| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386469
Identifier: 119386469
GI number: 119386469
Start: 898985
End: 900016
Strand: Direct
Name: 119386469
Synonym: Pden_3762
Alternate gene names: NA
Gene position: 898985-900016 (Clockwise)
Preceding gene: 119386468
Following gene: 119386470
Centisome position: 51.96
GC content: 65.5
Gene sequence:
>1032_bases ATGGCCGAGCTGAACATCCAGAATCCGGGCCTTGTCGATATCCTGTCGCGCACGGACCCGGACGGCAAGATCGCCAACAT CATCGAGCTTGCCGAGAAATCGAACCCGATCCTCAAGGATGCGGTGTTCACCGAGTGCAACGACGGCACCAAGCACCAGC ACGTCATCCGCACCGGCATTCCCGAGCCGGCATGGCGCCGCTACAACGCCGGCGTCAAGCAGGGCAAGACCACCACCGCC AAGGTCGTGGATACCACTGGCATGGCCGAAGAGTTCTCGGTCGTCGACGAGGCGCTTGCCAAGCTGAACGGCAACGAGGC CGCGTTCCGCGCGTCCGAGATGTCGGGCCTGATCGAAGGCTTCAACCAGTTCATGGCGCGGAACATGATCTATGGCTCGA CCGCCGTGACCCCCGACGGGTTCATGGGGCTGGACGTGCGCTACGACGATCCCGCCGTGGCTTCGGGCCGCCAGCTGATC AATGCCGGCGGCACCGGCTCCGACAACACCTCGATCTGGTTCGTGACCTGGGGGCCGCGCGCCACCACGCTGCTTTACCC CAAGGGCTCGGCGGCCGGCCTGTCTCACAAGGACATGGGCGCCCAGCTCTGGGATGCACAGGATGGCAGCGGCAAGTTCC GCGCCCTCGTCGACCACCTGAAATGGGACATGGGCCTGTCGGTGGGCGACTGGCGCGGCAACGCGCGGATCTGCAACATC GACGTGTCGGCGCTGACCAAGGACGCGGCGACCGGCGCCGACCTGCTCGACCTGATGATCGACGCCGAGGAGATGATCGA CACGGCCAGCCGCGTCGGCATCGACAGCAAGGGCAACCTCGTCGAGGGCAAGACCGTCATCTATGTCGGCCGCACCGTTG CGAAGTTCCTGCGCAAGCAGGCGCTGAACAAGAAGAACGTCCAGCTGCGGGTCGAGGAAGTCGCCGGCGAGCGCGTCACC ATGTGGGGCGACATGCCGGTGCGCCGCCTGGACGCGATCAGCAACGCCGAGGCTGCCATCGTCTTCCCGTAA
Upstream 100 bases:
>100_bases GGTGGCCGACACCACTGTCGTCAACGGACAGGCAGGCACTTCGACGCGCCGGAACTTCGCCGACGCGCTCTATGGCAACG GCAACGGAAAGGAATAACCC
Downstream 100 bases:
>100_bases GAACAGGCCCGGCTCCGAGCGGGCCGGGCTTCACCACAACCCCGACAGGAGGATGCCATGCATCTCGACGCACAAAACCT GTTCTCGGACGCGCAGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MAELNIQNPGLVDILSRTDPDGKIANIIELAEKSNPILKDAVFTECNDGTKHQHVIRTGIPEPAWRRYNAGVKQGKTTTA KVVDTTGMAEEFSVVDEALAKLNGNEAAFRASEMSGLIEGFNQFMARNMIYGSTAVTPDGFMGLDVRYDDPAVASGRQLI NAGGTGSDNTSIWFVTWGPRATTLLYPKGSAAGLSHKDMGAQLWDAQDGSGKFRALVDHLKWDMGLSVGDWRGNARICNI DVSALTKDAATGADLLDLMIDAEEMIDTASRVGIDSKGNLVEGKTVIYVGRTVAKFLRKQALNKKNVQLRVEEVAGERVT MWGDMPVRRLDAISNAEAAIVFP
Sequences:
>Translated_343_residues MAELNIQNPGLVDILSRTDPDGKIANIIELAEKSNPILKDAVFTECNDGTKHQHVIRTGIPEPAWRRYNAGVKQGKTTTA KVVDTTGMAEEFSVVDEALAKLNGNEAAFRASEMSGLIEGFNQFMARNMIYGSTAVTPDGFMGLDVRYDDPAVASGRQLI NAGGTGSDNTSIWFVTWGPRATTLLYPKGSAAGLSHKDMGAQLWDAQDGSGKFRALVDHLKWDMGLSVGDWRGNARICNI DVSALTKDAATGADLLDLMIDAEEMIDTASRVGIDSKGNLVEGKTVIYVGRTVAKFLRKQALNKKNVQLRVEEVAGERVT MWGDMPVRRLDAISNAEAAIVFP >Mature_342_residues AELNIQNPGLVDILSRTDPDGKIANIIELAEKSNPILKDAVFTECNDGTKHQHVIRTGIPEPAWRRYNAGVKQGKTTTAK VVDTTGMAEEFSVVDEALAKLNGNEAAFRASEMSGLIEGFNQFMARNMIYGSTAVTPDGFMGLDVRYDDPAVASGRQLIN AGGTGSDNTSIWFVTWGPRATTLLYPKGSAAGLSHKDMGAQLWDAQDGSGKFRALVDHLKWDMGLSVGDWRGNARICNID VSALTKDAATGADLLDLMIDAEEMIDTASRVGIDSKGNLVEGKTVIYVGRTVAKFLRKQALNKKNVQLRVEEVAGERVTM WGDMPVRRLDAISNAEAAIVFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37119; Mature: 36988
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELNIQNPGLVDILSRTDPDGKIANIIELAEKSNPILKDAVFTECNDGTKHQHVIRTGI CCCCCCCCCCCEEHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHCCCC PEPAWRRYNAGVKQGKTTTAKVVDTTGMAEEFSVVDEALAKLNGNEAAFRASEMSGLIEG CCHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FNQFMARNMIYGSTAVTPDGFMGLDVRYDDPAVASGRQLINAGGTGSDNTSIWFVTWGPR HHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHCCCCEEECCCCCCCCCEEEEEEECCC ATTLLYPKGSAAGLSHKDMGAQLWDAQDGSGKFRALVDHLKWDMGLSVGDWRGNARICNI EEEEEECCCCCCCCCCHHCCCEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEEE DVSALTKDAATGADLLDLMIDAEEMIDTASRVGIDSKGNLVEGKTVIYVGRTVAKFLRKQ EHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCEECCCEEEEECHHHHHHHHHH ALNKKNVQLRVEEVAGERVTMWGDMPVRRLDAISNAEAAIVFP HCCCCCCEEEEEECCCCEEEEECCCCHHHHHHCCCCCEEEECC >Mature Secondary Structure AELNIQNPGLVDILSRTDPDGKIANIIELAEKSNPILKDAVFTECNDGTKHQHVIRTGI CCCCCCCCCCEEHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHCCCC PEPAWRRYNAGVKQGKTTTAKVVDTTGMAEEFSVVDEALAKLNGNEAAFRASEMSGLIEG CCHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FNQFMARNMIYGSTAVTPDGFMGLDVRYDDPAVASGRQLINAGGTGSDNTSIWFVTWGPR HHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHCCCCEEECCCCCCCCCEEEEEEECCC ATTLLYPKGSAAGLSHKDMGAQLWDAQDGSGKFRALVDHLKWDMGLSVGDWRGNARICNI EEEEEECCCCCCCCCCHHCCCEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEEE DVSALTKDAATGADLLDLMIDAEEMIDTASRVGIDSKGNLVEGKTVIYVGRTVAKFLRKQ EHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCEECCCEEEEECHHHHHHHHHH ALNKKNVQLRVEEVAGERVTMWGDMPVRRLDAISNAEAAIVFP HCCCCCCEEEEEECCCCEEEEECCCCHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA