Click here to switch to the map view.

The map label for this gene is ydbL [C]

Identifier: 119357354

GI number: 119357354

Start: 1762610

End: 1762963

Strand: Direct

Name: ydbL [C]

Synonym: Cpha266_1552

Alternate gene names: 119357354

Gene position: 1762610-1762963 (Clockwise)

Preceding gene: 119357353

Following gene: 119357355

Centisome position: 56.24

GC content: 52.54

Gene sequence:

>354_bases
ATGACTTTTTCAGCGATAAAAAAACCGCTTTTCAGCGTTTTCGTACTTATGATGGTTGTTATCGGCCTCTCGCTCCCGGC
CTATGCGCTTGATCTTGAAACCGCCCGGTCGCAGGGGCTCGCCGGTGAGGTAGACAATGGACTTCTTGCCGTCCCCCCGG
GATCTCCTGGCGACGCTCAGGGACTTATCGGGACCATTAACAACCAGCGGCGAGCAGAATACGCAAAGGTTGCGGCAGAA
AACAATCTCTCGCTCGATGTTGTAGGAGGAATGATGTTCCAGAAAATCTACACCCGACTCCCTGCAGGAACATGGGTACA
GGTCCAGGGGAAATGGACAAAAAAAGCCCGATAA

Upstream 100 bases:

>100_bases
AACATCAAAATCGATCATGAAATCAGAATCAAGGTTGACCGTGAACTCGACTCTCTTCTTGACAATAAGAAAGGTTTATT
CTAATAAGGAGGATGTAAAA

Downstream 100 bases:

>100_bases
CCGCCCGATAAGCCTGTTGAACGGTGAAATGGCCGCTGAAAATCATCGCGGTTCTGCTGTTGCTGGCGCTCCTTGTTCCG
GCAGCAGCATGGATTTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MTFSAIKKPLFSVFVLMMVVIGLSLPAYALDLETARSQGLAGEVDNGLLAVPPGSPGDAQGLIGTINNQRRAEYAKVAAE
NNLSLDVVGGMMFQKIYTRLPAGTWVQVQGKWTKKAR

Sequences:

>Translated_117_residues
MTFSAIKKPLFSVFVLMMVVIGLSLPAYALDLETARSQGLAGEVDNGLLAVPPGSPGDAQGLIGTINNQRRAEYAKVAAE
NNLSLDVVGGMMFQKIYTRLPAGTWVQVQGKWTKKAR
>Mature_116_residues
TFSAIKKPLFSVFVLMMVVIGLSLPAYALDLETARSQGLAGEVDNGLLAVPPGSPGDAQGLIGTINNQRRAEYAKVAAEN
NLSLDVVGGMMFQKIYTRLPAGTWVQVQGKWTKKAR

Specific function: Unknown

COG id: COG3784

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081895, Length=104, Percent_Identity=35.5769230769231, Blast_Score=63, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12567; Mature: 12436

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSAIKKPLFSVFVLMMVVIGLSLPAYALDLETARSQGLAGEVDNGLLAVPPGSPGDAQ
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCC
GLIGTINNQRRAEYAKVAAENNLSLDVVGGMMFQKIYTRLPAGTWVQVQGKWTKKAR
CEEECCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
TFSAIKKPLFSVFVLMMVVIGLSLPAYALDLETARSQGLAGEVDNGLLAVPPGSPGDAQ
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCC
GLIGTINNQRRAEYAKVAAENNLSLDVVGGMMFQKIYTRLPAGTWVQVQGKWTKKAR
CEEECCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA