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The map label for this gene is yiaM [C]

Identifier: 119386192

GI number: 119386192

Start: 627805

End: 628311

Strand: Direct

Name: yiaM [C]

Synonym: Pden_3481

Alternate gene names: 119386192

Gene position: 627805-628311 (Clockwise)

Preceding gene: 119386191

Following gene: 119386193

Centisome position: 36.29

GC content: 63.71

Gene sequence:

>507_bases
ATGTCCAAGCTCTGGCGCGCCTATGTCGCCGCCGTGGAAGCATTCTGCTTTGCGGGGATCGGTGCGATCCTTGTGATCGG
CACCATGCAGGTCATCTGGCGCTATGTCTTCAACAGCTCGCTGTTCTGGTCGGAAGAGGCGATGCGCTATCTGATGATCT
GGATCGTGATGATCGGTGCCGGTCTCAGCTATTCCCGCGGCCAGTTCCTGGGGATGCGGCTGGCGGTGGACCGCCTGCCC
GAAGGCCCGCGCCGGGCCGCCAACCTGGTCTCGGCCGCGATCATCCTGGTCTTTCTGGCGGCGATCCTGTGGTTCGGCAC
CAGGTTCGCCTGGATGACGCGGTTCCAGACGGCGACTGCGCTGGGTTTTTCGCTGTTCTGGGTCCACATCGCGATCACCG
TCGGCGCGGCGCTTCTGGCGCTGCATGTCGCGCTGAACGAATTCTTCGGCATTGCGCGGGAAGAGAAGCCCGAAGAGCAC
CCGATGGGCGCGGAGGAAGCGCTGTGA

Upstream 100 bases:

>100_bases
TTCGCGGCTGCGGCGAAAAAGCTGGCTCCGGCCGCTCAATAACGCACAGGCGCGCGGGCCGGTCCCGCGCCTTCCGCCTG
CGTTCTCAACGGAGAAACCC

Downstream 100 bases:

>100_bases
TCTGGCTTGGCTCGATTTTCGTCCTGACGCTGGCCCTGGGCATGCCGATCGCCTTCGTGCTGGGCATCAGCGCGCTGGGT
TACTTCTATTTCACCGGCCA

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSKLWRAYVAAVEAFCFAGIGAILVIGTMQVIWRYVFNSSLFWSEEAMRYLMIWIVMIGAGLSYSRGQFLGMRLAVDRLP
EGPRRAANLVSAAIILVFLAAILWFGTRFAWMTRFQTATALGFSLFWVHIAITVGAALLALHVALNEFFGIAREEKPEEH
PMGAEEAL

Sequences:

>Translated_168_residues
MSKLWRAYVAAVEAFCFAGIGAILVIGTMQVIWRYVFNSSLFWSEEAMRYLMIWIVMIGAGLSYSRGQFLGMRLAVDRLP
EGPRRAANLVSAAIILVFLAAILWFGTRFAWMTRFQTATALGFSLFWVHIAITVGAALLALHVALNEFFGIAREEKPEEH
PMGAEEAL
>Mature_167_residues
SKLWRAYVAAVEAFCFAGIGAILVIGTMQVIWRYVFNSSLFWSEEAMRYLMIWIVMIGAGLSYSRGQFLGMRLAVDRLPE
GPRRAANLVSAAIILVFLAAILWFGTRFAWMTRFQTATALGFSLFWVHIAITVGAALLALHVALNEFFGIAREEKPEEHP
MGAEEAL

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18780; Mature: 18649

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLWRAYVAAVEAFCFAGIGAILVIGTMQVIWRYVFNSSLFWSEEAMRYLMIWIVMIGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
GLSYSRGQFLGMRLAVDRLPEGPRRAANLVSAAIILVFLAAILWFGTRFAWMTRFQTATA
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFSLFWVHIAITVGAALLALHVALNEFFGIAREEKPEEHPMGAEEAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
SKLWRAYVAAVEAFCFAGIGAILVIGTMQVIWRYVFNSSLFWSEEAMRYLMIWIVMIGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
GLSYSRGQFLGMRLAVDRLPEGPRRAANLVSAAIILVFLAAILWFGTRFAWMTRFQTATA
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFSLFWVHIAITVGAALLALHVALNEFFGIAREEKPEEHPMGAEEAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA