Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357338
Identifier: 119357338
GI number: 119357338
Start: 1744322
End: 1745026
Strand: Reverse
Name: 119357338
Synonym: Cpha266_1536
Alternate gene names: NA
Gene position: 1745026-1744322 (Counterclockwise)
Preceding gene: 119357339
Following gene: 119357337
Centisome position: 55.68
GC content: 44.96
Gene sequence:
>705_bases ATGTCAGCAGTAGTTCACAATCCTGTAGTGATTATTCCCGGAGTACTTTTCTGGGACTCTCTCTATGAGGTGATGAAAGA TGCTCTTTCCTCCTATATGCCAAGGGCTAAAATAGCCATTGCCCCGGTTAGTTTTATTGATTGGGTCGGGTTTCCTCCCT CTCCTGAGCGCTCAACAAACCGGGTCATGGCAGCTATAGACAAAAGCGTCAGGGAGATGGGGCGAAAATATCCCGGCGAA CCGGTTACCCTTATCGCGCATAGCGGTGGAGGTACCGTTGCCATGATTTATCTGCTCGAAAACTCTTTTCAGGGGGATGT TTATCATCCAGGGGAAAGTGTCGGAAAACTGATTACGCTCGGGACTCCGTTTCATACCCATGAACATTATGCGAAGATAA AAACCGATTTTATTTTTAAGCATATCACGAATGATTTTTTCTCGAGAATTCAGGTCATCACTGTTGCCAGCTCCCAGTAT TCGGGAGACGCCAATGGCAGTGTCGTTGAAAAAATGTGTTATTTATTCTATAAAAACGTCGACACAGACGGCAATGTTGC CGGAGATGGTATTATTCCTGCAAAAAGCTGTGTTTTAGAGGGTGCCACGAATATCGTCATTCCACATGCAGAGCATCTTC CTACACCTCATACCATGTGGTATGGAACAAAAGAAGGGGTTGAACAATGGATTCAATGGTTGTAA
Upstream 100 bases:
>100_bases AAAATGGGCTTAAAGCATACATTACAATCGACGGTTATGCGGTAACGCCTGTCATGTGCGCTGATATACAGAACAGCTTT GTCAACAAGGGAACCCCTTC
Downstream 100 bases:
>100_bases GACATGTGTGGTACAAGCCGGCAGGAGTTATGCTGGTTACCTTGCTGCTCTTATTGTCTGGTTGTGAACGGGATCAGCCG AAACCCGATCCAAAGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSAVVHNPVVIIPGVLFWDSLYEVMKDALSSYMPRAKIAIAPVSFIDWVGFPPSPERSTNRVMAAIDKSVREMGRKYPGE PVTLIAHSGGGTVAMIYLLENSFQGDVYHPGESVGKLITLGTPFHTHEHYAKIKTDFIFKHITNDFFSRIQVITVASSQY SGDANGSVVEKMCYLFYKNVDTDGNVAGDGIIPAKSCVLEGATNIVIPHAEHLPTPHTMWYGTKEGVEQWIQWL
Sequences:
>Translated_234_residues MSAVVHNPVVIIPGVLFWDSLYEVMKDALSSYMPRAKIAIAPVSFIDWVGFPPSPERSTNRVMAAIDKSVREMGRKYPGE PVTLIAHSGGGTVAMIYLLENSFQGDVYHPGESVGKLITLGTPFHTHEHYAKIKTDFIFKHITNDFFSRIQVITVASSQY SGDANGSVVEKMCYLFYKNVDTDGNVAGDGIIPAKSCVLEGATNIVIPHAEHLPTPHTMWYGTKEGVEQWIQWL >Mature_233_residues SAVVHNPVVIIPGVLFWDSLYEVMKDALSSYMPRAKIAIAPVSFIDWVGFPPSPERSTNRVMAAIDKSVREMGRKYPGEP VTLIAHSGGGTVAMIYLLENSFQGDVYHPGESVGKLITLGTPFHTHEHYAKIKTDFIFKHITNDFFSRIQVITVASSQYS GDANGSVVEKMCYLFYKNVDTDGNVAGDGIIPAKSCVLEGATNIVIPHAEHLPTPHTMWYGTKEGVEQWIQWL
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25886; Mature: 25755
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVVHNPVVIIPGVLFWDSLYEVMKDALSSYMPRAKIAIAPVSFIDWVGFPPSPERSTN CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCHHH RVMAAIDKSVREMGRKYPGEPVTLIAHSGGGTVAMIYLLENSFQGDVYHPGESVGKLITL HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHCCEEEE GTPFHTHEHYAKIKTDFIFKHITNDFFSRIQVITVASSQYSGDANGSVVEKMCYLFYKNV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHCC DTDGNVAGDGIIPAKSCVLEGATNIVIPHAEHLPTPHTMWYGTKEGVEQWIQWL CCCCCCCCCCCCCHHHHHHCCCCEEEEECHHHCCCCCEEECCCHHHHHHHHHCC >Mature Secondary Structure SAVVHNPVVIIPGVLFWDSLYEVMKDALSSYMPRAKIAIAPVSFIDWVGFPPSPERSTN CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCHHH RVMAAIDKSVREMGRKYPGEPVTLIAHSGGGTVAMIYLLENSFQGDVYHPGESVGKLITL HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHCCEEEE GTPFHTHEHYAKIKTDFIFKHITNDFFSRIQVITVASSQYSGDANGSVVEKMCYLFYKNV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHCC DTDGNVAGDGIIPAKSCVLEGATNIVIPHAEHLPTPHTMWYGTKEGVEQWIQWL CCCCCCCCCCCCCHHHHHHCCCCEEEEECHHHCCCCCEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA