| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386342
Identifier: 119386342
GI number: 119386342
Start: 785338
End: 785877
Strand: Direct
Name: 119386342
Synonym: Pden_3634
Alternate gene names: NA
Gene position: 785338-785877 (Clockwise)
Preceding gene: 119386341
Following gene: 119386343
Centisome position: 45.39
GC content: 68.7
Gene sequence:
>540_bases ATGGCCGGCTTGCGGCGCGTGCTGGTCCTTGGTGCGCTGGTGGTGCTTGGCACCGGCACCGCCGTGGCGCAGCAACAGAA TGGCGGGCCGGCCTTCGACGCCGCGCTTCTGGAGCGATGCCTGTCGGGGACGGAACGCGGCGACGGCCCGGTCGATGCGC GCGAGACCTGCATAGGCGCTGCCGCCGATCCCTGCATGGACAGCCAGGGCGGCTCGACGACGGTCGGCATGTCGGCCTGT CTCGGGAACGAGTTGGACTTGTGGGACGCAAGGCTGAACGAGACCTATCGCGAGGTCATGGCGCAGTCCGAGGCCACGGA CGGGAACATGGCCGAACTGGGCTCGGCCGCCGAAAAGGAATCGCCGCTGCTGCGCGACATGCAACGCAACTGGATCGCTT TCCGCGATACCGCCTGCGGGTTCGAACGCAGCCGCTGGGGCGGCGGCACCGACGGCGGTCCGGCCGGGCTGCATTGTGCG CTGACCCTGACCGCGCGGCAATATCTGTGGCTGGACCAGTATCGCGGCAAGGACATGTAG
Upstream 100 bases:
>100_bases TCAGCCGGCTGTTCCGCGATGCCAAGCTGATGGAGATCGGTGCCGGCACCAGCGAGATCCGCCGCATGCTGATCGGCCGC GAGCTTCTGGGGCTGGCCTG
Downstream 100 bases:
>100_bases GCACCGGGGAGGAGAGGATGCGCAAGGCAGGACTGCTTTTCTGGCTGGCCGCGACCATGGCCGCCCCCGCCGCCTTGGCA GGCGATGCCTCGGGATTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MAGLRRVLVLGALVVLGTGTAVAQQQNGGPAFDAALLERCLSGTERGDGPVDARETCIGAAADPCMDSQGGSTTVGMSAC LGNELDLWDARLNETYREVMAQSEATDGNMAELGSAAEKESPLLRDMQRNWIAFRDTACGFERSRWGGGTDGGPAGLHCA LTLTARQYLWLDQYRGKDM
Sequences:
>Translated_179_residues MAGLRRVLVLGALVVLGTGTAVAQQQNGGPAFDAALLERCLSGTERGDGPVDARETCIGAAADPCMDSQGGSTTVGMSAC LGNELDLWDARLNETYREVMAQSEATDGNMAELGSAAEKESPLLRDMQRNWIAFRDTACGFERSRWGGGTDGGPAGLHCA LTLTARQYLWLDQYRGKDM >Mature_178_residues AGLRRVLVLGALVVLGTGTAVAQQQNGGPAFDAALLERCLSGTERGDGPVDARETCIGAAADPCMDSQGGSTTVGMSACL GNELDLWDARLNETYREVMAQSEATDGNMAELGSAAEKESPLLRDMQRNWIAFRDTACGFERSRWGGGTDGGPAGLHCAL TLTARQYLWLDQYRGKDM
Specific function: Unknown
COG id: COG3755
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19006; Mature: 18874
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLRRVLVLGALVVLGTGTAVAQQQNGGPAFDAALLERCLSGTERGDGPVDARETCIGA CCHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC AADPCMDSQGGSTTVGMSACLGNELDLWDARLNETYREVMAQSEATDGNMAELGSAAEKE CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHC SPLLRDMQRNWIAFRDTACGFERSRWGGGTDGGPAGLHCALTLTARQYLWLDQYRGKDM CHHHHHHHHHHEEHHHCCCCCCHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCC >Mature Secondary Structure AGLRRVLVLGALVVLGTGTAVAQQQNGGPAFDAALLERCLSGTERGDGPVDARETCIGA CHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC AADPCMDSQGGSTTVGMSACLGNELDLWDARLNETYREVMAQSEATDGNMAELGSAAEKE CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHC SPLLRDMQRNWIAFRDTACGFERSRWGGGTDGGPAGLHCALTLTARQYLWLDQYRGKDM CHHHHHHHHHHEEHHHCCCCCCHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA