Click here to switch to the map view.

The map label for this gene is 119386384

Identifier: 119386384

GI number: 119386384

Start: 824528

End: 825211

Strand: Direct

Name: 119386384

Synonym: Pden_3676

Alternate gene names: NA

Gene position: 824528-825211 (Clockwise)

Preceding gene: 119386381

Following gene: 119386385

Centisome position: 47.66

GC content: 72.66

Gene sequence:

>684_bases
ATGGACAGGATTCTGGTCGGAGGCGACATTCCGGTGACGCTGCGGCGCTCGGCCCGCGCGCGTCGCATGACCCTGCGCGT
GGCGCGCGCGGGCGGCGAGGTGGTGCTGACCCTGCCCAGCCGCGCCAGCCTGTCCGATGGTCGCGCCTTTGCCGAGTCGC
GGGCCGAATGGCTGCGCCAGACCCGGGCCGGGATGCCGCCGCTGCGCCTGGTGGATCATGGCGCCCTGCTGCCCGTCGAG
GGCCGCCAGCGGCGGATCCTGCCCCATGGCGGGCGCCGGGTGGAACTGGCGGACGAGGCGCTGCTGGTGCCGCAGGGCCG
TCCCCCCGGCGTGCTGGTCGAGACCTGGCTGAAGCATCTGGCGCAGGCACGGCTGATTTCGGCCTGCGGCCGCCATGCCG
AGGCGCTGGGGCGGGGCTTTCGCGCGCTCGCGCTGCGCGATACCCGCTCGCGCTGGGGCAGCTGCACCCATGACGGGCGG
CTGATGTTTTCGTGGCGGTTGGCCATGGCGCCGCCCGAGGTGTTGGACTATGTCGCCGCGCATGAGGTGGCGCATCTGCT
GCATATGGATCACTCCGCCGCCTTCTGGGCCGCGACCGGCCGGTTGAGGCCCGATTATGCGCGCCATCGCGACTGGCTGC
GCCAGCATGGGCATGAACTGCTGGCCTGGCGCTTCCGCTCCTGA

Upstream 100 bases:

>100_bases
AGCCGGGGCAGGCTGTCAAAGCCTTTTCCCCCTTGCAGGCCGGTAGCGGTGCGGGGGAAACATGGGCAGAGGGGCGGCCC
TTCGCAAGATGCGGGAAAAT

Downstream 100 bases:

>100_bases
CCGGGGCGGCTTGACGGCGGCCGGATTTGTGATCACAGATGGCGCATGACTGTTACGCGTTCCTCGGAAAGTTCGGCCCA
TGAGCGGCTTTATCGCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc-Dependent Protease; Zinc Protease; Zinc Metallopeptidases-Like Protein; Conserved Metal-Dependent Hydrolase; Metalloprotease; Zinc Metallopeptidase-Like Protein; Peptidase; Zinc Metallopeptidase Protein; Protease

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MDRILVGGDIPVTLRRSARARRMTLRVARAGGEVVLTLPSRASLSDGRAFAESRAEWLRQTRAGMPPLRLVDHGALLPVE
GRQRRILPHGGRRVELADEALLVPQGRPPGVLVETWLKHLAQARLISACGRHAEALGRGFRALALRDTRSRWGSCTHDGR
LMFSWRLAMAPPEVLDYVAAHEVAHLLHMDHSAAFWAATGRLRPDYARHRDWLRQHGHELLAWRFRS

Sequences:

>Translated_227_residues
MDRILVGGDIPVTLRRSARARRMTLRVARAGGEVVLTLPSRASLSDGRAFAESRAEWLRQTRAGMPPLRLVDHGALLPVE
GRQRRILPHGGRRVELADEALLVPQGRPPGVLVETWLKHLAQARLISACGRHAEALGRGFRALALRDTRSRWGSCTHDGR
LMFSWRLAMAPPEVLDYVAAHEVAHLLHMDHSAAFWAATGRLRPDYARHRDWLRQHGHELLAWRFRS
>Mature_227_residues
MDRILVGGDIPVTLRRSARARRMTLRVARAGGEVVLTLPSRASLSDGRAFAESRAEWLRQTRAGMPPLRLVDHGALLPVE
GRQRRILPHGGRRVELADEALLVPQGRPPGVLVETWLKHLAQARLISACGRHAEALGRGFRALALRDTRSRWGSCTHDGR
LMFSWRLAMAPPEVLDYVAAHEVAHLLHMDHSAAFWAATGRLRPDYARHRDWLRQHGHELLAWRFRS

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25598; Mature: 25598

Theoretical pI: Translated: 12.03; Mature: 12.03

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRILVGGDIPVTLRRSARARRMTLRVARAGGEVVLTLPSRASLSDGRAFAESRAEWLRQ
CCCEEECCCCCEEEHHHHHHHHHHHEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHH
TRAGMPPLRLVDHGALLPVEGRQRRILPHGGRRVELADEALLVPQGRPPGVLVETWLKHL
HHCCCCCEEEECCCCEECCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCHHHHHHHHHH
AQARLISACGRHAEALGRGFRALALRDTRSRWGSCTHDGRLMFSWRLAMAPPEVLDYVAA
HHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHH
HEVAHLLHMDHSAAFWAATGRLRPDYARHRDWLRQHGHELLAWRFRS
HHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHEEECC
>Mature Secondary Structure
MDRILVGGDIPVTLRRSARARRMTLRVARAGGEVVLTLPSRASLSDGRAFAESRAEWLRQ
CCCEEECCCCCEEEHHHHHHHHHHHEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHH
TRAGMPPLRLVDHGALLPVEGRQRRILPHGGRRVELADEALLVPQGRPPGVLVETWLKHL
HHCCCCCEEEECCCCEECCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCHHHHHHHHHH
AQARLISACGRHAEALGRGFRALALRDTRSRWGSCTHDGRLMFSWRLAMAPPEVLDYVAA
HHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHH
HEVAHLLHMDHSAAFWAATGRLRPDYARHRDWLRQHGHELLAWRFRS
HHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA