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The map label for this gene is tnpB [H]

Identifier: 119357358

GI number: 119357358

Start: 1767096

End: 1767932

Strand: Reverse

Name: tnpB [H]

Synonym: Cpha266_1556

Alternate gene names: 119357358

Gene position: 1767932-1767096 (Counterclockwise)

Preceding gene: 119357359

Following gene: 119357357

Centisome position: 56.41

GC content: 51.25

Gene sequence:

>837_bases
ATGGAAAGAACCATTACCACCATACAGGAACACGCCCGAGAACTTAATCTCACCGGGCTGGCAGGAACCGTCGATCTCCT
GCTCGAAGAAGCGCGCAAAAGCGAACCATCCTACAGTGATTTTGCGCTGACCCTGCTTGAAAGTGAACTCTCCTGCCGAC
GGAAAGCTCATCTTGAACGGCGCCGGAAAATAGCAAACCTTCCGTTGCTCCATGATCTTGATCATTATGACTCGGGAGTG
CAAAACGGGATCAGCCAAGTCCAGCTCCAGCAGTTACGGCAACTGCTCTGGCTCGACCAGAACTTCAACCTGATCCTTAT
CGGGCCAAGCGGAACCGGCAAGAGCTATCTTGCTGGCGGGCTCTGCCATGAAGCGCTGAAACTCGGTTATCACGCACTGT
TCCGCACCATGGATGACCTCATCCAGACTATCAGGTTCAAAGAGATTACAGCGGCGGCAGCAAGAGAGTACAAACGATTG
TTGAGTGCGCATCTGCTGGTTATCGACGACATCATGATGTTCCCGCTGGAAAAAAGTGTTGCCGTCGGGCTGTTCCAGCT
TGTCAACCAACTGCATGAACAGACATCATTCATCATTACCACCAATAAAAGCCCGAAAGAGTGGGCAGAGATGCTTGGCG
ACGAGGTTCTTGCGACGGCTCTGCTTGATCGGCTGCTCTACAAGTGCGAAGTCATTAAACTGACCGGCAAGAGCTACCGG
CTCGAACACCGGACAACCATCTTCGAACAACAACAATCGCCGGAAGGAGGGGGCAATCGTAGAAAAAAGCAACTACCACT
TCAAAAAGGAGTAGGAAATCATTGCAAAATGACGTAA

Upstream 100 bases:

>100_bases
TCCGCCCGAAAACACTCCGAAGTGATATGGACAGGATGCTCTCGTTCGTGCCGGACAGCAGTGGCATAACCACCTATGAA
AACATTTTCAGTTAACGACC

Downstream 100 bases:

>100_bases
TTTAAAGCCGCTGCCTGGGTGATTGCTAATTTCCGAAATTGGCTGATTTTTAATTTCCGACTACAACAGCGCTGACTATC
CTGAAAAAAGAGACTACCAG

Product: IstB ATP binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MERTITTIQEHARELNLTGLAGTVDLLLEEARKSEPSYSDFALTLLESELSCRRKAHLERRRKIANLPLLHDLDHYDSGV
QNGISQVQLQQLRQLLWLDQNFNLILIGPSGTGKSYLAGGLCHEALKLGYHALFRTMDDLIQTIRFKEITAAAAREYKRL
LSAHLLVIDDIMMFPLEKSVAVGLFQLVNQLHEQTSFIITTNKSPKEWAEMLGDEVLATALLDRLLYKCEVIKLTGKSYR
LEHRTTIFEQQQSPEGGGNRRKKQLPLQKGVGNHCKMT

Sequences:

>Translated_278_residues
MERTITTIQEHARELNLTGLAGTVDLLLEEARKSEPSYSDFALTLLESELSCRRKAHLERRRKIANLPLLHDLDHYDSGV
QNGISQVQLQQLRQLLWLDQNFNLILIGPSGTGKSYLAGGLCHEALKLGYHALFRTMDDLIQTIRFKEITAAAAREYKRL
LSAHLLVIDDIMMFPLEKSVAVGLFQLVNQLHEQTSFIITTNKSPKEWAEMLGDEVLATALLDRLLYKCEVIKLTGKSYR
LEHRTTIFEQQQSPEGGGNRRKKQLPLQKGVGNHCKMT
>Mature_278_residues
MERTITTIQEHARELNLTGLAGTVDLLLEEARKSEPSYSDFALTLLESELSCRRKAHLERRRKIANLPLLHDLDHYDSGV
QNGISQVQLQQLRQLLWLDQNFNLILIGPSGTGKSYLAGGLCHEALKLGYHALFRTMDDLIQTIRFKEITAAAAREYKRL
LSAHLLVIDDIMMFPLEKSVAVGLFQLVNQLHEQTSFIITTNKSPKEWAEMLGDEVLATALLDRLLYKCEVIKLTGKSYR
LEHRTTIFEQQQSPEGGGNRRKKQLPLQKGVGNHCKMT

Specific function: This Protein Is Required For Chromosomal Replication. It Forms, In Concert With DNAb Protein And Other Prepriming Proteins DNAt, N, N', N'' A Prepriming Protein Complex On The Specific Site Of The Template DNA Recognized By Protein N'. [C]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 31576; Mature: 31576

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTITTIQEHARELNLTGLAGTVDLLLEEARKSEPSYSDFALTLLESELSCRRKAHLER
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRKIANLPLLHDLDHYDSGVQNGISQVQLQQLRQLLWLDQNFNLILIGPSGTGKSYLAGG
HHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
LCHEALKLGYHALFRTMDDLIQTIRFKEITAAAAREYKRLLSAHLLVIDDIMMFPLEKSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AVGLFQLVNQLHEQTSFIITTNKSPKEWAEMLGDEVLATALLDRLLYKCEVIKLTGKSYR
HHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEE
LEHRTTIFEQQQSPEGGGNRRKKQLPLQKGVGNHCKMT
HHHHHHHHHHHCCCCCCCCCHHHCCCHHHCCCCCCCCC
>Mature Secondary Structure
MERTITTIQEHARELNLTGLAGTVDLLLEEARKSEPSYSDFALTLLESELSCRRKAHLER
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRKIANLPLLHDLDHYDSGVQNGISQVQLQQLRQLLWLDQNFNLILIGPSGTGKSYLAGG
HHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
LCHEALKLGYHALFRTMDDLIQTIRFKEITAAAAREYKRLLSAHLLVIDDIMMFPLEKSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AVGLFQLVNQLHEQTSFIITTNKSPKEWAEMLGDEVLATALLDRLLYKCEVIKLTGKSYR
HHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEE
LEHRTTIFEQQQSPEGGGNRRKKQLPLQKGVGNHCKMT
HHHHHHHHHHHCCCCCCCCCHHHCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7517394 [H]