| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386468
Identifier: 119386468
GI number: 119386468
Start: 898325
End: 898981
Strand: Direct
Name: 119386468
Synonym: Pden_3761
Alternate gene names: NA
Gene position: 898325-898981 (Clockwise)
Preceding gene: 119386467
Following gene: 119386469
Centisome position: 51.92
GC content: 68.34
Gene sequence:
>657_bases ATGAGTGAGGAAGCCAATGCCTCGACCGATACCACCGAAGCCACCGCGGCGGCCGCCACCGAAGAGGCCGGCGCCGATGT GACGGATACCGCCGCGACTGCGGATGCGGCTGCCGAGCAAGAGGGCGCCGAGGGCAAGGATGCCGAAAAGGCCGGCGACG CCGAGGCGGGCGCCGAACCCTTCTCCCTCGCGGCACCGGAGGGGGCCGAGGCGTTCCAGGCGGATTTCGATGCCTTCGCC GGCGACATGGACGCATGGCTCAAGGCGAATCCGAACGCCACGGCGCGCGATGCGCTGACCGAGGCGGCGATGCGCCAGGC GCGGCTCGCGGGCGATGCCCAAAAGCAGATGATCACGCAGCGCGATGCCCAGCTGGATGCCTGGGCCGGCGATCTGCGCA AGGACACCGAGTTCGGGGGCGAGAAATACGACGCCAACGTCGCCACGGCCATCAAGGGCCTGGAGGCGGTCGGCACGCCC GAACTGCGGCAATTGCTCGACGAAACCGGGCTGGGCAGCCACCCGGACGTTGTGCGCGCCTTCTGGAAGGTGGGGCAGAT GGTGGCCGACACCACTGTCGTCAACGGACAGGCAGGCACTTCGACGCGCCGGAACTTCGCCGACGCGCTCTATGGCAACG GCAACGGAAAGGAATAA
Upstream 100 bases:
>100_bases CATGACGTGCGCGCCTTCGCCGCCATGCAGATCGAACACGCCGAGCTGATGGATCGCATCCAGCTCGCCGCCGAACAGCA AGCCGAGAAGGAAACAGCTG
Downstream 100 bases:
>100_bases CCCATGGCCGAGCTGAACATCCAGAATCCGGGCCTTGTCGATATCCTGTCGCGCACGGACCCGGACGGCAAGATCGCCAA CATCATCGAGCTTGCCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSEEANASTDTTEATAAAATEEAGADVTDTAATADAAAEQEGAEGKDAEKAGDAEAGAEPFSLAAPEGAEAFQADFDAFA GDMDAWLKANPNATARDALTEAAMRQARLAGDAQKQMITQRDAQLDAWAGDLRKDTEFGGEKYDANVATAIKGLEAVGTP ELRQLLDETGLGSHPDVVRAFWKVGQMVADTTVVNGQAGTSTRRNFADALYGNGNGKE
Sequences:
>Translated_218_residues MSEEANASTDTTEATAAAATEEAGADVTDTAATADAAAEQEGAEGKDAEKAGDAEAGAEPFSLAAPEGAEAFQADFDAFA GDMDAWLKANPNATARDALTEAAMRQARLAGDAQKQMITQRDAQLDAWAGDLRKDTEFGGEKYDANVATAIKGLEAVGTP ELRQLLDETGLGSHPDVVRAFWKVGQMVADTTVVNGQAGTSTRRNFADALYGNGNGKE >Mature_217_residues SEEANASTDTTEATAAAATEEAGADVTDTAATADAAAEQEGAEGKDAEKAGDAEAGAEPFSLAAPEGAEAFQADFDAFAG DMDAWLKANPNATARDALTEAAMRQARLAGDAQKQMITQRDAQLDAWAGDLRKDTEFGGEKYDANVATAIKGLEAVGTPE LRQLLDETGLGSHPDVVRAFWKVGQMVADTTVVNGQAGTSTRRNFADALYGNGNGKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22549; Mature: 22418
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEANASTDTTEATAAAATEEAGADVTDTAATADAAAEQEGAEGKDAEKAGDAEAGAEP CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCC FSLAAPEGAEAFQADFDAFAGDMDAWLKANPNATARDALTEAAMRQARLAGDAQKQMITQ CCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH RDAQLDAWAGDLRKDTEFGGEKYDANVATAIKGLEAVGTPELRQLLDETGLGSHPDVVRA HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHH FWKVGQMVADTTVVNGQAGTSTRRNFADALYGNGNGKE HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SEEANASTDTTEATAAAATEEAGADVTDTAATADAAAEQEGAEGKDAEKAGDAEAGAEP CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCC FSLAAPEGAEAFQADFDAFAGDMDAWLKANPNATARDALTEAAMRQARLAGDAQKQMITQ CCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH RDAQLDAWAGDLRKDTEFGGEKYDANVATAIKGLEAVGTPELRQLLDETGLGSHPDVVRA HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHH FWKVGQMVADTTVVNGQAGTSTRRNFADALYGNGNGKE HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA