Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357464
Identifier: 119357464
GI number: 119357464
Start: 1890381
End: 1890959
Strand: Direct
Name: 119357464
Synonym: Cpha266_1663
Alternate gene names: NA
Gene position: 1890381-1890959 (Clockwise)
Preceding gene: 119357463
Following gene: 119357465
Centisome position: 60.32
GC content: 47.15
Gene sequence:
>579_bases ATGATGAGCAGTGATCCCTCGCTTTTTTACGCTGACGTATCCCTTGATCTCGCAAAAGGCGAATACCAGTCGGCACAGAA CAAAATCGTCCCCTTTCTGGAAAGATTTGCAGATGCCTATCTGCTCAATCTTTTCTATGCCAGAGCGCTGCGTGGCCTTA AAAACAATAATCTGGCAGCAGACTATTTCCATCGCTGCTGTCGTCTTGCCCCGACAAACGACATCGCCCGCAAAGAGCTG ATCGACCTGCAGACCGCACTGCCCGGCTTGAAGGATAATCAATCAGAAGCATCCGTTGATCTTCTCTCTGAAGAGCTTGA GCAACTCATGGCCGCACTCATTGCTTTTGAACCTGCAAAAACAACGGAAAGCTTTGACCCTACACCTGTTCAGGAGCAAA AACAACCATTTCCTGACGATGCCGTCATAGCCCTCCCTACAGAGAGCCTTGCGGATCTCTTCTCACAGCAGGGTGCCTAT AAAAAAGCGATCAAGGTCTATACCTCGCTGATACAGCTTAAACCAAATAATGCCGAGAATTACAAAAACAGGATTAATGA ACTGCTTGAAAAACTCTAA
Upstream 100 bases:
>100_bases CCACGGCTTTTTGCCGCATCAGGTCTTCCATTCAACGAGCTGGTCGAGAAACTGCTTCAGTTTGCCCTTGAAACACCTTC GGGAGCAAGGAGCTAACCCA
Downstream 100 bases:
>100_bases ACCGGCATTCAGCATAAACCTTTACCCTGGGGGACTGAAACTATTAACAGCAATGCAAGGTAGTGAAGGCATAATGTTTA AAGCAGAAGAAAGATTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MMSSDPSLFYADVSLDLAKGEYQSAQNKIVPFLERFADAYLLNLFYARALRGLKNNNLAADYFHRCCRLAPTNDIARKEL IDLQTALPGLKDNQSEASVDLLSEELEQLMAALIAFEPAKTTESFDPTPVQEQKQPFPDDAVIALPTESLADLFSQQGAY KKAIKVYTSLIQLKPNNAENYKNRINELLEKL
Sequences:
>Translated_192_residues MMSSDPSLFYADVSLDLAKGEYQSAQNKIVPFLERFADAYLLNLFYARALRGLKNNNLAADYFHRCCRLAPTNDIARKEL IDLQTALPGLKDNQSEASVDLLSEELEQLMAALIAFEPAKTTESFDPTPVQEQKQPFPDDAVIALPTESLADLFSQQGAY KKAIKVYTSLIQLKPNNAENYKNRINELLEKL >Mature_192_residues MMSSDPSLFYADVSLDLAKGEYQSAQNKIVPFLERFADAYLLNLFYARALRGLKNNNLAADYFHRCCRLAPTNDIARKEL IDLQTALPGLKDNQSEASVDLLSEELEQLMAALIAFEPAKTTESFDPTPVQEQKQPFPDDAVIALPTESLADLFSQQGAY KKAIKVYTSLIQLKPNNAENYKNRINELLEKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21580; Mature: 21580
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSSDPSLFYADVSLDLAKGEYQSAQNKIVPFLERFADAYLLNLFYARALRGLKNNNLAA CCCCCCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH DYFHRCCRLAPTNDIARKELIDLQTALPGLKDNQSEASVDLLSEELEQLMAALIAFEPAK HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC TTESFDPTPVQEQKQPFPDDAVIALPTESLADLFSQQGAYKKAIKVYTSLIQLKPNNAEN CCCCCCCCCCHHHCCCCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHH YKNRINELLEKL HHHHHHHHHHHC >Mature Secondary Structure MMSSDPSLFYADVSLDLAKGEYQSAQNKIVPFLERFADAYLLNLFYARALRGLKNNNLAA CCCCCCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH DYFHRCCRLAPTNDIARKELIDLQTALPGLKDNQSEASVDLLSEELEQLMAALIAFEPAK HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC TTESFDPTPVQEQKQPFPDDAVIALPTESLADLFSQQGAYKKAIKVYTSLIQLKPNNAEN CCCCCCCCCCHHHCCCCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHH YKNRINELLEKL HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA