Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119357357

Identifier: 119357357

GI number: 119357357

Start: 1766142

End: 1766948

Strand: Reverse

Name: 119357357

Synonym: Cpha266_1555

Alternate gene names: NA

Gene position: 1766948-1766142 (Counterclockwise)

Preceding gene: 119357358

Following gene: 119357356

Centisome position: 56.38

GC content: 50.19

Gene sequence:

>807_bases
ATGGAGGTGAAGATGAACAGCTCTCCTGCATTGCGGGGCATGTGTTTTCGTCTGTTTTTATTGTTCATGATTACTGTTGG
TGCCGGTTGTGCAAAAACCGAAGCTCCAGCACCGGAAGCTTATCAGTTGCCTGAGGCGTCACCTGCTGCTGAACAAACTC
CTGAAGCTCCCCAAGGTCCACAAGCTCCGTCAAAAACAGCGAATGTTATGCCGAATTTTGAGTGGCCCCCGCCTGAAGCT
TCCGCTGAAGAGGTTATTCCTGATGTGTTTTTAAGAAAATCCGGAAAGGATTCGGTTCTTTTCCGTGACGTTGACCACAT
TCTCACGTCAGCGCTTGATCGGTGCGGTTACTCGGATTGCAGTTATTATGCTGTTCCTGGCGGGTTTGCCGTGGTTACCC
GCATTGAGCAGATAAACAGTGACGGGACGCCGAAACCGGGGGATAGCAGGTGGTCGGTGAAAACGCCGCCAATAAGCCCG
TTTTCTGATTTTCCCCAATACTTGAAGGTGCTTTTTAAAGGCAATCCCGGCTATTATCGTGTTATCGTTTTTATTTTCAC
TCCCTATGGATTTACCCAGGGAGCAAAGGGCCCGAGCAGGGAGGTTGTTGAAGGGTGGTTCAGCGGAGGGTTTAATGTTC
TCCCGGAAGAAGCAGGAGCGCTGCTTTATACGAAAGCGCATCGGTGCACCGCGCTGATCTATGAGTTTAAAAAAACAGCG
AAGCAGGCAACCCTGATCATTCCGGGGAGTATAACAGGAAAGGCTCATCTTGAGCGGTCCCGACTGTGGAGCGTTTTACA
ACGGTAA

Upstream 100 bases:

>100_bases
TTTTAATTTCCGACTACAACAGCGCTGACTATCCTGAAAAAAGAGACTACCAGGGCGGTTATGGGGTGGATGGAAAGGGA
TTGCTAACCTGGAATAAAAA

Downstream 100 bases:

>100_bases
ACTGGAGGGGTTATGAGCAGATCGAAACTGATACTTGCGTGTAAAAAAAACCTGCTTGTCACCTGGCTGGCAGGTGCCGG
TCTATTGGCAGCCGTGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MEVKMNSSPALRGMCFRLFLLFMITVGAGCAKTEAPAPEAYQLPEASPAAEQTPEAPQGPQAPSKTANVMPNFEWPPPEA
SAEEVIPDVFLRKSGKDSVLFRDVDHILTSALDRCGYSDCSYYAVPGGFAVVTRIEQINSDGTPKPGDSRWSVKTPPISP
FSDFPQYLKVLFKGNPGYYRVIVFIFTPYGFTQGAKGPSREVVEGWFSGGFNVLPEEAGALLYTKAHRCTALIYEFKKTA
KQATLIIPGSITGKAHLERSRLWSVLQR

Sequences:

>Translated_268_residues
MEVKMNSSPALRGMCFRLFLLFMITVGAGCAKTEAPAPEAYQLPEASPAAEQTPEAPQGPQAPSKTANVMPNFEWPPPEA
SAEEVIPDVFLRKSGKDSVLFRDVDHILTSALDRCGYSDCSYYAVPGGFAVVTRIEQINSDGTPKPGDSRWSVKTPPISP
FSDFPQYLKVLFKGNPGYYRVIVFIFTPYGFTQGAKGPSREVVEGWFSGGFNVLPEEAGALLYTKAHRCTALIYEFKKTA
KQATLIIPGSITGKAHLERSRLWSVLQR
>Mature_268_residues
MEVKMNSSPALRGMCFRLFLLFMITVGAGCAKTEAPAPEAYQLPEASPAAEQTPEAPQGPQAPSKTANVMPNFEWPPPEA
SAEEVIPDVFLRKSGKDSVLFRDVDHILTSALDRCGYSDCSYYAVPGGFAVVTRIEQINSDGTPKPGDSRWSVKTPPISP
FSDFPQYLKVLFKGNPGYYRVIVFIFTPYGFTQGAKGPSREVVEGWFSGGFNVLPEEAGALLYTKAHRCTALIYEFKKTA
KQATLIIPGSITGKAHLERSRLWSVLQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29405; Mature: 29405

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVKMNSSPALRGMCFRLFLLFMITVGAGCAKTEAPAPEAYQLPEASPAAEQTPEAPQGP
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
QAPSKTANVMPNFEWPPPEASAEEVIPDVFLRKSGKDSVLFRDVDHILTSALDRCGYSDC
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
SYYAVPGGFAVVTRIEQINSDGTPKPGDSRWSVKTPPISPFSDFPQYLKVLFKGNPGYYR
CEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEE
VIVFIFTPYGFTQGAKGPSREVVEGWFSGGFNVLPEEAGALLYTKAHRCTALIYEFKKTA
EEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH
KQATLIIPGSITGKAHLERSRLWSVLQR
HHEEEEECCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEVKMNSSPALRGMCFRLFLLFMITVGAGCAKTEAPAPEAYQLPEASPAAEQTPEAPQGP
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
QAPSKTANVMPNFEWPPPEASAEEVIPDVFLRKSGKDSVLFRDVDHILTSALDRCGYSDC
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
SYYAVPGGFAVVTRIEQINSDGTPKPGDSRWSVKTPPISPFSDFPQYLKVLFKGNPGYYR
CEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEE
VIVFIFTPYGFTQGAKGPSREVVEGWFSGGFNVLPEEAGALLYTKAHRCTALIYEFKKTA
EEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH
KQATLIIPGSITGKAHLERSRLWSVLQR
HHEEEEECCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA