| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is hflK [H]
Identifier: 119386378
GI number: 119386378
Start: 818872
End: 820071
Strand: Direct
Name: hflK [H]
Synonym: Pden_3670
Alternate gene names: 119386378
Gene position: 818872-820071 (Clockwise)
Preceding gene: 119386377
Following gene: 119386379
Centisome position: 47.33
GC content: 69.83
Gene sequence:
>1200_bases ATGGCAGGACAAGGCCCCTGGGGCGGCGGCGGAGATGATGACAAGGGCGGCAGGCAGCCACCGCAGGGCGGCGGCCAGCG CCCCTGGGGCAGCCCGGGGGGCGGCAAGGACGACAAGCCGCAGGGGCCGCGCCGCGGCGACCAGATCCCCGAGATCGAGG AACTGGTGCGCAAGGGCCAGGACCGGCTGCGCGTGCTGATGGGCGGCAAGGGGCCGGGCGGCGGCAACCGCGGCGGCGGC CCGCGCCGGCCGCAGGGTCCGCAATTCCAGATGAGCCGCGGCACCTGGGGCATCGCCATCCTCGCCGTGGTGGCGGTCTG GGCCTTTTCCAGCTTCTATACCGTCAAGCCCGAGGAACGCGCGGTCGAGCTTTTGTTCGGCAAGCCCGTGGGCACGGGCG AGCCGGGCCTGAACTTCGCGCCCTGGCCCGTCGTCACCGCCGAGGTGGTGCAGGTCTCGGGCGAGCGGACAACGGAAATC GGCACCGGCCGCGCCGGGCCGATGGATTCGGGGCTGATGCTGACCCGCGACCAGAACATCGTCGACATGGCTTATCAGGT GGTCTGGAACATCTCGGACCCCGAGAAATTCCTGTTCAACCTGGCCGATCCCGACGACACGATCCGCGCCGTCTCGGAAT CCGCCATGCGCGACATCGTGGCGCGCTCCGAACTGGCGCCGATCCTGAACCGCGATCGCGGCGCCATCGCCGACGACCTG AAGCTGGCGGTGCAGAACACGCTGAACGATTACGAGGCGGGGATCAACGTGCTGCGCGTCAACCTCGACCGCGCCGACCC GCCGCGTGAGGTGATCGACAGCTTCCGCGAGGTGCAGGCCGCCCAGCAGGAACGCGACCGGCTGGAGAAAGAGGCCGACG CCTATGCGAACCGCGTGCTGGCCAGCGCCCGGGGCGAGGCCGCCGCCGTGATCGAACGCGCCGAAGCCTATCGCGCCGAG GCCGTGAACACCGCCGAGGGCGAGGCCGCGCGCTTCAACTCGGTCTATGACGAATATGTCAAGGCGCCGGAGGTGACACG CCGCCGGATGTATCTGGAAACCATGGAAAAGGTTCTGGGCGGGGTGAACAAGGTCATCCTCGACGGCGAGGCCGGGCAGG GCGTCGTGCCCTATCTGCCGCTGGATCAGCTGCGCAGCGGGGCTGCGGGCGCTCGCAACACCGAGGGGGGGAACCAGTGA
Upstream 100 bases:
>100_bases GTGGGGGCGGCAAATCTGGACAAACCCGTCGCATCGGCTTGATTTTCCGGCCGAAGGCACCAGTTTCAACCACACAGACG TAAAGCGAGGCACGAGATTT
Downstream 100 bases:
>100_bases TGAACCGTGTAATCTCGCTTCTGGCGCTGCCCTTCCTGGTCGTGGTGGCGGTCCTGGTGGTCTCGGCGCTCTATATCGTC GACGTGCGTGAAAAGGCCCT
Product: HflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MAGQGPWGGGGDDDKGGRQPPQGGGQRPWGSPGGGKDDKPQGPRRGDQIPEIEELVRKGQDRLRVLMGGKGPGGGNRGGG PRRPQGPQFQMSRGTWGIAILAVVAVWAFSSFYTVKPEERAVELLFGKPVGTGEPGLNFAPWPVVTAEVVQVSGERTTEI GTGRAGPMDSGLMLTRDQNIVDMAYQVVWNISDPEKFLFNLADPDDTIRAVSESAMRDIVARSELAPILNRDRGAIADDL KLAVQNTLNDYEAGINVLRVNLDRADPPREVIDSFREVQAAQQERDRLEKEADAYANRVLASARGEAAAVIERAEAYRAE AVNTAEGEAARFNSVYDEYVKAPEVTRRRMYLETMEKVLGGVNKVILDGEAGQGVVPYLPLDQLRSGAAGARNTEGGNQ
Sequences:
>Translated_399_residues MAGQGPWGGGGDDDKGGRQPPQGGGQRPWGSPGGGKDDKPQGPRRGDQIPEIEELVRKGQDRLRVLMGGKGPGGGNRGGG PRRPQGPQFQMSRGTWGIAILAVVAVWAFSSFYTVKPEERAVELLFGKPVGTGEPGLNFAPWPVVTAEVVQVSGERTTEI GTGRAGPMDSGLMLTRDQNIVDMAYQVVWNISDPEKFLFNLADPDDTIRAVSESAMRDIVARSELAPILNRDRGAIADDL KLAVQNTLNDYEAGINVLRVNLDRADPPREVIDSFREVQAAQQERDRLEKEADAYANRVLASARGEAAAVIERAEAYRAE AVNTAEGEAARFNSVYDEYVKAPEVTRRRMYLETMEKVLGGVNKVILDGEAGQGVVPYLPLDQLRSGAAGARNTEGGNQ >Mature_398_residues AGQGPWGGGGDDDKGGRQPPQGGGQRPWGSPGGGKDDKPQGPRRGDQIPEIEELVRKGQDRLRVLMGGKGPGGGNRGGGP RRPQGPQFQMSRGTWGIAILAVVAVWAFSSFYTVKPEERAVELLFGKPVGTGEPGLNFAPWPVVTAEVVQVSGERTTEIG TGRAGPMDSGLMLTRDQNIVDMAYQVVWNISDPEKFLFNLADPDDTIRAVSESAMRDIVARSELAPILNRDRGAIADDLK LAVQNTLNDYEAGINVLRVNLDRADPPREVIDSFREVQAAQQERDRLEKEADAYANRVLASARGEAAAVIERAEAYRAEA VNTAEGEAARFNSVYDEYVKAPEVTRRRMYLETMEKVLGGVNKVILDGEAGQGVVPYLPLDQLRSGAAGARNTEGGNQ
Specific function: HflC and HflK govern the stability of phage lambda cII protein and have been proposed to encode or regulate a cII- specific protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=289, Percent_Identity=39.1003460207612, Blast_Score=198, Evalue=5e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 43019; Mature: 42887
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGQGPWGGGGDDDKGGRQPPQGGGQRPWGSPGGGKDDKPQGPRRGDQIPEIEELVRKGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCH DRLRVLMGGKGPGGGNRGGGPRRPQGPQFQMSRGTWGIAILAVVAVWAFSSFYTVKPEER HHEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCEEECCHHH AVELLFGKPVGTGEPGLNFAPWPVVTAEVVQVSGERTTEIGTGRAGPMDSGLMLTRDQNI HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEECCCHH VDMAYQVVWNISDPEKFLFNLADPDDTIRAVSESAMRDIVARSELAPILNRDRGAIADDL HHHHHHHHHCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH KLAVQNTLNDYEAGINVLRVNLDRADPPREVIDSFREVQAAQQERDRLEKEADAYANRVL HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASARGEAAAVIERAEAYRAEAVNTAEGEAARFNSVYDEYVKAPEVTRRRMYLETMEKVLG HHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC GVNKVILDGEAGQGVVPYLPLDQLRSGAAGARNTEGGNQ CCCEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AGQGPWGGGGDDDKGGRQPPQGGGQRPWGSPGGGKDDKPQGPRRGDQIPEIEELVRKGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCH DRLRVLMGGKGPGGGNRGGGPRRPQGPQFQMSRGTWGIAILAVVAVWAFSSFYTVKPEER HHEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCEEECCHHH AVELLFGKPVGTGEPGLNFAPWPVVTAEVVQVSGERTTEIGTGRAGPMDSGLMLTRDQNI HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEECCCHH VDMAYQVVWNISDPEKFLFNLADPDDTIRAVSESAMRDIVARSELAPILNRDRGAIADDL HHHHHHHHHCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH KLAVQNTLNDYEAGINVLRVNLDRADPPREVIDSFREVQAAQQERDRLEKEADAYANRVL HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASARGEAAAVIERAEAYRAEAVNTAEGEAARFNSVYDEYVKAPEVTRRRMYLETMEKVLG HHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC GVNKVILDGEAGQGVVPYLPLDQLRSGAAGARNTEGGNQ CCCEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]