Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
---|---|
Accession | NC_008639 |
Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357352
Identifier: 119357352
GI number: 119357352
Start: 1761878
End: 1762351
Strand: Direct
Name: 119357352
Synonym: Cpha266_1550
Alternate gene names: NA
Gene position: 1761878-1762351 (Clockwise)
Preceding gene: 119357345
Following gene: 119357353
Centisome position: 56.22
GC content: 37.97
Gene sequence:
>474_bases ATGAAAAAACTCTCCCCTTTTTTTTTGTTTTTATTTTTCTTCACCGCAAGAATACTTCACACGACGGAAAACATCTCTCC TGTTCTTGACAAATCTGATCAAAAAGGATCTATCATTGTTCATATTCAGAATCTGAAAAAACCTGAAGGATTGCTTGGCG TTGCACTCTTCTCCTCAGAACAGGGATTTCCCGGCAAATCGGAGAGAGCTTTTGCAAAAAAAGGAGTAAAAATTACTGCC ACGTCACAGGATGTAACATTTGACAATATTCCCTATGGAACGTACGCCATAAGTGTTTTCCATGATGAAAACAGTAATGA AAAACTGGATACGATGATTTTCGGGATTCCAAAAGAGGGCGTCGGGGTTTCCAATAACCCGAAAATGACAGGCCCGCCTA AATTTAAGCGCAGCAAAATTTTATCCTTGCCTCAAAACCGGAAAGAGATGATAATTTTAATGAAATATATATAA
Upstream 100 bases:
>100_bases CATGACAGAAGACCTGTTAATCTCTTGTGTGAGGTTTAATGATTACCGATATTATAAAAACAGTTGATTACCGAAAACGC TCCCAGCATCATCGAACACC
Downstream 100 bases:
>100_bases TACGACCTGATTCTCTGAACATTTCCAACCATGAACAGTCAATGAAACAAACCCTTGCTCTCTTTACGCTTTCAGCGATC GCCATCGGATCGCTGATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKKLSPFFLFLFFFTARILHTTENISPVLDKSDQKGSIIVHIQNLKKPEGLLGVALFSSEQGFPGKSERAFAKKGVKITA TSQDVTFDNIPYGTYAISVFHDENSNEKLDTMIFGIPKEGVGVSNNPKMTGPPKFKRSKILSLPQNRKEMIILMKYI
Sequences:
>Translated_157_residues MKKLSPFFLFLFFFTARILHTTENISPVLDKSDQKGSIIVHIQNLKKPEGLLGVALFSSEQGFPGKSERAFAKKGVKITA TSQDVTFDNIPYGTYAISVFHDENSNEKLDTMIFGIPKEGVGVSNNPKMTGPPKFKRSKILSLPQNRKEMIILMKYI >Mature_157_residues MKKLSPFFLFLFFFTARILHTTENISPVLDKSDQKGSIIVHIQNLKKPEGLLGVALFSSEQGFPGKSERAFAKKGVKITA TSQDVTFDNIPYGTYAISVFHDENSNEKLDTMIFGIPKEGVGVSNNPKMTGPPKFKRSKILSLPQNRKEMIILMKYI
Specific function: Unknown
COG id: COG4704
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17613; Mature: 17613
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSPFFLFLFFFTARILHTTENISPVLDKSDQKGSIIVHIQNLKKPEGLLGVALFSSE CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCC QGFPGKSERAFAKKGVKITATSQDVTFDNIPYGTYAISVFHDENSNEKLDTMIFGIPKEG CCCCCCCCCHHHHCCEEEEECCCCCEECCCCCCEEEEEEEECCCCCCEEEEEEEECCCCC VGVSNNPKMTGPPKFKRSKILSLPQNRKEMIILMKYI CCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEECC >Mature Secondary Structure MKKLSPFFLFLFFFTARILHTTENISPVLDKSDQKGSIIVHIQNLKKPEGLLGVALFSSE CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCC QGFPGKSERAFAKKGVKITATSQDVTFDNIPYGTYAISVFHDENSNEKLDTMIFGIPKEG CCCCCCCCCHHHHCCEEEEECCCCCEECCCCCCEEEEEEEECCCCCCEEEEEEEECCCCC VGVSNNPKMTGPPKFKRSKILSLPQNRKEMIILMKYI CCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA