| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386319
Identifier: 119386319
GI number: 119386319
Start: 764201
End: 765376
Strand: Direct
Name: 119386319
Synonym: Pden_3611
Alternate gene names: NA
Gene position: 764201-765376 (Clockwise)
Preceding gene: 119386314
Following gene: 119386321
Centisome position: 44.17
GC content: 69.22
Gene sequence:
>1176_bases ATGACGGACGAGGGCAAGGATCAGGACCAGAGGGATATGTCCCCCGTGTCCCGGGCGGCCGAAAGAGCCGCGCGCCAGGC GGCCAACCGAGCCGAGCGCGAGGCGCGACGCCAGGCCCGCCAGGCCGAACGCAAGGGGCGCAGGGCCGATGCGGCCGCCG GGGTTCTGGCAGCCGACCCCGCCCCAGCACAGGCAACTTCCTTCAATATCCTGTTGGTCGGGCAGGGCATGCGCCTGGGC ATGGAGGCGGTGCTGTTCGCCGCCAGCCTGCGCCGCCATGCCCCGGACTGGCAGGGACGGCTGATCGTCGCGGAGCCTCG GCCCGAGGGCGCCTGGGCCGGCACGCAGACCCTGATGCCCGATGCCATCCGCCACGCGCTTGCCGGCTTCGACGCCGAGA TCCTGCCCTTTGCCGCCCGGCATTTCGGCGCCAGCTATCCCTACGGCAACAAGATCGAGGCCCTGGCGGTCCTGCCGCCG CATGAACCGTTCATCTTCTTCGACAGCGATACGCTGGTGACGGGACCGCTGGACCGGCTGCCCTTCGACTTTTCGCGCCC CTCGGCCTCGATGCGCCGGACCGGAACCTGGCCCGAGCCGCCGCTCTACGGTCCAGGCTACGGTGCGATCTGGAAATCGC TCTATGACCGTTTCGGGCTGGATTACGAAGGCTCGCTGGACCGCAGCCACCCGGACGAGCATTGGGAGCGCTACCTCTAT TTCAATGCCGGCTGGTTCTTCGGCGCCGATGCGCAGGAGTTCGGCCGGCGTTTCCTGGACTGGACGCTGGCGATCCGCAC CGATCCGGGCGAGGCGCTGGCCTGCCAGAAGCTCGATGTGTTGCTGGACCAGGTGGCGCTTCCGCTGGTGATCCACGCGC TTGGCGGCGGGCGCCCGGGGCCAGGTCTGGCCGGTCTCGACGGCGACGTGACCTGTCATTACCGCGATCTGCCCCTGCTC TATGCCCGGGAAAGCGACCATGCCGTCGAGACGGTCGAGGCACTTTTGCGCGATCCGCGCCTGGGACCGCTGGCCGAAGC ATGGGAGCCGGCAAGGAAGATCGTGCTGGAGGGCGTGGGGCGCAACAGCATCCGCCCCATGTTCGACCGCCGCGCCCCGC TGATCGAAGGGCGGACGCGGCAGATCCTGAAGAAGGCCGGCCTCTGGCTGCGCTGA
Upstream 100 bases:
>100_bases GCATTCAGGTTGAATACGGGAATCTGAATTCATCTCTGGAATGAGATGCCGTCTTGTTGCTAAGACCTGTCGCGGTAAAG ATTCGCATGATAGGTGTGCC
Downstream 100 bases:
>100_bases CGGCGGCTGCGGGCCGGGGATGCGCCATCCCGGCCCGGCTGTGTTTTCCTTAGCCCGCGCTCAGCACCGCGTCGCAGCGG GCGCAGGTGCCCGGATGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MTDEGKDQDQRDMSPVSRAAERAARQAANRAEREARRQARQAERKGRRADAAAGVLAADPAPAQATSFNILLVGQGMRLG MEAVLFAASLRRHAPDWQGRLIVAEPRPEGAWAGTQTLMPDAIRHALAGFDAEILPFAARHFGASYPYGNKIEALAVLPP HEPFIFFDSDTLVTGPLDRLPFDFSRPSASMRRTGTWPEPPLYGPGYGAIWKSLYDRFGLDYEGSLDRSHPDEHWERYLY FNAGWFFGADAQEFGRRFLDWTLAIRTDPGEALACQKLDVLLDQVALPLVIHALGGGRPGPGLAGLDGDVTCHYRDLPLL YARESDHAVETVEALLRDPRLGPLAEAWEPARKIVLEGVGRNSIRPMFDRRAPLIEGRTRQILKKAGLWLR
Sequences:
>Translated_391_residues MTDEGKDQDQRDMSPVSRAAERAARQAANRAEREARRQARQAERKGRRADAAAGVLAADPAPAQATSFNILLVGQGMRLG MEAVLFAASLRRHAPDWQGRLIVAEPRPEGAWAGTQTLMPDAIRHALAGFDAEILPFAARHFGASYPYGNKIEALAVLPP HEPFIFFDSDTLVTGPLDRLPFDFSRPSASMRRTGTWPEPPLYGPGYGAIWKSLYDRFGLDYEGSLDRSHPDEHWERYLY FNAGWFFGADAQEFGRRFLDWTLAIRTDPGEALACQKLDVLLDQVALPLVIHALGGGRPGPGLAGLDGDVTCHYRDLPLL YARESDHAVETVEALLRDPRLGPLAEAWEPARKIVLEGVGRNSIRPMFDRRAPLIEGRTRQILKKAGLWLR >Mature_390_residues TDEGKDQDQRDMSPVSRAAERAARQAANRAEREARRQARQAERKGRRADAAAGVLAADPAPAQATSFNILLVGQGMRLGM EAVLFAASLRRHAPDWQGRLIVAEPRPEGAWAGTQTLMPDAIRHALAGFDAEILPFAARHFGASYPYGNKIEALAVLPPH EPFIFFDSDTLVTGPLDRLPFDFSRPSASMRRTGTWPEPPLYGPGYGAIWKSLYDRFGLDYEGSLDRSHPDEHWERYLYF NAGWFFGADAQEFGRRFLDWTLAIRTDPGEALACQKLDVLLDQVALPLVIHALGGGRPGPGLAGLDGDVTCHYRDLPLLY ARESDHAVETVEALLRDPRLGPLAEAWEPARKIVLEGVGRNSIRPMFDRRAPLIEGRTRQILKKAGLWLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43436; Mature: 43305
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDEGKDQDQRDMSPVSRAAERAARQAANRAEREARRQARQAERKGRRADAAAGVLAADP CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEECCC APAQATSFNILLVGQGMRLGMEAVLFAASLRRHAPDWQGRLIVAEPRPEGAWAGTQTLMP CCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHH DAIRHALAGFDAEILPFAARHFGASYPYGNKIEALAVLPPHEPFIFFDSDTLVTGPLDRL HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEECCCCEEECCHHHC PFDFSRPSASMRRTGTWPEPPLYGPGYGAIWKSLYDRFGLDYEGSLDRSHPDEHWERYLY CCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCEEEE FNAGWFFGADAQEFGRRFLDWTLAIRTDPGEALACQKLDVLLDQVALPLVIHALGGGRPG EECCEEECCCHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PGLAGLDGDVTCHYRDLPLLYARESDHAVETVEALLRDPRLGPLAEAWEPARKIVLEGVG CCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC RNSIRPMFDRRAPLIEGRTRQILKKAGLWLR CCCCCHHHHCCCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure TDEGKDQDQRDMSPVSRAAERAARQAANRAEREARRQARQAERKGRRADAAAGVLAADP CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEECCC APAQATSFNILLVGQGMRLGMEAVLFAASLRRHAPDWQGRLIVAEPRPEGAWAGTQTLMP CCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHH DAIRHALAGFDAEILPFAARHFGASYPYGNKIEALAVLPPHEPFIFFDSDTLVTGPLDRL HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEECCCCEEECCHHHC PFDFSRPSASMRRTGTWPEPPLYGPGYGAIWKSLYDRFGLDYEGSLDRSHPDEHWERYLY CCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCEEEE FNAGWFFGADAQEFGRRFLDWTLAIRTDPGEALACQKLDVLLDQVALPLVIHALGGGRPG EECCEEECCCHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PGLAGLDGDVTCHYRDLPLLYARESDHAVETVEALLRDPRLGPLAEAWEPARKIVLEGVG CCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC RNSIRPMFDRRAPLIEGRTRQILKKAGLWLR CCCCCHHHHCCCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA