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The map label for this gene is ctb [H]

Identifier: 119386322

GI number: 119386322

Start: 769733

End: 770155

Strand: Direct

Name: ctb [H]

Synonym: Pden_3614

Alternate gene names: 119386322

Gene position: 769733-770155 (Clockwise)

Preceding gene: 119386321

Following gene: 119386323

Centisome position: 44.49

GC content: 70.69

Gene sequence:

>423_bases
GTGCGGGTCCATATCCGCCGCATGATCCCGCCGCGCTTTGACGTCACCCCCGAACAGATCGACCGCGTCGTCGCCACCTT
CTACGCCGCGATCCGCCGGCACGAGGTGCTGGGCCCGGTCTTTGCCGGCCATGTCGCCGACTGGCCCGAGCACGAGGCCA
AGATCGCCCGCTTCTGGCGCAACGCCATCCTGTACGAGCGCGGCTATGACGGCAATCCGATGCAGGTGCACATGCGTGCC
GGAGACGTGAAGGCCCAGCATTTCGCGCCCTGGCTCATGCTTTTCGACGAAACCCTGCGCCGGACGCTGCCGGCCGAGAC
GGCCCGGGCCTGGTCGGCGCTGGCGCATCGCATCGGCGCGGGGCTGCGCATGGGGGTCGAGGACCTGCGCGAGCGCCGCC
CCGGCCCGCCGGTCTTGCGCTGA

Upstream 100 bases:

>100_bases
TTGCCGCTGCTGCGGGGCGGGCTGACGCATCTTGTCGCGGGCACCATGATCCCGCCGCTTTCGGGGGTGCGCGATCCGTG
ACGGGCTTGCAGGACCGGCC

Downstream 100 bases:

>100_bases
GCCGGTCAGCGATGTAGACAAAACGGGAACATCCGAAAGGGCTTCCCGATGAAGATCGACTATCTCGAATTTTCCTCGCC
CGATCTGCCGGCCACGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Cj-trHbP; Truncated Hb [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MRVHIRRMIPPRFDVTPEQIDRVVATFYAAIRRHEVLGPVFAGHVADWPEHEAKIARFWRNAILYERGYDGNPMQVHMRA
GDVKAQHFAPWLMLFDETLRRTLPAETARAWSALAHRIGAGLRMGVEDLRERRPGPPVLR

Sequences:

>Translated_140_residues
MRVHIRRMIPPRFDVTPEQIDRVVATFYAAIRRHEVLGPVFAGHVADWPEHEAKIARFWRNAILYERGYDGNPMQVHMRA
GDVKAQHFAPWLMLFDETLRRTLPAETARAWSALAHRIGAGLRMGVEDLRERRPGPPVLR
>Mature_140_residues
MRVHIRRMIPPRFDVTPEQIDRVVATFYAAIRRHEVLGPVFAGHVADWPEHEAKIARFWRNAILYERGYDGNPMQVHMRA
GDVKAQHFAPWLMLFDETLRRTLPAETARAWSALAHRIGAGLRMGVEDLRERRPGPPVLR

Specific function: Has been suggested to be involved in cytochrome c peroxidase or P450-like oxygen chemistry or cyanide detoxification. The high oxygen affinity of this protein suggests that it probably does not function as an oxygen transporter [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group III subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 16240; Mature: 16240

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVHIRRMIPPRFDVTPEQIDRVVATFYAAIRRHEVLGPVFAGHVADWPEHEAKIARFWR
CCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
NAILYERGYDGNPMQVHMRAGDVKAQHFAPWLMLFDETLRRTLPAETARAWSALAHRIGA
HHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
GLRMGVEDLRERRPGPPVLR
CHHCCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRVHIRRMIPPRFDVTPEQIDRVVATFYAAIRRHEVLGPVFAGHVADWPEHEAKIARFWR
CCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
NAILYERGYDGNPMQVHMRAGDVKAQHFAPWLMLFDETLRRTLPAETARAWSALAHRIGA
HHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
GLRMGVEDLRERRPGPPVLR
CHHCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]