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The map label for this gene is rpiA [H]

Identifier: 119386376

GI number: 119386376

Start: 816691

End: 817416

Strand: Direct

Name: rpiA [H]

Synonym: Pden_3668

Alternate gene names: 119386376

Gene position: 816691-817416 (Clockwise)

Preceding gene: 119386372

Following gene: 119386377

Centisome position: 47.2

GC content: 69.7

Gene sequence:

>726_bases
ATGACCGACCCCGCCATCGCCGACCTTTCCAAGGATGCCGCCGCCCGTGCCGCCGTGGCGCTGGTCGAACCGGGGATGCG
GCTGGGCCTGGGCACTGGCTCGACCGCCGCGATCTTCGTGCGCCGCCTCGCACAGCGGGTCAGCGAGGAGGGGTTCGCGC
TGCGTTGCGCCGCGACCTCGAAGGCGACGGCCGAGCTTGCGACCTCGCTGGGGCTGGGGGTCGAGGAACTGGACGAGATC
GGCTGGCTGGACCTGACCATCGACGGCGCCGACGAGGTTGACCCGGACCTGAACCTGATCAAGGGCGGCGGTGCGGCGCA
TCTGCGCGAAAAGATCGTCGCCACGGCCTCGGAGCGCATGGTGGTCATCGCCGACCAGGGCAAGGTCGTGGACCGGCTGG
GCCAGTTCCACCTGCCGGTCGAGGTGATTCCCTTCGGCTGGCAGGCGACGCGCAAGCTGATCCAGCGCGCGCTGGACCGG
CTGGACCTGACCCAGCGCCCGATCCTGCTGCGCAAGCGCGGCGATGCGCCGCTGCGCACCGACGAGGGCAACCTGATCCT
GGACCTCGCGCTCGAGGCCATCCCGGATGCCGAGGCGCTGGCGGCCGAGCTGTCTTCGATCGCCGGGGTGGTTGAACATG
GGCTGTTCCTGAATATCTGCGAACTTGCGATCATCGGCTGCCCGGACGGCTCGGTGGTCGAGTTGCGGCGCGAGGACATG
GCATGA

Upstream 100 bases:

>100_bases
GGCGTTTCGTCGCGGCCAAAAGACGCAGCCGGCAGTAGCCCATGGCGCGTCTTCTGCGTATAAGGACGCCGAGCCTGCCA
TTCTGCCAAGGATCCCTGCC

Downstream 100 bases:

>100_bases
AATTCGACTACGACCTTTTCGTCATCGGCGGCGGCTCGGGCGGGGTGCGCGCGGCGCGGATCGCGGCCAGCGAATACGGC
GCCCGCGTCGGCCTGGCCGA

Product: ribose 5-phosphate isomerase

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI [H]

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTDPAIADLSKDAAARAAVALVEPGMRLGLGTGSTAAIFVRRLAQRVSEEGFALRCAATSKATAELATSLGLGVEELDEI
GWLDLTIDGADEVDPDLNLIKGGGAAHLREKIVATASERMVVIADQGKVVDRLGQFHLPVEVIPFGWQATRKLIQRALDR
LDLTQRPILLRKRGDAPLRTDEGNLILDLALEAIPDAEALAAELSSIAGVVEHGLFLNICELAIIGCPDGSVVELRREDM
A

Sequences:

>Translated_241_residues
MTDPAIADLSKDAAARAAVALVEPGMRLGLGTGSTAAIFVRRLAQRVSEEGFALRCAATSKATAELATSLGLGVEELDEI
GWLDLTIDGADEVDPDLNLIKGGGAAHLREKIVATASERMVVIADQGKVVDRLGQFHLPVEVIPFGWQATRKLIQRALDR
LDLTQRPILLRKRGDAPLRTDEGNLILDLALEAIPDAEALAAELSSIAGVVEHGLFLNICELAIIGCPDGSVVELRREDM
A
>Mature_240_residues
TDPAIADLSKDAAARAAVALVEPGMRLGLGTGSTAAIFVRRLAQRVSEEGFALRCAATSKATAELATSLGLGVEELDEIG
WLDLTIDGADEVDPDLNLIKGGGAAHLREKIVATASERMVVIADQGKVVDRLGQFHLPVEVIPFGWQATRKLIQRALDRL
DLTQRPILLRKRGDAPLRTDEGNLILDLALEAIPDAEALAAELSSIAGVVEHGLFLNICELAIIGCPDGSVVELRREDMA

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI94536842, Length=230, Percent_Identity=40, Blast_Score=140, Evalue=9e-34,
Organism=Escherichia coli, GI1789280, Length=221, Percent_Identity=42.0814479638009, Blast_Score=139, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17551758, Length=237, Percent_Identity=36.7088607594937, Blast_Score=115, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6324669, Length=242, Percent_Identity=30.9917355371901, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI281364072, Length=212, Percent_Identity=35.377358490566, Blast_Score=109, Evalue=1e-24,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR004788
- InterPro:   IPR020672 [H]

Pfam domain/function: PF00455 DeoR; PF06026 Rib_5-P_isom_A [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 25631; Mature: 25500

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPAIADLSKDAAARAAVALVEPGMRLGLGTGSTAAIFVRRLAQRVSEEGFALRCAATS
CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCC
KATAELATSLGLGVEELDEIGWLDLTIDGADEVDPDLNLIKGGGAAHLREKIVATASERM
HHHHHHHHHHCCCHHHHHHCCEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCE
VVIADQGKVVDRLGQFHLPVEVIPFGWQATRKLIQRALDRLDLTQRPILLRKRGDAPLRT
EEEECCCHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEE
DEGNLILDLALEAIPDAEALAAELSSIAGVVEHGLFLNICELAIIGCPDGSVVELRREDM
CCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHCHHHEEEHEEEEECCCCCEEEHHHHCC
A
C
>Mature Secondary Structure 
TDPAIADLSKDAAARAAVALVEPGMRLGLGTGSTAAIFVRRLAQRVSEEGFALRCAATS
CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCC
KATAELATSLGLGVEELDEIGWLDLTIDGADEVDPDLNLIKGGGAAHLREKIVATASERM
HHHHHHHHHHCCCHHHHHHCCEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCE
VVIADQGKVVDRLGQFHLPVEVIPFGWQATRKLIQRALDRLDLTQRPILLRKRGDAPLRT
EEEECCCHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEE
DEGNLILDLALEAIPDAEALAAELSSIAGVVEHGLFLNICELAIIGCPDGSVVELRREDM
CCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHCHHHEEEHEEEEECCCCCEEEHHHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA