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The map label for this gene is yiaO [C]

Identifier: 119386139

GI number: 119386139

Start: 569820

End: 570806

Strand: Direct

Name: yiaO [C]

Synonym: Pden_3427

Alternate gene names: 119386139

Gene position: 569820-570806 (Clockwise)

Preceding gene: 119386135

Following gene: 119386140

Centisome position: 32.94

GC content: 66.16

Gene sequence:

>987_bases
ATGAAACAGGGAAGAATCTTCGCTTTCGCGGCCGCTTGCGCCGTCGGGCTGGGCGTGTCGGCGGCTGTGGCCGAGACCGC
CTGGGACATGTCCGTGGTCTGGCCCGAGGGCAATTTCCACACCCAGAACGCCATCGCCTTTGCCGAAGCGGTCAAGGACG
TGACGGATGGCGAGGTGGTCATCACCGTCCATTCCGGCGGTGCGCTGGGCATCAAGGGCCCCGAGGGCATGGCGGCGGTT
CGCGACGGGCTGGTGCCGATCGCCGACATCCTGCTGAACCAGCAGGTGGGCGAGGCGCCGATCCTGGGCATCGAGACGCT
GCCCTATCTGGCGCCGACCATGCCGGACCTGGCGCTTCTGCACAAATTCTATCGGCCCAAGCTCGAGGAGGTGGCCGAGG
GCATGAACCAGAAGCTGCTCTACCTGGTGCCGTGGCCGGGGCAGGCGGTGTTCGCACCCAATCCGATCAATGGTCTGGAC
GACATGAAGGGCCTGACGGTCCGCGTCGTGGATGCCAACGGTTCGTCCTATTTCGAGGCGCTCGGCGCCACGCCGGTGCA
GATGCCCTGGGGCGAGGTGGTGCCCTCGCTGGCGGCAGGCACGATCAAGGGCGTGACGACCTCGTCCTCATCGGGCGTGG
ACGGCGCCTTCTGGGAGTTCACCAAGCACATGAACACCTTCAACTGGCAGGCGTCGTCGAATGCCGTGATGGTGAACCTG
GATGCCTGGAACGCGCTGGAGCCCGAGACCCGCGCTTCCATCGAGGCGACCGCCGCCAGGATGGAGGGCCAGTTCTGGCT
CAACAGCCAGGCCGAGGACGCCAAGAAGCTGGCCGTCCTGCAAGAGCACGGCATCGAGATCACCGAGCCCTCGCCCGAAC
TGCGCGCCGCGCTTCTGGAAAGGGCGAAGCCGCTTTGGGACGATTTCAAGGCGCGGGTGCCGGATGCGGCCGCCTATATC
GACGCCTACCTGACCGCCCGCCAATAG

Upstream 100 bases:

>100_bases
GTTGTTGACAGACCGGATTTCGCTGCGCCAGATTGGCATACAGGTGGTATACTGAAAATTCAAGCATCCTCCTCGCAATC
CGACGAAAAAGGAAAAAATC

Downstream 100 bases:

>100_bases
ACCGGCCCGCCGCAGACCGGCCCACCGCGCCCCGATTCCGTGACGGGGCGCCGCCTGTCCGCAACCGCGACAAGGACAAA
GGACGGAGCCATGCTCGAAA

Product: TRAP dicarboxylate transporter- DctP subunit

Products: NA

Alternate protein names: TRAP Dicarboxylate Transporter DctP Subunit; Trap Dicarboxylate Transporter- Dctp Subunit; TRAP Dicarboxylate Transporter Subunit DctP; TRAP Dicarboxylate Transporter-DctP Subunit; Trap Dicarboxylate Transporter Dctp Subunit; TRAP Dicarboxylate Transporter; Signal Peptide Protein; Exported Protein; Trap Transporter Periplasmic Protein; Twin-Arginine Translocation Pathway Signal; Extracytoplasmic Solute Receptor Of TRAP-Transport System; TRAP System Periplasmic Component; TRAP Transporter; Trap Dicarboxylate Transporter-Dctp Subunit; TRAP-Type C4-Dicarboxylate Transporter Periplasmic Protein; TRAP Transporter Solute Receptor DctP; TRAP-Type Transporter Periplasmic Component; TRAP Transporter Periplasmic Protein; Secreted Protein

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKQGRIFAFAAACAVGLGVSAAVAETAWDMSVVWPEGNFHTQNAIAFAEAVKDVTDGEVVITVHSGGALGIKGPEGMAAV
RDGLVPIADILLNQQVGEAPILGIETLPYLAPTMPDLALLHKFYRPKLEEVAEGMNQKLLYLVPWPGQAVFAPNPINGLD
DMKGLTVRVVDANGSSYFEALGATPVQMPWGEVVPSLAAGTIKGVTTSSSSGVDGAFWEFTKHMNTFNWQASSNAVMVNL
DAWNALEPETRASIEATAARMEGQFWLNSQAEDAKKLAVLQEHGIEITEPSPELRAALLERAKPLWDDFKARVPDAAAYI
DAYLTARQ

Sequences:

>Translated_328_residues
MKQGRIFAFAAACAVGLGVSAAVAETAWDMSVVWPEGNFHTQNAIAFAEAVKDVTDGEVVITVHSGGALGIKGPEGMAAV
RDGLVPIADILLNQQVGEAPILGIETLPYLAPTMPDLALLHKFYRPKLEEVAEGMNQKLLYLVPWPGQAVFAPNPINGLD
DMKGLTVRVVDANGSSYFEALGATPVQMPWGEVVPSLAAGTIKGVTTSSSSGVDGAFWEFTKHMNTFNWQASSNAVMVNL
DAWNALEPETRASIEATAARMEGQFWLNSQAEDAKKLAVLQEHGIEITEPSPELRAALLERAKPLWDDFKARVPDAAAYI
DAYLTARQ
>Mature_328_residues
MKQGRIFAFAAACAVGLGVSAAVAETAWDMSVVWPEGNFHTQNAIAFAEAVKDVTDGEVVITVHSGGALGIKGPEGMAAV
RDGLVPIADILLNQQVGEAPILGIETLPYLAPTMPDLALLHKFYRPKLEEVAEGMNQKLLYLVPWPGQAVFAPNPINGLD
DMKGLTVRVVDANGSSYFEALGATPVQMPWGEVVPSLAAGTIKGVTTSSSSGVDGAFWEFTKHMNTFNWQASSNAVMVNL
DAWNALEPETRASIEATAARMEGQFWLNSQAEDAKKLAVLQEHGIEITEPSPELRAALLERAKPLWDDFKARVPDAAAYI
DAYLTARQ

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35175; Mature: 35175

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQGRIFAFAAACAVGLGVSAAVAETAWDMSVVWPEGNFHTQNAIAFAEAVKDVTDGEVV
CCCCCEEHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEE
ITVHSGGALGIKGPEGMAAVRDGLVPIADILLNQQVGEAPILGIETLPYLAPTMPDLALL
EEEECCCEEECCCCCCHHHHHHCCHHHHHHHHHCCCCCCCEECHHHCCCCCCCCHHHHHH
HKFYRPKLEEVAEGMNQKLLYLVPWPGQAVFAPNPINGLDDMKGLTVRVVDANGSSYFEA
HHHHCCCHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCEEEEEECCCCHHHHH
LGATPVQMPWGEVVPSLAAGTIKGVTTSSSSGVDGAFWEFTKHMNTFNWQASSNAVMVNL
HCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCEEEECCCCEEEEEE
DAWNALEPETRASIEATAARMEGQFWLNSQAEDAKKLAVLQEHGIEITEPSPELRAALLE
CCCCCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
RAKPLWDDFKARVPDAAAYIDAYLTARQ
HCCCCHHHHHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQGRIFAFAAACAVGLGVSAAVAETAWDMSVVWPEGNFHTQNAIAFAEAVKDVTDGEVV
CCCCCEEHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEE
ITVHSGGALGIKGPEGMAAVRDGLVPIADILLNQQVGEAPILGIETLPYLAPTMPDLALL
EEEECCCEEECCCCCCHHHHHHCCHHHHHHHHHCCCCCCCEECHHHCCCCCCCCHHHHHH
HKFYRPKLEEVAEGMNQKLLYLVPWPGQAVFAPNPINGLDDMKGLTVRVVDANGSSYFEA
HHHHCCCHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCEEEEEECCCCHHHHH
LGATPVQMPWGEVVPSLAAGTIKGVTTSSSSGVDGAFWEFTKHMNTFNWQASSNAVMVNL
HCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCEEEECCCCEEEEEE
DAWNALEPETRASIEATAARMEGQFWLNSQAEDAKKLAVLQEHGIEITEPSPELRAALLE
CCCCCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
RAKPLWDDFKARVPDAAAYIDAYLTARQ
HCCCCHHHHHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA