Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357356
Identifier: 119357356
GI number: 119357356
Start: 1765665
End: 1766129
Strand: Reverse
Name: 119357356
Synonym: Cpha266_1554
Alternate gene names: NA
Gene position: 1766129-1765665 (Counterclockwise)
Preceding gene: 119357357
Following gene: 119357351
Centisome position: 56.36
GC content: 47.74
Gene sequence:
>465_bases ATGAGCAGATCGAAACTGATACTTGCGTGTAAAAAAAACCTGCTTGTCACCTGGCTGGCAGGTGCCGGTCTATTGGCAGC CGTGTTGATCGGTCAGACCATGAGCGGATTGTATGTCGATCATGCCGGTGATGCATGGGGTTGGTTTCTGCCAAATGTGA TGCCGACACTGTCGTTAATGATTGGTGCCGTGGTGAAGGATTTCAGCGGTGGATCGGATGAAAAAAAAACGGTAGATCCC TTTATCTATCAATTGAGTCTCGGGCTCTCTGTTGCCTATTTTGTCGTTATGGCGTCAAGTATTATGCTCCATCCGTCCTT TTGTTCAGACTGCGATTCTACTCTTGTTTTTCTTCAACAGTCGAACTTATGGCTTGGTCCTATGCAGGGGCTGGTGACGG GAGCTCTCGGATTCTTTTTTGTGAAGGCCGAGCAGGTCGGGAAGGTTTCGACTGAAAAAAAATGA
Upstream 100 bases:
>100_bases GAAGCAGGCAACCCTGATCATTCCGGGGAGTATAACAGGAAAGGCTCATCTTGAGCGGTCCCGACTGTGGAGCGTTTTAC AACGGTAAACTGGAGGGGTT
Downstream 100 bases:
>100_bases GTTTAGTTGCCCATATTGAGTGCTTTTTCGGAGATGACCTGTTCGATATTCCCTGAGATGGAGAGGCTCCGCATGAGGTC GAGCAGGTTCTGCTCGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSRSKLILACKKNLLVTWLAGAGLLAAVLIGQTMSGLYVDHAGDAWGWFLPNVMPTLSLMIGAVVKDFSGGSDEKKTVDP FIYQLSLGLSVAYFVVMASSIMLHPSFCSDCDSTLVFLQQSNLWLGPMQGLVTGALGFFFVKAEQVGKVSTEKK
Sequences:
>Translated_154_residues MSRSKLILACKKNLLVTWLAGAGLLAAVLIGQTMSGLYVDHAGDAWGWFLPNVMPTLSLMIGAVVKDFSGGSDEKKTVDP FIYQLSLGLSVAYFVVMASSIMLHPSFCSDCDSTLVFLQQSNLWLGPMQGLVTGALGFFFVKAEQVGKVSTEKK >Mature_153_residues SRSKLILACKKNLLVTWLAGAGLLAAVLIGQTMSGLYVDHAGDAWGWFLPNVMPTLSLMIGAVVKDFSGGSDEKKTVDPF IYQLSLGLSVAYFVVMASSIMLHPSFCSDCDSTLVFLQQSNLWLGPMQGLVTGALGFFFVKAEQVGKVSTEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16572; Mature: 16441
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSKLILACKKNLLVTWLAGAGLLAAVLIGQTMSGLYVDHAGDAWGWFLPNVMPTLSLM CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHH IGAVVKDFSGGSDEKKTVDPFIYQLSLGLSVAYFVVMASSIMLHPSFCSDCDSTLVFLQQ HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEC SNLWLGPMQGLVTGALGFFFVKAEQVGKVSTEKK CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SRSKLILACKKNLLVTWLAGAGLLAAVLIGQTMSGLYVDHAGDAWGWFLPNVMPTLSLM CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHH IGAVVKDFSGGSDEKKTVDPFIYQLSLGLSVAYFVVMASSIMLHPSFCSDCDSTLVFLQQ HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEC SNLWLGPMQGLVTGALGFFFVKAEQVGKVSTEKK CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA