| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is gor [H]
Identifier: 119386377
GI number: 119386377
Start: 817413
End: 818813
Strand: Direct
Name: gor [H]
Synonym: Pden_3669
Alternate gene names: 119386377
Gene position: 817413-818813 (Clockwise)
Preceding gene: 119386376
Following gene: 119386378
Centisome position: 47.25
GC content: 69.31
Gene sequence:
>1401_bases ATGAAATTCGACTACGACCTTTTCGTCATCGGCGGCGGCTCGGGCGGGGTGCGCGCGGCGCGGATCGCGGCCAGCGAATA CGGCGCCCGCGTCGGCCTGGCCGAGGAAAGCCGGATGGGCGGCACCTGCGTCATCCGCGGCTGCGTGCCCAAGAAGCTGA TGATCTTTGCCTCGCAGGCCGGGGCGGCGGCCGCCGAATCGCGCGGCTACGGCTGGCAGGGGGCCGGCGAGGGCCGCTTC GACTGGGCCGAGTTCCACGGCAAACTGGGGCGCGAACTCGACCGGTTGGAGGGTGCCTATACCTCGGGTCTGGTCAATGC CGGGGTCGAGGTCCACATGCAGCGCGCCCGGCTGCACGACGCCCATACGGTCGAGCTGGCGGACGGCCAGCGCCTGACGG CCAAGCATATCCTGATCGCCATCGGCGGGCGGCCGCAGCGGCCCGACATTCCGGGCAAGGAACTGGGGCTGATCTCGGAC GACCTGTTCACGCTGGAGAAACTGCCCGGTCGGGTGCTGGTGGTGGGCGGCGGCTTCATCGCCTGCGAATTCGCCACCAT CCTGCAGGGGCTGGGCAGCGCCACGGTGCTGGCCTATCGCGGCGACGCGGTGCTGCGCGGCTTCGACGGCGAGATGCGCC GCCATGTCACCGAGCAGTTGCGCGCCATCGGCGTCGACGTGCGGCTGGGCACCAATCCGGCGCGGCTGGACCGCGAGGGT GCGGGGGTCCGCGTCACCTTCGAGGACGACAGCAGCGAGATCTTCGACGCGGTGATGTTCGCCACCGGGCGCGTGCCCTA TACCAAGGGGCTGGGGCTCGAGGATGCCGGCGTCAAGCTGGGCCGCAAGGGCGAGATCGTGGTGGACGAATGGTCGCAAA GCTCGGTCCCCTCGATCTTTGCCGTGGGCGACGTGACCGACCGGGTGAACCTGACGCCGGTCGCGATCCGCGAGGGGCAC AGCTTCGCCGACACCGTCTTCGGCGCCCGGCCGCGCAAGGTCGATCATCGGCTGGTGGCCAGCGCCGTCTATACCCGCCC GCATGAACTGGCCACCATCGGCCTGACCGAGGAAGAGGCCGATGCCTGCGGTCCCGCCGATGTCTATGTCGCCAGCTTCC GGCCCATGCGCTCGCTTTTCGCCGGCTCGGATGCGCGGGCGGTGATGAAGCTGATCGTGGATGCGCAGACCGACAAGGTG CTGGGTTGCCACATCTTCGGCCCCGAGGCGGGCGAGATGATCCAGATGATCGCCGTGCCCATGGGCATGGGCGCGACCAA GGCCGATTTCGACGCCGCCATCGCCGTGCACCCGACGCTGGCCGAGGAGCTTGTGACCATGCGCAAGCCTTCGCGCCGGG TGGGGGCGGCAAATCTGGACAAACCCGTCGCATCGGCTTGA
Upstream 100 bases:
>100_bases CCGGGGTGGTTGAACATGGGCTGTTCCTGAATATCTGCGAACTTGCGATCATCGGCTGCCCGGACGGCTCGGTGGTCGAG TTGCGGCGCGAGGACATGGC
Downstream 100 bases:
>100_bases TTTTCCGGCCGAAGGCACCAGTTTCAACCACACAGACGTAAAGCGAGGCACGAGATTTATGGCAGGACAAGGCCCCTGGG GCGGCGGCGGAGATGATGAC
Product: pyridine nucleotide-disulphide oxidoreductase dimerisation region
Products: NA
Alternate protein names: GR; GRase [H]
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MKFDYDLFVIGGGSGGVRAARIAASEYGARVGLAEESRMGGTCVIRGCVPKKLMIFASQAGAAAAESRGYGWQGAGEGRF DWAEFHGKLGRELDRLEGAYTSGLVNAGVEVHMQRARLHDAHTVELADGQRLTAKHILIAIGGRPQRPDIPGKELGLISD DLFTLEKLPGRVLVVGGGFIACEFATILQGLGSATVLAYRGDAVLRGFDGEMRRHVTEQLRAIGVDVRLGTNPARLDREG AGVRVTFEDDSSEIFDAVMFATGRVPYTKGLGLEDAGVKLGRKGEIVVDEWSQSSVPSIFAVGDVTDRVNLTPVAIREGH SFADTVFGARPRKVDHRLVASAVYTRPHELATIGLTEEEADACGPADVYVASFRPMRSLFAGSDARAVMKLIVDAQTDKV LGCHIFGPEAGEMIQMIAVPMGMGATKADFDAAIAVHPTLAEELVTMRKPSRRVGAANLDKPVASA
Sequences:
>Translated_466_residues MKFDYDLFVIGGGSGGVRAARIAASEYGARVGLAEESRMGGTCVIRGCVPKKLMIFASQAGAAAAESRGYGWQGAGEGRF DWAEFHGKLGRELDRLEGAYTSGLVNAGVEVHMQRARLHDAHTVELADGQRLTAKHILIAIGGRPQRPDIPGKELGLISD DLFTLEKLPGRVLVVGGGFIACEFATILQGLGSATVLAYRGDAVLRGFDGEMRRHVTEQLRAIGVDVRLGTNPARLDREG AGVRVTFEDDSSEIFDAVMFATGRVPYTKGLGLEDAGVKLGRKGEIVVDEWSQSSVPSIFAVGDVTDRVNLTPVAIREGH SFADTVFGARPRKVDHRLVASAVYTRPHELATIGLTEEEADACGPADVYVASFRPMRSLFAGSDARAVMKLIVDAQTDKV LGCHIFGPEAGEMIQMIAVPMGMGATKADFDAAIAVHPTLAEELVTMRKPSRRVGAANLDKPVASA >Mature_466_residues MKFDYDLFVIGGGSGGVRAARIAASEYGARVGLAEESRMGGTCVIRGCVPKKLMIFASQAGAAAAESRGYGWQGAGEGRF DWAEFHGKLGRELDRLEGAYTSGLVNAGVEVHMQRARLHDAHTVELADGQRLTAKHILIAIGGRPQRPDIPGKELGLISD DLFTLEKLPGRVLVVGGGFIACEFATILQGLGSATVLAYRGDAVLRGFDGEMRRHVTEQLRAIGVDVRLGTNPARLDREG AGVRVTFEDDSSEIFDAVMFATGRVPYTKGLGLEDAGVKLGRKGEIVVDEWSQSSVPSIFAVGDVTDRVNLTPVAIREGH SFADTVFGARPRKVDHRLVASAVYTRPHELATIGLTEEEADACGPADVYVASFRPMRSLFAGSDARAVMKLIVDAQTDKV LGCHIFGPEAGEMIQMIAVPMGMGATKADFDAAIAVHPTLAEELVTMRKPSRRVGAANLDKPVASA
Specific function: Maintains high levels of reduced glutathione in the cytosol [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI50301238, Length=463, Percent_Identity=39.7408207343413, Blast_Score=286, Evalue=3e-77, Organism=Homo sapiens, GI22035672, Length=450, Percent_Identity=36.8888888888889, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI148277065, Length=460, Percent_Identity=33.4782608695652, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI33519430, Length=460, Percent_Identity=33.4782608695652, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI33519428, Length=460, Percent_Identity=33.4782608695652, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI33519426, Length=460, Percent_Identity=33.4782608695652, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI148277071, Length=460, Percent_Identity=33.4782608695652, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI291045266, Length=430, Percent_Identity=34.1860465116279, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI291045268, Length=427, Percent_Identity=32.0843091334895, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI91199540, Length=458, Percent_Identity=29.9126637554585, Blast_Score=152, Evalue=9e-37, Organism=Escherichia coli, GI1789915, Length=431, Percent_Identity=39.2111368909513, Blast_Score=276, Evalue=1e-75, Organism=Escherichia coli, GI1786307, Length=453, Percent_Identity=28.9183222958057, Blast_Score=153, Evalue=3e-38, Organism=Escherichia coli, GI87081717, Length=450, Percent_Identity=27.7777777777778, Blast_Score=139, Evalue=4e-34, Organism=Escherichia coli, GI87082354, Length=459, Percent_Identity=27.4509803921569, Blast_Score=138, Evalue=8e-34, Organism=Caenorhabditis elegans, GI71983419, Length=439, Percent_Identity=40.3189066059225, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI71983429, Length=439, Percent_Identity=40.3189066059225, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI17557007, Length=474, Percent_Identity=34.5991561181435, Blast_Score=248, Evalue=3e-66, Organism=Caenorhabditis elegans, GI71982272, Length=481, Percent_Identity=30.5613305613306, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI32565766, Length=461, Percent_Identity=31.4533622559653, Blast_Score=168, Evalue=7e-42, Organism=Caenorhabditis elegans, GI17559934, Length=196, Percent_Identity=27.5510204081633, Blast_Score=65, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6325166, Length=463, Percent_Identity=38.4449244060475, Blast_Score=277, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6321091, Length=461, Percent_Identity=27.9826464208243, Blast_Score=142, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6325240, Length=498, Percent_Identity=25.5020080321285, Blast_Score=111, Evalue=2e-25, Organism=Drosophila melanogaster, GI17737741, Length=479, Percent_Identity=36.3256784968685, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI24640553, Length=476, Percent_Identity=34.8739495798319, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI24640551, Length=471, Percent_Identity=35.031847133758, Blast_Score=238, Evalue=5e-63, Organism=Drosophila melanogaster, GI24640549, Length=476, Percent_Identity=34.8739495798319, Blast_Score=238, Evalue=7e-63, Organism=Drosophila melanogaster, GI21358499, Length=459, Percent_Identity=31.1546840958606, Blast_Score=163, Evalue=3e-40,
Paralogues:
None
Copy number: 650 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.7 [H]
Molecular weight: Translated: 49644; Mature: 49644
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFDYDLFVIGGGSGGVRAARIAASEYGARVGLAEESRMGGTCVIRGCVPKKLMIFASQA CCEEEEEEEEECCCCCCEEEEEEHHHHCCEECCCHHCCCCCEEEEECCCCCEEEEEECCC GAAAAESRGYGWQGAGEGRFDWAEFHGKLGRELDRLEGAYTSGLVNAGVEVHMQRARLHD CCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHEEEHHHHCCC AHTVELADGQRLTAKHILIAIGGRPQRPDIPGKELGLISDDLFTLEKLPGRVLVVGGGFI CEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCC ACEFATILQGLGSATVLAYRGDAVLRGFDGEMRRHVTEQLRAIGVDVRLGTNPARLDREG CHHHHHHHHCCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHEEEEEECCCHHHCCCCC AGVRVTFEDDSSEIFDAVMFATGRVPYTKGLGLEDAGVKLGRKGEIVVDEWSQSSVPSIF CCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEE AVGDVTDRVNLTPVAIREGHSFADTVFGARPRKVDHRLVASAVYTRPHELATIGLTEEEA EECCCCCCCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHH DACGPADVYVASFRPMRSLFAGSDARAVMKLIVDAQTDKVLGCHIFGPEAGEMIQMIAVP CCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHC MGMGATKADFDAAIAVHPTLAEELVTMRKPSRRVGAANLDKPVASA CCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKFDYDLFVIGGGSGGVRAARIAASEYGARVGLAEESRMGGTCVIRGCVPKKLMIFASQA CCEEEEEEEEECCCCCCEEEEEEHHHHCCEECCCHHCCCCCEEEEECCCCCEEEEEECCC GAAAAESRGYGWQGAGEGRFDWAEFHGKLGRELDRLEGAYTSGLVNAGVEVHMQRARLHD CCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHEEEHHHHCCC AHTVELADGQRLTAKHILIAIGGRPQRPDIPGKELGLISDDLFTLEKLPGRVLVVGGGFI CEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCC ACEFATILQGLGSATVLAYRGDAVLRGFDGEMRRHVTEQLRAIGVDVRLGTNPARLDREG CHHHHHHHHCCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHEEEEEECCCHHHCCCCC AGVRVTFEDDSSEIFDAVMFATGRVPYTKGLGLEDAGVKLGRKGEIVVDEWSQSSVPSIF CCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEE AVGDVTDRVNLTPVAIREGHSFADTVFGARPRKVDHRLVASAVYTRPHELATIGLTEEEA EECCCCCCCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHH DACGPADVYVASFRPMRSLFAGSDARAVMKLIVDAQTDKVLGCHIFGPEAGEMIQMIAVP CCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHC MGMGATKADFDAAIAVHPTLAEELVTMRKPSRRVGAANLDKPVASA CCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849605; 10984043 [H]