Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357355
Identifier: 119357355
GI number: 119357355
Start: 1762987
End: 1765662
Strand: Direct
Name: 119357355
Synonym: Cpha266_1553
Alternate gene names: NA
Gene position: 1762987-1765662 (Clockwise)
Preceding gene: 119357354
Following gene: 119357361
Centisome position: 56.26
GC content: 47.16
Gene sequence:
>2676_bases GTGAAATGGCCGCTGAAAATCATCGCGGTTCTGCTGTTGCTGGCGCTCCTTGTTCCGGCAGCAGCATGGATTTCCTTTCC ATGGTATGCCCAGTCTCTGATTGACCGGGCTCTTCAGGGAAAACCTTTTCGCGTTGAGGTATCGGGTGTGGGCATTCCCT TACCGGGCAGCATAGGGTTCCGTTCTGTCAAACTTGTATTTATAACCCCACCCGACAACTGCATACCTGCAGCGACAACC TATACCATTAATCTCGGTAGCGGAAAACTCTCATGGATTACTGAAAGTGAAGAAAAAGGGATTACGAGCAGCATCATCCC GCATAAACTTCATGCAGATCTCACCCTTGAGGCAGACTCACTTCACCTGCTTCCCGATCCAGAAAACTTCACATTCGAAG ACGGTAACCCCCGCATAAGCATAAAACTCAATATCCTGCGCAAGAAAGGACTTTCAATGGAATTTCATCCACTTGATATC GCCTATAGTATCGGAAGTGCGACTGTAAAAAAAGACAAGCTCCAACTGTCAGGCCTTAATTACGATATACACGTTGCACG TGCTGAGGGTTGGCAGCAACCTCTCGATACGCTTACCGTTGCAAAACTTTACAGCGACGGCAACCCTTCTCCTGCAGGCA ACTTCAGAGCCTTGTTCGGATCGAAACGAAACTCATTCAAACCATGCTCGCTCATTCTCAGTAACTGCTCAGTCGATCTT TTTCAATGGAATGCAACTTCTGACCATATCGAATACGATCTGAAAGAACAGAAAACCCGCTTTACCCTTAACCTTGCGGA AATTCCGCTGAACGAACTGCCGGGGTTCAAACAGGCAGGAAAAAATACAGTATCCGCAGAAGGAACATTGAGCGGAGCCA TCCCTGTTGAGTTTCAGGACTCTACCGTACAAGTGCGCAATGCAGTGGTTGTTGCCGGAAAAGGATCCACTATCGTCTAT TATACCAGTCATAACAAACCCTGGTTTTCCCTGAGTATTGGGCCTCAAAATAGCGCAGGAGAACTCCTGAAAAATTTCAA TGCTACTATCATACTCAACAGTCGGCACAAAAATCTCTCCGGTATTGCCGTTCAGAACATTTCAACCGATATTTTTGAAG GGACCCTCAATTCATCACCATTTTTTTTCGATCCGGCAAAAAACGAAATGATGATGACGCTCACCATGAACAACATCCGC TTGCCAGACCACCTTACCTGGCACGGTGAATCCAGGGGCACCTTCAGCGGAGGAGTAAGCGGAACAATTCCTGTTACGTA CGGGAAAAAAGGGATTTTATTCGGAAACACCCATCTTGTTTCAACTCTCACATTCAGAGACATCTCCCTCAACTCCCTGC CCGGGCTGAGCAGAGAAGGCACAAAAACTCCTTTTGCCTCGGGAAACATCAATGGAGTCCTGCCAATCGAATTTCGCGAT TCAACGCTGCTGATTCGCAAAGGAATGGTTGAGGGTGAAAAAGGTTCAAAAATTATTTTCTACGATAAAAAGAACCAACC GTTACTCTCCTTTGATCTTGGCACGAAAAAAGAGGGCGGCAGGCTGCTCAAAAACCTTAACGGTTCCTTCACCTTCATAA ACGGCAGCAAAAAAAATGCTGCGATTGACATAAAGAATCTTTCAACCGAAATATTCGGAGGAACACTCAATGCAACTCCC TTTACATTCGGCAACGCCGGAAAAAGCGCATCGCTGACCATCAAGTTGAATAAGATAAGCGCTCTTGACCGGGTAAAACT CTATGGAGAGTTCAAGGCTGCTCTTCAGGGAGATATAACAGGAACGGTTCCTCTTTCAATCGGCAATAAAAGCTTTTCGA TTACCAAAGCCCGACTCTTGTCAAAAGGAGGGGGAACCATCAGCATAACCCCTAAAACCACGAAGCAGACAACCTCGGAA CGCATCATGGGCGCATCGAAACCTGACGCCGATTACCTGTTCAGCGAACCTGGTCTTTGGTTCAGCCGCTCGTTCGATGG AACATTGGTTGCCGATTTTGCCATGAAAAAATTCGTCCACCGAAACTCGGGTGGCGAACTGATCCTGAGTTCACCAAAAG GAAAAGCCGTACTCTGGCGCAACAAAAAGAACCCGGATCTGATAACTCTTGAAAATTTCAGCGCAGGCTTTTTCGATGGC ACAATCGGCATCCAAAAGGCAGACTATGATATGGTTAAAAAAAGCACTGAAACAACAATTGCACTCAACGGCATTCCCAT TCAGAAACTGCTTGACCTGCAGGGAACAAAAAAAATATATGCGACGGGTGCAATAAAGGGAACGCTGCCCGTCAAAATCA AAGACCAAGTATTCGAGATACTTGACGGCGACATGGCTGCCGAAGAGAACGGACAGATCATTTACGCAACGACTCCGGAA GAGCGTGCAGCTGCTAATCAGGGGCTGCGAACAACCTATGAAGCCCTCTCAAACTTTCTCTATGCCGAGCTGTTCAGTTC GATAACCATGGCTCCGGATGGCAAATCACACATTAATATCCAGCTCAAGGGCGCAAACCCGGACTATCAGGCAGGACGAC CCATAGAGCTGAACCTGAACATCGAGCAGAACCTGCTCGACCTCATGCGGAGCCTCTCCATCTCAGGGAATATCGAACAG GTCATCTCCGAAAAAGCACTCAATATGGGCAACTAA
Upstream 100 bases:
>100_bases TCCAGAAAATCTACACCCGACTCCCTGCAGGAACATGGGTACAGGTCCAGGGGAAATGGACAAAAAAAGCCCGATAACCG CCCGATAAGCCTGTTGAACG
Downstream 100 bases:
>100_bases ACTCATTTTTTTTCAGTCGAAACCTTCCCGACCTGCTCGGCCTTCACAAAAAAGAATCCGAGAGCTCCCGTCACCAGCCC CTGCATAGGACCAAGCCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 891; Mature: 891
Protein sequence:
>891_residues MKWPLKIIAVLLLLALLVPAAAWISFPWYAQSLIDRALQGKPFRVEVSGVGIPLPGSIGFRSVKLVFITPPDNCIPAATT YTINLGSGKLSWITESEEKGITSSIIPHKLHADLTLEADSLHLLPDPENFTFEDGNPRISIKLNILRKKGLSMEFHPLDI AYSIGSATVKKDKLQLSGLNYDIHVARAEGWQQPLDTLTVAKLYSDGNPSPAGNFRALFGSKRNSFKPCSLILSNCSVDL FQWNATSDHIEYDLKEQKTRFTLNLAEIPLNELPGFKQAGKNTVSAEGTLSGAIPVEFQDSTVQVRNAVVVAGKGSTIVY YTSHNKPWFSLSIGPQNSAGELLKNFNATIILNSRHKNLSGIAVQNISTDIFEGTLNSSPFFFDPAKNEMMMTLTMNNIR LPDHLTWHGESRGTFSGGVSGTIPVTYGKKGILFGNTHLVSTLTFRDISLNSLPGLSREGTKTPFASGNINGVLPIEFRD STLLIRKGMVEGEKGSKIIFYDKKNQPLLSFDLGTKKEGGRLLKNLNGSFTFINGSKKNAAIDIKNLSTEIFGGTLNATP FTFGNAGKSASLTIKLNKISALDRVKLYGEFKAALQGDITGTVPLSIGNKSFSITKARLLSKGGGTISITPKTTKQTTSE RIMGASKPDADYLFSEPGLWFSRSFDGTLVADFAMKKFVHRNSGGELILSSPKGKAVLWRNKKNPDLITLENFSAGFFDG TIGIQKADYDMVKKSTETTIALNGIPIQKLLDLQGTKKIYATGAIKGTLPVKIKDQVFEILDGDMAAEENGQIIYATTPE ERAAANQGLRTTYEALSNFLYAELFSSITMAPDGKSHINIQLKGANPDYQAGRPIELNLNIEQNLLDLMRSLSISGNIEQ VISEKALNMGN
Sequences:
>Translated_891_residues MKWPLKIIAVLLLLALLVPAAAWISFPWYAQSLIDRALQGKPFRVEVSGVGIPLPGSIGFRSVKLVFITPPDNCIPAATT YTINLGSGKLSWITESEEKGITSSIIPHKLHADLTLEADSLHLLPDPENFTFEDGNPRISIKLNILRKKGLSMEFHPLDI AYSIGSATVKKDKLQLSGLNYDIHVARAEGWQQPLDTLTVAKLYSDGNPSPAGNFRALFGSKRNSFKPCSLILSNCSVDL FQWNATSDHIEYDLKEQKTRFTLNLAEIPLNELPGFKQAGKNTVSAEGTLSGAIPVEFQDSTVQVRNAVVVAGKGSTIVY YTSHNKPWFSLSIGPQNSAGELLKNFNATIILNSRHKNLSGIAVQNISTDIFEGTLNSSPFFFDPAKNEMMMTLTMNNIR LPDHLTWHGESRGTFSGGVSGTIPVTYGKKGILFGNTHLVSTLTFRDISLNSLPGLSREGTKTPFASGNINGVLPIEFRD STLLIRKGMVEGEKGSKIIFYDKKNQPLLSFDLGTKKEGGRLLKNLNGSFTFINGSKKNAAIDIKNLSTEIFGGTLNATP FTFGNAGKSASLTIKLNKISALDRVKLYGEFKAALQGDITGTVPLSIGNKSFSITKARLLSKGGGTISITPKTTKQTTSE RIMGASKPDADYLFSEPGLWFSRSFDGTLVADFAMKKFVHRNSGGELILSSPKGKAVLWRNKKNPDLITLENFSAGFFDG TIGIQKADYDMVKKSTETTIALNGIPIQKLLDLQGTKKIYATGAIKGTLPVKIKDQVFEILDGDMAAEENGQIIYATTPE ERAAANQGLRTTYEALSNFLYAELFSSITMAPDGKSHINIQLKGANPDYQAGRPIELNLNIEQNLLDLMRSLSISGNIEQ VISEKALNMGN >Mature_891_residues MKWPLKIIAVLLLLALLVPAAAWISFPWYAQSLIDRALQGKPFRVEVSGVGIPLPGSIGFRSVKLVFITPPDNCIPAATT YTINLGSGKLSWITESEEKGITSSIIPHKLHADLTLEADSLHLLPDPENFTFEDGNPRISIKLNILRKKGLSMEFHPLDI AYSIGSATVKKDKLQLSGLNYDIHVARAEGWQQPLDTLTVAKLYSDGNPSPAGNFRALFGSKRNSFKPCSLILSNCSVDL FQWNATSDHIEYDLKEQKTRFTLNLAEIPLNELPGFKQAGKNTVSAEGTLSGAIPVEFQDSTVQVRNAVVVAGKGSTIVY YTSHNKPWFSLSIGPQNSAGELLKNFNATIILNSRHKNLSGIAVQNISTDIFEGTLNSSPFFFDPAKNEMMMTLTMNNIR LPDHLTWHGESRGTFSGGVSGTIPVTYGKKGILFGNTHLVSTLTFRDISLNSLPGLSREGTKTPFASGNINGVLPIEFRD STLLIRKGMVEGEKGSKIIFYDKKNQPLLSFDLGTKKEGGRLLKNLNGSFTFINGSKKNAAIDIKNLSTEIFGGTLNATP FTFGNAGKSASLTIKLNKISALDRVKLYGEFKAALQGDITGTVPLSIGNKSFSITKARLLSKGGGTISITPKTTKQTTSE RIMGASKPDADYLFSEPGLWFSRSFDGTLVADFAMKKFVHRNSGGELILSSPKGKAVLWRNKKNPDLITLENFSAGFFDG TIGIQKADYDMVKKSTETTIALNGIPIQKLLDLQGTKKIYATGAIKGTLPVKIKDQVFEILDGDMAAEENGQIIYATTPE ERAAANQGLRTTYEALSNFLYAELFSSITMAPDGKSHINIQLKGANPDYQAGRPIELNLNIEQNLLDLMRSLSISGNIEQ VISEKALNMGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97034; Mature: 97034
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWPLKIIAVLLLLALLVPAAAWISFPWYAQSLIDRALQGKPFRVEVSGVGIPLPGSIGF CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC RSVKLVFITPPDNCIPAATTYTINLGSGKLSWITESEEKGITSSIIPHKLHADLTLEADS EEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHCCCEEECCEEEEECCC LHLLPDPENFTFEDGNPRISIKLNILRKKGLSMEFHPLDIAYSIGSATVKKDKLQLSGLN EEECCCCCCCEEECCCCEEEEEEEEEECCCCCEEEECEEEEEECCCCEEEECEEEEECCC YDIHVARAEGWQQPLDTLTVAKLYSDGNPSPAGNFRALFGSKRNSFKPCSLILSNCSVDL EEEEEEECCCCCCHHHHHEEEHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCEEE FQWNATSDHIEYDLKEQKTRFTLNLAEIPLNELPGFKQAGKNTVSAEGTLSGAIPVEFQD EEECCCCCCEEECCCCCCEEEEEEEECCCHHHCCCHHHHCCCCCCCCCEECCCEEEEECC STVQVRNAVVVAGKGSTIVYYTSHNKPWFSLSIGPQNSAGELLKNFNATIILNSRHKNLS CEEEEEEEEEEEECCCEEEEEECCCCCEEEEEECCCCCHHHHHHCCCEEEEEECCCCCCC GIAVQNISTDIFEGTLNSSPFFFDPAKNEMMMTLTMNNIRLPDHLTWHGESRGTFSGGVS CEEEECCCCHHHCCCCCCCCEEECCCCCCEEEEEEECCEECCCCEEEECCCCCCCCCCCC GTIPVTYGKKGILFGNTHLVSTLTFRDISLNSLPGLSREGTKTPFASGNINGVLPIEFRD EEEEEEECCCEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC STLLIRKGMVEGEKGSKIIFYDKKNQPLLSFDLGTKKEGGRLLKNLNGSFTFINGSKKNA CEEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHCCCCEEEEECCCCCE AIDIKNLSTEIFGGTLNATPFTFGNAGKSASLTIKLNKISALDRVKLYGEFKAALQGDIT EEEEECCCHHHCCCCCCCCCEEECCCCCCEEEEEEEECCCCCHHEEEEEHHHHHHCCCCE GTVPLSIGNKSFSITKARLLSKGGGTISITPKTTKQTTSERIMGASKPDADYLFSEPGLW EEEEEEECCCCEEEEHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCCCEEECCCCCE FSRSFDGTLVADFAMKKFVHRNSGGELILSSPKGKAVLWRNKKNPDLITLENFSAGFFDG EECCCCCEEEHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCCEECC TIGIQKADYDMVKKSTETTIALNGIPIQKLLDLQGTKKIYATGAIKGTLPVKIKDQVFEI EEEEEECCHHHHHCCCCCEEEECCCCHHHHHCCCCCCEEEEEEEECCEEEEEEHHHHHHH LDGDMAAEENGQIIYATTPEERAAANQGLRTTYEALSNFLYAELFSSITMAPDGKSHINI HCCCCCCCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEE QLKGANPDYQAGRPIELNLNIEQNLLDLMRSLSISGNIEQVISEKALNMGN EEECCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKWPLKIIAVLLLLALLVPAAAWISFPWYAQSLIDRALQGKPFRVEVSGVGIPLPGSIGF CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC RSVKLVFITPPDNCIPAATTYTINLGSGKLSWITESEEKGITSSIIPHKLHADLTLEADS EEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHCCCEEECCEEEEECCC LHLLPDPENFTFEDGNPRISIKLNILRKKGLSMEFHPLDIAYSIGSATVKKDKLQLSGLN EEECCCCCCCEEECCCCEEEEEEEEEECCCCCEEEECEEEEEECCCCEEEECEEEEECCC YDIHVARAEGWQQPLDTLTVAKLYSDGNPSPAGNFRALFGSKRNSFKPCSLILSNCSVDL EEEEEEECCCCCCHHHHHEEEHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCEEE FQWNATSDHIEYDLKEQKTRFTLNLAEIPLNELPGFKQAGKNTVSAEGTLSGAIPVEFQD EEECCCCCCEEECCCCCCEEEEEEEECCCHHHCCCHHHHCCCCCCCCCEECCCEEEEECC STVQVRNAVVVAGKGSTIVYYTSHNKPWFSLSIGPQNSAGELLKNFNATIILNSRHKNLS CEEEEEEEEEEEECCCEEEEEECCCCCEEEEEECCCCCHHHHHHCCCEEEEEECCCCCCC GIAVQNISTDIFEGTLNSSPFFFDPAKNEMMMTLTMNNIRLPDHLTWHGESRGTFSGGVS CEEEECCCCHHHCCCCCCCCEEECCCCCCEEEEEEECCEECCCCEEEECCCCCCCCCCCC GTIPVTYGKKGILFGNTHLVSTLTFRDISLNSLPGLSREGTKTPFASGNINGVLPIEFRD EEEEEEECCCEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC STLLIRKGMVEGEKGSKIIFYDKKNQPLLSFDLGTKKEGGRLLKNLNGSFTFINGSKKNA CEEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHCCCCEEEEECCCCCE AIDIKNLSTEIFGGTLNATPFTFGNAGKSASLTIKLNKISALDRVKLYGEFKAALQGDIT EEEEECCCHHHCCCCCCCCCEEECCCCCCEEEEEEEECCCCCHHEEEEEHHHHHHCCCCE GTVPLSIGNKSFSITKARLLSKGGGTISITPKTTKQTTSERIMGASKPDADYLFSEPGLW EEEEEEECCCCEEEEHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCCCEEECCCCCE FSRSFDGTLVADFAMKKFVHRNSGGELILSSPKGKAVLWRNKKNPDLITLENFSAGFFDG EECCCCCEEEHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCCEECC TIGIQKADYDMVKKSTETTIALNGIPIQKLLDLQGTKKIYATGAIKGTLPVKIKDQVFEI EEEEEECCHHHHHCCCCCEEEECCCCHHHHHCCCCCCEEEEEEEECCEEEEEEHHHHHHH LDGDMAAEENGQIIYATTPEERAAANQGLRTTYEALSNFLYAELFSSITMAPDGKSHINI HCCCCCCCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEE QLKGANPDYQAGRPIELNLNIEQNLLDLMRSLSISGNIEQVISEKALNMGN EEECCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA