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The map label for this gene is atpH [H]

Identifier: 119386522

GI number: 119386522

Start: 954784

End: 955419

Strand: Direct

Name: atpH [H]

Synonym: Pden_3815

Alternate gene names: 119386522

Gene position: 954784-955419 (Clockwise)

Preceding gene: 119386521

Following gene: 119386523

Centisome position: 55.19

GC content: 66.04

Gene sequence:

>636_bases
TTGACCCGCGCTCCGCGACAGACCGGCCCGCCAGCCGGCCCGCCAGCGGAGCTTGCGCTAACCGGAAGGATGACCGTGGC
CAATTCCGCTTCGATTTCCGCTGATATCGCCGGGCGTTACGCGCAGGCCCTGTTCGATCTGGTCAGGGACTCGGGCGGCA
TCGACGCCCTGTCCTCCCAGATCGACGATCTGGCCTCGGCCTATGACGCCAGCCAGGACCTGCGCGACCTGACCCTCTCG
CCCCTTTACGACCGCCAGCAGCAAGAGGCCGCGGTCGGCGCGCTGTCCGAGCGCATGGGCCTGTCGGCCGAGCTGGCCAA
CACCCTGCGCCTGCTGGCCCGCAACCGCCGGCTGTTCACGCTGCCGCAATTCGTGGCCAAGCTGCGCAACCTGATCGCGG
ATGCGAAGGGCGAAGTCACCGCCGACGTGGTCAGCGCCCAGGCGCTGACGGACGAACAGAAGGCCCGGCTTGCCGATACG
CTGGCCGCGAAATCGGGCAAGACGGTGAAACTGAACGCGCGCGTCGATGAAAGCCTCATCGGCGGCATGATCGTCAAACT
GGGCTCGCAGATGATCGACAGTTCGATCCGCTCGAAGCTCGCCTCCCTCCAGAATGCTATGAAAGAGGTCGGATAA

Upstream 100 bases:

>100_bases
CATTTTTCCGTGTTCAAGGCGGTTGCGGCAGGGAAAATCACCTGCTAGAGACGCCGCAGATTTCGGGAAGGCTCTAGCCG
AATTATGCCAGGGCCCGCCC

Downstream 100 bases:

>100_bases
TGGGAATCCAGGCAGCCGAAATCTCGGCCATCCTCAAGGATCAGATCAAGAATTTCGGTCAGGACGCCGAGGTGGCCGAG
GTCGGGCAGGTGCTGTCCGT

Product: ATP synthase F1, delta subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTRAPRQTGPPAGPPAELALTGRMTVANSASISADIAGRYAQALFDLVRDSGGIDALSSQIDDLASAYDASQDLRDLTLS
PLYDRQQQEAAVGALSERMGLSAELANTLRLLARNRRLFTLPQFVAKLRNLIADAKGEVTADVVSAQALTDEQKARLADT
LAAKSGKTVKLNARVDESLIGGMIVKLGSQMIDSSIRSKLASLQNAMKEVG

Sequences:

>Translated_211_residues
MTRAPRQTGPPAGPPAELALTGRMTVANSASISADIAGRYAQALFDLVRDSGGIDALSSQIDDLASAYDASQDLRDLTLS
PLYDRQQQEAAVGALSERMGLSAELANTLRLLARNRRLFTLPQFVAKLRNLIADAKGEVTADVVSAQALTDEQKARLADT
LAAKSGKTVKLNARVDESLIGGMIVKLGSQMIDSSIRSKLASLQNAMKEVG
>Mature_210_residues
TRAPRQTGPPAGPPAELALTGRMTVANSASISADIAGRYAQALFDLVRDSGGIDALSSQIDDLASAYDASQDLRDLTLSP
LYDRQQQEAAVGALSERMGLSAELANTLRLLARNRRLFTLPQFVAKLRNLIADAKGEVTADVVSAQALTDEQKARLADTL
AAKSGKTVKLNARVDESLIGGMIVKLGSQMIDSSIRSKLASLQNAMKEVG

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

Organism=Homo sapiens, GI4502303, Length=177, Percent_Identity=27.1186440677966, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1790173, Length=175, Percent_Identity=26.8571428571429, Blast_Score=72, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71984717, Length=174, Percent_Identity=29.3103448275862, Blast_Score=95, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71984710, Length=174, Percent_Identity=29.3103448275862, Blast_Score=95, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6320504, Length=179, Percent_Identity=26.2569832402235, Blast_Score=62, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24647054, Length=165, Percent_Identity=30.9090909090909, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24647056, Length=107, Percent_Identity=35.5140186915888, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711
- InterPro:   IPR020781 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 22354; Mature: 22223

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAPRQTGPPAGPPAELALTGRMTVANSASISADIAGRYAQALFDLVRDSGGIDALSSQ
CCCCCCCCCCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IDDLASAYDASQDLRDLTLSPLYDRQQQEAAVGALSERMGLSAELANTLRLLARNRRLFT
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH
LPQFVAKLRNLIADAKGEVTADVVSAQALTDEQKARLADTLAAKSGKTVKLNARVDESLI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
GGMIVKLGSQMIDSSIRSKLASLQNAMKEVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRAPRQTGPPAGPPAELALTGRMTVANSASISADIAGRYAQALFDLVRDSGGIDALSSQ
CCCCCCCCCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IDDLASAYDASQDLRDLTLSPLYDRQQQEAAVGALSERMGLSAELANTLRLLARNRRLFT
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH
LPQFVAKLRNLIADAKGEVTADVVSAQALTDEQKARLADTLAAKSGKTVKLNARVDESLI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
GGMIVKLGSQMIDSSIRSKLASLQNAMKEVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA