Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119357345

Identifier: 119357345

GI number: 119357345

Start: 1753302

End: 1753802

Strand: Direct

Name: 119357345

Synonym: Cpha266_1543

Alternate gene names: NA

Gene position: 1753302-1753802 (Clockwise)

Preceding gene: 119357344

Following gene: 119357352

Centisome position: 55.95

GC content: 46.71

Gene sequence:

>501_bases
ATGGACGAGTTTCGCTGGAATGCATCATTCATGAAAGAGCATCCGCTCAAAACAATCGGGGTTATACTGTTTCTTGTCGG
ACGATATATCTTTGCGGCATTTTTTCTTTACGGGTTCTGGTTCAAGCTCATCAAAGGCTGGTTATGGAGCGATCTGATGA
ACCATTTTTTCACCCTTCGATTTACCGAACTACCCCTCGGCTCCTTTCAGTCGCTCTACCTTGAACACTTCGCCATTCCG
CTTGCAATGCCTATTGCCTGGATAGTGACGATCGGGGAATTGATCATTGGCCTGTCTCTGCTGCTGGGACTCTGTGTCAG
GGCAAATGCAGCTTTTGCTCTTTTTCTTGTTATTAATTTTGCTGCAGGAGGATTTTATAACCTTACCCTGCCGCCATTCA
TGATCTTTTCAATCCTGATGATGCTTCTCCCTTCCGGACAGTGGCTCGGGCTTGACAAAAAGCTGCACCTGCAGCATCCT
GACTCAATCTGGTTCAGGTAA

Upstream 100 bases:

>100_bases
GCTCTGAAAAACAAGTGAACGTTTGCATCTGAAGAGAACGAAAATATTCTCTATATTCGAAAATATTTTTATTCCTTAAC
ACTTTGCGGAAATAAACATT

Downstream 100 bases:

>100_bases
ACAACTCCTGTGCCGCCGAAAAAAGTTCAGCATTTGCCTTCTGAACTTTTTTCGGCGGCCTTTGCCATGAGGGCTTGAAC
TCCGAGATGATAACTGAGTG

Product: DoxX family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MDEFRWNASFMKEHPLKTIGVILFLVGRYIFAAFFLYGFWFKLIKGWLWSDLMNHFFTLRFTELPLGSFQSLYLEHFAIP
LAMPIAWIVTIGELIIGLSLLLGLCVRANAAFALFLVINFAAGGFYNLTLPPFMIFSILMMLLPSGQWLGLDKKLHLQHP
DSIWFR

Sequences:

>Translated_166_residues
MDEFRWNASFMKEHPLKTIGVILFLVGRYIFAAFFLYGFWFKLIKGWLWSDLMNHFFTLRFTELPLGSFQSLYLEHFAIP
LAMPIAWIVTIGELIIGLSLLLGLCVRANAAFALFLVINFAAGGFYNLTLPPFMIFSILMMLLPSGQWLGLDKKLHLQHP
DSIWFR
>Mature_166_residues
MDEFRWNASFMKEHPLKTIGVILFLVGRYIFAAFFLYGFWFKLIKGWLWSDLMNHFFTLRFTELPLGSFQSLYLEHFAIP
LAMPIAWIVTIGELIIGLSLLLGLCVRANAAFALFLVINFAAGGFYNLTLPPFMIFSILMMLLPSGQWLGLDKKLHLQHP
DSIWFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19227; Mature: 19227

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEFRWNASFMKEHPLKTIGVILFLVGRYIFAAFFLYGFWFKLIKGWLWSDLMNHFFTLR
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTELPLGSFQSLYLEHFAIPLAMPIAWIVTIGELIIGLSLLLGLCVRANAAFALFLVINF
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AAGGFYNLTLPPFMIFSILMMLLPSGQWLGLDKKLHLQHPDSIWFR
HCCCEEECCCCHHHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCC
>Mature Secondary Structure
MDEFRWNASFMKEHPLKTIGVILFLVGRYIFAAFFLYGFWFKLIKGWLWSDLMNHFFTLR
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTELPLGSFQSLYLEHFAIPLAMPIAWIVTIGELIIGLSLLLGLCVRANAAFALFLVINF
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AAGGFYNLTLPPFMIFSILMMLLPSGQWLGLDKKLHLQHPDSIWFR
HCCCEEECCCCHHHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA