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The map label for this gene is 119386140

Identifier: 119386140

GI number: 119386140

Start: 570897

End: 571439

Strand: Direct

Name: 119386140

Synonym: Pden_3428

Alternate gene names: NA

Gene position: 570897-571439 (Clockwise)

Preceding gene: 119386139

Following gene: 119386141

Centisome position: 33.0

GC content: 66.85

Gene sequence:

>543_bases
ATGCTCGAAACGACTTTCCCTGAAACCCGGCCCTTCGGGTGCATCATCTCAACCATCGACTTCTTGACCGGCATCGGCGG
CTATGCCGCGGCGCTCAGCCTGCTGGGCATCCTCGGGCTGATCCTGGCCGAGATATTCACCCGCAACTTCCTGGCCAGCT
CGCTGCATTTCTCGTGGGATCTGGCGGGGTATCTGATGGGCGCCTGCTTCCTGCTGGGCTGCGGCTCGGCCATGAAGGCG
GGCAGCCATGTGCGCGTGACCGCCCTGATCGAAATCTCGTCCCCCATCGTCGGGCGGGTTCTGGAGATCGCCTCGACGCT
CGTGGGGCTGGCGATATGCGGCGCGCTCAGCTGGGCGCTGATCGACATGGCCGTTCTCTCGGGCCAGCGCGGCTCGACCG
CCGCGACGACCTTCCGTGTGCCGCTGGTCTATCCGCAGGCGGTGCTGGCGGCAGGTGCGGTGCTGTTGACGCTGCAATGC
CTGGCGCAGGTCCTGCGCCTGCTGCGCGGCGAGGCGCTGACCTCCGGTCCCGGTCTGGAATAG

Upstream 100 bases:

>100_bases
CCGCCAATAGACCGGCCCGCCGCAGACCGGCCCACCGCGCCCCGATTCCGTGACGGGGCGCCGCCTGTCCGCAACCGCGA
CAAGGACAAAGGACGGAGCC

Downstream 100 bases:

>100_bases
GGGAAGCCTCGCATGGCAACGATCGTCTTTACCCTGCTTTTCCTGATGGCCGTCCTGCTGGGGTCGGGCATGTGGATCGG
CATCGGCCTGATCGGCACCG

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: Trap-T Family Transporter Small Inner Membrane Subunit

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLETTFPETRPFGCIISTIDFLTGIGGYAAALSLLGILGLILAEIFTRNFLASSLHFSWDLAGYLMGACFLLGCGSAMKA
GSHVRVTALIEISSPIVGRVLEIASTLVGLAICGALSWALIDMAVLSGQRGSTAATTFRVPLVYPQAVLAAGAVLLTLQC
LAQVLRLLRGEALTSGPGLE

Sequences:

>Translated_180_residues
MLETTFPETRPFGCIISTIDFLTGIGGYAAALSLLGILGLILAEIFTRNFLASSLHFSWDLAGYLMGACFLLGCGSAMKA
GSHVRVTALIEISSPIVGRVLEIASTLVGLAICGALSWALIDMAVLSGQRGSTAATTFRVPLVYPQAVLAAGAVLLTLQC
LAQVLRLLRGEALTSGPGLE
>Mature_180_residues
MLETTFPETRPFGCIISTIDFLTGIGGYAAALSLLGILGLILAEIFTRNFLASSLHFSWDLAGYLMGACFLLGCGSAMKA
GSHVRVTALIEISSPIVGRVLEIASTLVGLAICGALSWALIDMAVLSGQRGSTAATTFRVPLVYPQAVLAAGAVLLTLQC
LAQVLRLLRGEALTSGPGLE

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18700; Mature: 18700

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLETTFPETRPFGCIISTIDFLTGIGGYAAALSLLGILGLILAEIFTRNFLASSLHFSWD
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGYLMGACFLLGCGSAMKAGSHVRVTALIEISSPIVGRVLEIASTLVGLAICGALSWAL
HHHHHHHHHHHHHCCHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
IDMAVLSGQRGSTAATTFRVPLVYPQAVLAAGAVLLTLQCLAQVLRLLRGEALTSGPGLE
HHHHHHCCCCCCCCHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLETTFPETRPFGCIISTIDFLTGIGGYAAALSLLGILGLILAEIFTRNFLASSLHFSWD
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGYLMGACFLLGCGSAMKAGSHVRVTALIEISSPIVGRVLEIASTLVGLAICGALSWAL
HHHHHHHHHHHHHCCHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
IDMAVLSGQRGSTAATTFRVPLVYPQAVLAAGAVLLTLQCLAQVLRLLRGEALTSGPGLE
HHHHHHCCCCCCCCHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA