| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is yetM [H]
Identifier: 119386321
GI number: 119386321
Start: 768541
End: 769713
Strand: Direct
Name: yetM [H]
Synonym: Pden_3613
Alternate gene names: 119386321
Gene position: 768541-769713 (Clockwise)
Preceding gene: 119386319
Following gene: 119386322
Centisome position: 44.42
GC content: 73.4
Gene sequence:
>1173_bases ATGAGCTACAGGATCGCCATCGCGGGCGCCGGGATCGGCGGCCTCGCCGCTGCCGCGCTGCTGGCCCGCGAGGGCCACGA CGTCACTCTGTTCGAGCGTTTCGCCGCGCCGCGTCCCCTGGGCTCGGGGCTGGTGGTCCAGCCGGTCGGGCTGGCCGTGC TGGACCGGATCGGCGCGGGCGGGGACACGCGCCGCCTCTCCAGCCCCATCGCCCGCATGCTCGGGCACGAGGCGCGGGGC AGCAAGGTGCTGGACGTCTCCTATCCCGTCGCCGCGCCGGGCCGCGGCATCCACCGCGCCACGTTGTTCCAACTGCTCTG GGACCGGGTTGTTGCGCTCGGCCTGCCGGTGGTGACCTCGGCCGAGATCGTCTCGGCCGGCCCGGACGGGGCCGGGCGGC GCCTCATGCTGGCCGACGGGCGCGATTTCGGCCCTTTCGACCTGGTCGTCGATGCCAGCGGCGCGGGTTCGCGACTGTCG CCCCTGCAGGCGCGGCCGCTGGGCTATGGCGCGATCTGGGGCACGGTGCCCTGGCCCGAAACGGATTTCCCGCGCAGCGA ACTGTGGCAGCGTTACCGCGCCGCCAGCCGGATGGCGGGCGTGCTGCCCATCGGCTGCCTGCCCGGCGATCCGACGCCCC GCGCCGCCGTCTTCTGGTCCATGCCGCTGGCCGAACTGGACCGCTGGCCGCAGGCGCCGATGGCCCACTGGCGCGACGGG GTTGCCGCGCTCTGGCCGCAGATGGCGCCGTTCCTGGAAACCATCCGCGAGAATGCGCAGATGACCCAGGCGCGCTACAG CCACGGCACCCTGCGCCGCCCCTGGGCGCCGGGCCTGGTCCATATCGGCGACGCCGCGCATCGCGCCAGCCCGCAACTGG GGCAGGGGGCGAACATGGCGCTGCTCGATGCCTTCGCGCTGGCCCATGCGCTGCGCCGTCCGCTCGAAGAGGCCCTGCCG GATTACGCCGCCATGCGCCGCTGGCATGTCCGTATCTACCAGGGGATGAGCGCCGCCTTCACCCCGATGTATCAGTCGGG CAGCCGTAGCCTGCCCTGGCTGCGCGACCTGGTGCTCGCGCCGCTCTCTACCTTGCCGCTGCTGCGGGGCGGGCTGACGC ATCTTGTCGCGGGCACCATGATCCCGCCGCTTTCGGGGGTGCGCGATCCGTGA
Upstream 100 bases:
>100_bases AAGATCCCGGCCCTGCTGAACATGCGCGGGTTATAGGAAACCGCCCGGACCCCTGCAAGCGCGGCTTGCACCTGCGGCCG GCCTGGGGCAGCAAGCGGCC
Downstream 100 bases:
>100_bases CGGGCTTGCAGGACCGGCCGTGCGGGTCCATATCCGCCGCATGATCCCGCCGCGCTTTGACGTCACCCCCGAACAGATCG ACCGCGTCGTCGCCACCTTC
Product: monooxygenase, FAD-binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MSYRIAIAGAGIGGLAAAALLAREGHDVTLFERFAAPRPLGSGLVVQPVGLAVLDRIGAGGDTRRLSSPIARMLGHEARG SKVLDVSYPVAAPGRGIHRATLFQLLWDRVVALGLPVVTSAEIVSAGPDGAGRRLMLADGRDFGPFDLVVDASGAGSRLS PLQARPLGYGAIWGTVPWPETDFPRSELWQRYRAASRMAGVLPIGCLPGDPTPRAAVFWSMPLAELDRWPQAPMAHWRDG VAALWPQMAPFLETIRENAQMTQARYSHGTLRRPWAPGLVHIGDAAHRASPQLGQGANMALLDAFALAHALRRPLEEALP DYAAMRRWHVRIYQGMSAAFTPMYQSGSRSLPWLRDLVLAPLSTLPLLRGGLTHLVAGTMIPPLSGVRDP
Sequences:
>Translated_390_residues MSYRIAIAGAGIGGLAAAALLAREGHDVTLFERFAAPRPLGSGLVVQPVGLAVLDRIGAGGDTRRLSSPIARMLGHEARG SKVLDVSYPVAAPGRGIHRATLFQLLWDRVVALGLPVVTSAEIVSAGPDGAGRRLMLADGRDFGPFDLVVDASGAGSRLS PLQARPLGYGAIWGTVPWPETDFPRSELWQRYRAASRMAGVLPIGCLPGDPTPRAAVFWSMPLAELDRWPQAPMAHWRDG VAALWPQMAPFLETIRENAQMTQARYSHGTLRRPWAPGLVHIGDAAHRASPQLGQGANMALLDAFALAHALRRPLEEALP DYAAMRRWHVRIYQGMSAAFTPMYQSGSRSLPWLRDLVLAPLSTLPLLRGGLTHLVAGTMIPPLSGVRDP >Mature_389_residues SYRIAIAGAGIGGLAAAALLAREGHDVTLFERFAAPRPLGSGLVVQPVGLAVLDRIGAGGDTRRLSSPIARMLGHEARGS KVLDVSYPVAAPGRGIHRATLFQLLWDRVVALGLPVVTSAEIVSAGPDGAGRRLMLADGRDFGPFDLVVDASGAGSRLSP LQARPLGYGAIWGTVPWPETDFPRSELWQRYRAASRMAGVLPIGCLPGDPTPRAAVFWSMPLAELDRWPQAPMAHWRDGV AALWPQMAPFLETIRENAQMTQARYSHGTLRRPWAPGLVHIGDAAHRASPQLGQGANMALLDAFALAHALRRPLEEALPD YAAMRRWHVRIYQGMSAAFTPMYQSGSRSLPWLRDLVLAPLSTLPLLRGGLTHLVAGTMIPPLSGVRDP
Specific function: Unknown
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: NA
Molecular weight: Translated: 41905; Mature: 41774
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRIAIAGAGIGGLAAAALLAREGHDVTLFERFAAPRPLGSGLVVQPVGLAVLDRIGAG CCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEECHHHHHHHHHHCCC GDTRRLSSPIARMLGHEARGSKVLDVSYPVAAPGRGIHRATLFQLLWDRVVALGLPVVTS CCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC AEIVSAGPDGAGRRLMLADGRDFGPFDLVVDASGAGSRLSPLQARPLGYGAIWGTVPWPE HHHHCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCC TDFPRSELWQRYRAASRMAGVLPIGCLPGDPTPRAAVFWSMPLAELDRWPQAPMAHWRDG CCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCHHHHHCCCCCCHHHHHCC VAALWPQMAPFLETIRENAQMTQARYSHGTLRRPWAPGLVHIGDAAHRASPQLGQGANMA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCHH LLDAFALAHALRRPLEEALPDYAAMRRWHVRIYQGMSAAFTPMYQSGSRSLPWLRDLVLA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCHHHHHHHHH PLSTLPLLRGGLTHLVAGTMIPPLSGVRDP HHHHHHHHHCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SYRIAIAGAGIGGLAAAALLAREGHDVTLFERFAAPRPLGSGLVVQPVGLAVLDRIGAG CEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEECHHHHHHHHHHCCC GDTRRLSSPIARMLGHEARGSKVLDVSYPVAAPGRGIHRATLFQLLWDRVVALGLPVVTS CCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC AEIVSAGPDGAGRRLMLADGRDFGPFDLVVDASGAGSRLSPLQARPLGYGAIWGTVPWPE HHHHCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCC TDFPRSELWQRYRAASRMAGVLPIGCLPGDPTPRAAVFWSMPLAELDRWPQAPMAHWRDG CCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCHHHHHCCCCCCHHHHHCC VAALWPQMAPFLETIRENAQMTQARYSHGTLRRPWAPGLVHIGDAAHRASPQLGQGANMA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCHH LLDAFALAHALRRPLEEALPDYAAMRRWHVRIYQGMSAAFTPMYQSGSRSLPWLRDLVLA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCHHHHHHHHH PLSTLPLLRGGLTHLVAGTMIPPLSGVRDP HHHHHHHHHCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9141694; 9384377 [H]