Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
---|---|
Accession | NC_008687 |
Length | 1,730,097 |
Click here to switch to the map view.
The map label for this gene is fepB [H]
Identifier: 119386242
GI number: 119386242
Start: 681573
End: 682511
Strand: Direct
Name: fepB [H]
Synonym: Pden_3531
Alternate gene names: 119386242
Gene position: 681573-682511 (Clockwise)
Preceding gene: 119386241
Following gene: 119386243
Centisome position: 39.4
GC content: 67.52
Gene sequence:
>939_bases ATGCTTCGTCGTCTGACGCCGCTGCTGCTTGTGCTGATCCTGCCCGCCGTGGCGCTGGCCGAAGGCTGGCCGCGCAGCAT TCCCGATGCGACGGGCGAGGTCACGGTGGCCGCCCCGCCGCTGCGGATCGTCTCGGCCTCGCCCAGCCTGACCGGTATCC TGCTGGCCATCGACGCGCCGGTCGCGGCGACGGCCGCGGCGCTGGTCGGGCCGCTGACCGACGACAAGGGCTTTTTCACG CAATGGGCCGAGGTGGCCGACCGGCGTGGGGTCGAGGTCCTGTATCCCAACCTGAATTTCGACATCGAATCGCTGATCGT GCAGGAACCGGATCTGGTCGTCGCCTCATCGGTCGGCGGCGACAGCATCATGCCCTACCTGGAGCAGGTGCGCGCGCAAG GCGTGCCTGTGATCGTGCTGGATTACTCGGCCCAGAGCTGGGAGAACCTGGCCCAGGTGCTGGGCCGCGCGACCGGGCAC GAAGTCGACGCCGCCCGCGTCACCCAGGATTTCGCCCGGCAGGCCGCCGAGGTGAAATCGACCCTGGCGCTGCCCGAGGG GGATGTCAGCGTCGTGTCCTACAACTTCGCCGGCACCTATGCCGTCGGCAAGCCCAGCAGCCCGCAGGCCAAGGTCCTGG CGGCGCTTGGCTTTTCGGTCAGGGGCATTCCTGAGGGAATGCAGGGCGACGTCTCGCGCTCGGCCGATTTCGACTTCATC TCGCATGAGAACCTGCCCGCCGCGATCAGCGGCGACAGTGTCTTCCTGCTCAACGGCACGGATGCGATGGTGCGCAGCTT CAGCGCCGATCCTGTGCTGGCGAACCTGCCCGCCGTGCGCGCGGGCCGGGTCTATCCGCTGGGTCCGACCTCGTTCCGGG TGGATTACTATTCCGGCCTGCAGATCGTCGAGACCGTCCGGCAAATCTTTGCGAAATGA
Upstream 100 bases:
>100_bases GATCGACCGAATCCGCCTGCGCGAATATGCCGAGATACGCAAGCGCGGGCTGAGGCTGGAAGACCTCGACGATGCCGAAT TGCCGATCTGAGGGATGCCG
Downstream 100 bases:
>100_bases CCCCGCAAGGCCCGATCCCGCATCCTCCGCTGCTGCGGCAGGCCCCGGCGGGCCGGCATTATGCGCTGGGGATCGCGGTG CTGGCTGTGCTGGCGCTGGC
Product: iron-enterobactin transporter periplasmic binding protein
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MLRRLTPLLLVLILPAVALAEGWPRSIPDATGEVTVAAPPLRIVSASPSLTGILLAIDAPVAATAAALVGPLTDDKGFFT QWAEVADRRGVEVLYPNLNFDIESLIVQEPDLVVASSVGGDSIMPYLEQVRAQGVPVIVLDYSAQSWENLAQVLGRATGH EVDAARVTQDFARQAAEVKSTLALPEGDVSVVSYNFAGTYAVGKPSSPQAKVLAALGFSVRGIPEGMQGDVSRSADFDFI SHENLPAAISGDSVFLLNGTDAMVRSFSADPVLANLPAVRAGRVYPLGPTSFRVDYYSGLQIVETVRQIFAK
Sequences:
>Translated_312_residues MLRRLTPLLLVLILPAVALAEGWPRSIPDATGEVTVAAPPLRIVSASPSLTGILLAIDAPVAATAAALVGPLTDDKGFFT QWAEVADRRGVEVLYPNLNFDIESLIVQEPDLVVASSVGGDSIMPYLEQVRAQGVPVIVLDYSAQSWENLAQVLGRATGH EVDAARVTQDFARQAAEVKSTLALPEGDVSVVSYNFAGTYAVGKPSSPQAKVLAALGFSVRGIPEGMQGDVSRSADFDFI SHENLPAAISGDSVFLLNGTDAMVRSFSADPVLANLPAVRAGRVYPLGPTSFRVDYYSGLQIVETVRQIFAK >Mature_312_residues MLRRLTPLLLVLILPAVALAEGWPRSIPDATGEVTVAAPPLRIVSASPSLTGILLAIDAPVAATAAALVGPLTDDKGFFT QWAEVADRRGVEVLYPNLNFDIESLIVQEPDLVVASSVGGDSIMPYLEQVRAQGVPVIVLDYSAQSWENLAQVLGRATGH EVDAARVTQDFARQAAEVKSTLALPEGDVSVVSYNFAGTYAVGKPSSPQAKVLAALGFSVRGIPEGMQGDVSRSADFDFI SHENLPAAISGDSVFLLNGTDAMVRSFSADPVLANLPAVRAGRVYPLGPTSFRVDYYSGLQIVETVRQIFAK
Specific function: Binds ferrienterobactin; part of the binding-protein- dependent transport system for uptake of ferrienterobactin [H]
COG id: COG4592
COG function: function code P; ABC-type Fe2+-enterobactin transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786807, Length=295, Percent_Identity=38.3050847457627, Blast_Score=199, Evalue=1e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 33016; Mature: 33016
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRLTPLLLVLILPAVALAEGWPRSIPDATGEVTVAAPPLRIVSASPSLTGILLAIDAP CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEECCCCCEEEEEEECCC VAATAAALVGPLTDDKGFFTQWAEVADRRGVEVLYPNLNFDIESLIVQEPDLVVASSVGG HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHEECCCCEEEEECCCC DSIMPYLEQVRAQGVPVIVLDYSAQSWENLAQVLGRATGHEVDAARVTQDFARQAAEVKS CHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH TLALPEGDVSVVSYNFAGTYAVGKPSSPQAKVLAALGFSVRGIPEGMQGDVSRSADFDFI HHCCCCCCEEEEEEECCEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE SHENLPAAISGDSVFLLNGTDAMVRSFSADPVLANLPAVRAGRVYPLGPTSFRVDYYSGL CCCCCCCEECCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEHHCCH QIVETVRQIFAK HHHHHHHHHHCC >Mature Secondary Structure MLRRLTPLLLVLILPAVALAEGWPRSIPDATGEVTVAAPPLRIVSASPSLTGILLAIDAP CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEECCCCCEEEEEEECCC VAATAAALVGPLTDDKGFFTQWAEVADRRGVEVLYPNLNFDIESLIVQEPDLVVASSVGG HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHEECCCCEEEEECCCC DSIMPYLEQVRAQGVPVIVLDYSAQSWENLAQVLGRATGHEVDAARVTQDFARQAAEVKS CHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH TLALPEGDVSVVSYNFAGTYAVGKPSSPQAKVLAALGFSVRGIPEGMQGDVSRSADFDFI HHCCCCCCEEEEEEECCEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE SHENLPAAISGDSVFLLNGTDAMVRSFSADPVLANLPAVRAGRVYPLGPTSFRVDYYSGL CCCCCCCEECCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEHHCCH QIVETVRQIFAK HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]