCACGNVSADSMGFLGYGRILSRQPDSFEVLDLT HCCCCCCHHCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA