| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is cmk [H]
Identifier: 119386491
GI number: 119386491
Start: 920022
End: 920606
Strand: Direct
Name: cmk [H]
Synonym: Pden_3784
Alternate gene names: 119386491
Gene position: 920022-920606 (Clockwise)
Preceding gene: 119386488
Following gene: 119386492
Centisome position: 53.18
GC content: 73.5
Gene sequence:
>585_bases ATGTCCTTTACCATCGCTATCGACGGACCCGCCGCTTCGGGCAAGGGGACGATCGCGCGGGCGCTTGCCCGGCATTTCGG CTTTGCCCATCTGGATACGGGGCTGCTTTATCGCGCCGTCGGCGCCAAGGGCGGCGATCCCGTCGCGGCCGCCCGCGCGC TTGCCCCCGAGGACCTGGCCCGCGACGATCTGCGCAGCGCCGAGGCCGGCCAGGCCGCCAGCCGTGTCGCCGCGATCCCC GAGGTGCGCGCCGCGCTGGTCGAATTCCAGCGCCGCTTCGCCCGCTCCGAGCCGGGCGCGGTGCTGGACGGGCGCGACAT CGGCACGGTGATCTGCCCCGAGGCCGAGCTGAAGCTTTATGTCACGGCCAGCGATGCAGTGCGCGCCCGCCGCCGGGCGC TGGAACTGGGTGCCGACGAGGCCCGGATCCTGGTCGAACTGCGCGAGCGGGACGCCCGCGACGCCGCCCGCGACGTGGCG CCGATGCGCCCGGCCGAGGATGCGCTGCTGCTCGACACCACCGAGATGAGCATCGACGAGGCCGTGGCGCGCGCCATCGC CTGCGCCAAGGAGGCCGGAGCATGA
Upstream 100 bases:
>100_bases GCGGATGCCGCCGGGGTTCCCGCGGATCTGCGGCCTGAACGGTCTCGGGTCCGGCAGGCGGGGTCCCGGCTCTGGCGTCG CCGCCAGAACCTGAGGTCCC
Downstream 100 bases:
>100_bases GCCCGCGCTTCCAGCTTTCCGACCTGCGCGTGCCGGTGATCCAGGCGCCGATGGCCGGCACTGCGACGCCGCATCTTGCC GCCGAGGTCGGCCGGGCAGG
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSFTIAIDGPAASGKGTIARALARHFGFAHLDTGLLYRAVGAKGGDPVAAARALAPEDLARDDLRSAEAGQAASRVAAIP EVRAALVEFQRRFARSEPGAVLDGRDIGTVICPEAELKLYVTASDAVRARRRALELGADEARILVELRERDARDAARDVA PMRPAEDALLLDTTEMSIDEAVARAIACAKEAGA
Sequences:
>Translated_194_residues MSFTIAIDGPAASGKGTIARALARHFGFAHLDTGLLYRAVGAKGGDPVAAARALAPEDLARDDLRSAEAGQAASRVAAIP EVRAALVEFQRRFARSEPGAVLDGRDIGTVICPEAELKLYVTASDAVRARRRALELGADEARILVELRERDARDAARDVA PMRPAEDALLLDTTEMSIDEAVARAIACAKEAGA >Mature_193_residues SFTIAIDGPAASGKGTIARALARHFGFAHLDTGLLYRAVGAKGGDPVAAARALAPEDLARDDLRSAEAGQAASRVAAIPE VRAALVEFQRRFARSEPGAVLDGRDIGTVICPEAELKLYVTASDAVRARRRALELGADEARILVELRERDARDAARDVAP MRPAEDALLLDTTEMSIDEAVARAIACAKEAGA
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787139, Length=218, Percent_Identity=38.5321100917431, Blast_Score=132, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000850 - InterPro: IPR003136 - InterPro: IPR011994 [H]
Pfam domain/function: PF00406 ADK; PF02224 Cytidylate_kin [H]
EC number: =2.7.4.14 [H]
Molecular weight: Translated: 20430; Mature: 20299
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTIAIDGPAASGKGTIARALARHFGFAHLDTGLLYRAVGAKGGDPVAAARALAPEDLA CEEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHH RDDLRSAEAGQAASRVAAIPEVRAALVEFQRRFARSEPGAVLDGRDIGTVICPEAELKLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEECCCCCEEEE VTASDAVRARRRALELGADEARILVELRERDARDAARDVAPMRPAEDALLLDTTEMSIDE EECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHH AVARAIACAKEAGA HHHHHHHHHHHCCC >Mature Secondary Structure SFTIAIDGPAASGKGTIARALARHFGFAHLDTGLLYRAVGAKGGDPVAAARALAPEDLA EEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHH RDDLRSAEAGQAASRVAAIPEVRAALVEFQRRFARSEPGAVLDGRDIGTVICPEAELKLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEECCCCCEEEE VTASDAVRARRRALELGADEARILVELRERDARDAARDVAPMRPAEDALLLDTTEMSIDE EECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHH AVARAIACAKEAGA HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10511537 [H]