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The map label for this gene is viuB [H]

Identifier: 119386241

GI number: 119386241

Start: 680760

End: 681563

Strand: Direct

Name: viuB [H]

Synonym: Pden_3530

Alternate gene names: 119386241

Gene position: 680760-681563 (Clockwise)

Preceding gene: 119386239

Following gene: 119386242

Centisome position: 39.35

GC content: 68.41

Gene sequence:

>804_bases
ATGCGGGACATGGACAGGGTCCAGATGGAGGTCGTCGGGATACGGCACCCCTTCGCCTCGGTCGCGCGGCTGGTCGGGCG
CATCGCGCCCTCCGACCCCGGGGCATGGCAGCCGGCCAACCTGGCGGTGCGCATCGAGGTCGAGACACCCGAGGGCCAGC
GCCCGGTCTCGCGGATCTATACCATCCGCAGCTTCGATCCCGCCGCCTGCACGGTCGAGATCGACTTCGTGATCCATGAC
GACGACAGTCCGGCGATGCGCTGGCTGGCGGCTGCCAGGCCCGGCACCACGGTGTGGATGATCGGCCCGCGTCAGCATCT
GGTCCCCGCGCAAGACCCGCTGAAACGCGTAGCGGTCTTTGCCGACGAAACTGCCATTCCCGCCGTCCATGCCATTTTGA
ACGCTTGGCCGGAAGGCGTTCGCGGCAGCCTGTGGATCGAGACGGGCGAAGCCGGCGCCTTTCAGGAACTGCCGCGGCTG
CCGGGCATCGACTATCACCTGATCCGCCGCAGCCCCGACCAGCCGGCCGGGACCACCGGGGCACTGCTGGCCGCCGCGCG
CGCCGCCATCGGCTCGGCGTGCGGCTGGACGCTGTGGGCTGCCGGCGAGCGGCAGGAGATGCGCGAATTTCGCAGCCATT
TCCGTGCACTGGGGCTGGCGCGCGACGATCTGCGCGTCTTCGGCTATTGGAAGCATGGCGCCAGCAGTTCCGAGATCGAC
CGAATCCGCCTGCGCGAATATGCCGAGATACGCAAGCGCGGGCTGAGGCTGGAAGACCTCGACGATGCCGAATTGCCGAT
CTGA

Upstream 100 bases:

>100_bases
CGGTCCCGCGAATCCAGCCGCGGGCGGAAAGGATGCCATGGCCAGCCCGAACAAGGAATCCGTCGAAGACCCCGAGGGCC
TGCTGTCGCAGCAGGACCAC

Downstream 100 bases:

>100_bases
GGGATGCCGATGCTTCGTCGTCTGACGCCGCTGCTGCTTGTGCTGATCCTGCCCGCCGTGGCGCTGGCCGAAGGCTGGCC
GCGCAGCATTCCCGATGCGA

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MRDMDRVQMEVVGIRHPFASVARLVGRIAPSDPGAWQPANLAVRIEVETPEGQRPVSRIYTIRSFDPAACTVEIDFVIHD
DDSPAMRWLAAARPGTTVWMIGPRQHLVPAQDPLKRVAVFADETAIPAVHAILNAWPEGVRGSLWIETGEAGAFQELPRL
PGIDYHLIRRSPDQPAGTTGALLAAARAAIGSACGWTLWAAGERQEMREFRSHFRALGLARDDLRVFGYWKHGASSSEID
RIRLREYAEIRKRGLRLEDLDDAELPI

Sequences:

>Translated_267_residues
MRDMDRVQMEVVGIRHPFASVARLVGRIAPSDPGAWQPANLAVRIEVETPEGQRPVSRIYTIRSFDPAACTVEIDFVIHD
DDSPAMRWLAAARPGTTVWMIGPRQHLVPAQDPLKRVAVFADETAIPAVHAILNAWPEGVRGSLWIETGEAGAFQELPRL
PGIDYHLIRRSPDQPAGTTGALLAAARAAIGSACGWTLWAAGERQEMREFRSHFRALGLARDDLRVFGYWKHGASSSEID
RIRLREYAEIRKRGLRLEDLDDAELPI
>Mature_267_residues
MRDMDRVQMEVVGIRHPFASVARLVGRIAPSDPGAWQPANLAVRIEVETPEGQRPVSRIYTIRSFDPAACTVEIDFVIHD
DDSPAMRWLAAARPGTTVWMIGPRQHLVPAQDPLKRVAVFADETAIPAVHAILNAWPEGVRGSLWIETGEAGAFQELPRL
PGIDYHLIRRSPDQPAGTTGALLAAARAAIGSACGWTLWAAGERQEMREFRSHFRALGLARDDLRVFGYWKHGASSSEID
RIRLREYAEIRKRGLRLEDLDDAELPI

Specific function: Involved in intracellular removal of iron from iron- vulnibactin complex. Vulnibactin is a iron-chelating compound involved in transporting iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 29710; Mature: 29710

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDMDRVQMEVVGIRHPFASVARLVGRIAPSDPGAWQPANLAVRIEVETPEGQRPVSRIY
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHEE
TIRSFDPAACTVEIDFVIHDDDSPAMRWLAAARPGTTVWMIGPRQHLVPAQDPLKRVAVF
EEECCCCCEEEEEEEEEEECCCCHHHHHHHHCCCCCEEEEECCHHCCCCCHHHHHHHHHH
ADETAIPAVHAILNAWPEGVRGSLWIETGEAGAFQELPRLPGIDYHLIRRSPDQPAGTTG
CCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCCCHH
ALLAAARAAIGSACGWTLWAAGERQEMREFRSHFRALGLARDDLRVFGYWKHGASSSEID
HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHH
RIRLREYAEIRKRGLRLEDLDDAELPI
HHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRDMDRVQMEVVGIRHPFASVARLVGRIAPSDPGAWQPANLAVRIEVETPEGQRPVSRIY
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHEE
TIRSFDPAACTVEIDFVIHDDDSPAMRWLAAARPGTTVWMIGPRQHLVPAQDPLKRVAVF
EEECCCCCEEEEEEEEEEECCCCHHHHHHHHCCCCCEEEEECCHHCCCCCHHHHHHHHHH
ADETAIPAVHAILNAWPEGVRGSLWIETGEAGAFQELPRLPGIDYHLIRRSPDQPAGTTG
CCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCCCHH
ALLAAARAAIGSACGWTLWAAGERQEMREFRSHFRALGLARDDLRVFGYWKHGASSSEID
HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHH
RIRLREYAEIRKRGLRLEDLDDAELPI
HHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8698519 [H]