Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357337
Identifier: 119357337
GI number: 119357337
Start: 1743492
End: 1744340
Strand: Reverse
Name: 119357337
Synonym: Cpha266_1535
Alternate gene names: NA
Gene position: 1744340-1743492 (Counterclockwise)
Preceding gene: 119357338
Following gene: 119357336
Centisome position: 55.66
GC content: 43.82
Gene sequence:
>849_bases ATGGATTCAATGGTTGTAAGACATGTGTGGTACAAGCCGGCAGGAGTTATGCTGGTTACCTTGCTGCTCTTATTGTCTGG TTGTGAACGGGATCAGCCGAAACCCGATCCAAAGCAGCAGCATATCGACTCAATGATGGCTATTCTTACACAGGTTCAGC AAAATCTCGGTAGAATTCAGCAGAAAGAAGCTGTTGTCGAAAAGCTCTCGTCCGATATTGAAAAGCAGGATCAGAAGGAT GTTCAACAGATCGGCAAGGATATTTATTCAAGCATCAGGTTTATCGATTCAACGCTTTCGGCAAGCAAAACCCTTATTGA AAAGCTTGAAGCGGAAAACAAATCTTCACAATACCACGTAGCCTCTGTTGATCGTCTCGTTAACGAGATGAAAACCACCA TCAATGATAAAGACGCAGAGGTAGGACGACTCAAGGGGCAGGTTCAGAAGCTGAGTAAAGAGGTTTCCGAGTTGCAGACA ACGGTTGATGTACTCGATGATTTTATTCAGGAGCAAAGCGAGCAGCTTTATACGGCCTACTATATAGCGGGCTCTTTCAA TGAGCTGGTTGAGAAGGGTATTCTTGTAAGGATCAATCCGCTTGAAAGGTTTTTTGGAAACGAGTATCGGCTTGCACAGG ATTTTGATGTCAAGCAGTTCAGAAAGATCGATATTTCGGAAACAAGAGATCTCTTTTTTAACAAGCCCCTTAAAAATCTC AAAATTGTTACGCCCCACACGAGAGGCTCCTATGAGCTGGCGGGAGGAAACACCTCATCGATGCTCCTGATTCGCAATGA AAACGAGTTCTGGAAGAAATCCCGTTGTCTTGTTCTTGTTATCGAATAA
Upstream 100 bases:
>100_bases GCTGTGTTTTAGAGGGTGCCACGAATATCGTCATTCCACATGCAGAGCATCTTCCTACACCTCATACCATGTGGTATGGA ACAAAAGAAGGGGTTGAACA
Downstream 100 bases:
>100_bases GGAGTTTTCGGTAATTGCCTTGTTTTTCGATTTGCAGGGAGCAGTTTCTCTGAGGATGTATGGTAGGCAGTTTTTTTTAT TGTCGCGAGCGGTTTGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MDSMVVRHVWYKPAGVMLVTLLLLLSGCERDQPKPDPKQQHIDSMMAILTQVQQNLGRIQQKEAVVEKLSSDIEKQDQKD VQQIGKDIYSSIRFIDSTLSASKTLIEKLEAENKSSQYHVASVDRLVNEMKTTINDKDAEVGRLKGQVQKLSKEVSELQT TVDVLDDFIQEQSEQLYTAYYIAGSFNELVEKGILVRINPLERFFGNEYRLAQDFDVKQFRKIDISETRDLFFNKPLKNL KIVTPHTRGSYELAGGNTSSMLLIRNENEFWKKSRCLVLVIE
Sequences:
>Translated_282_residues MDSMVVRHVWYKPAGVMLVTLLLLLSGCERDQPKPDPKQQHIDSMMAILTQVQQNLGRIQQKEAVVEKLSSDIEKQDQKD VQQIGKDIYSSIRFIDSTLSASKTLIEKLEAENKSSQYHVASVDRLVNEMKTTINDKDAEVGRLKGQVQKLSKEVSELQT TVDVLDDFIQEQSEQLYTAYYIAGSFNELVEKGILVRINPLERFFGNEYRLAQDFDVKQFRKIDISETRDLFFNKPLKNL KIVTPHTRGSYELAGGNTSSMLLIRNENEFWKKSRCLVLVIE >Mature_282_residues MDSMVVRHVWYKPAGVMLVTLLLLLSGCERDQPKPDPKQQHIDSMMAILTQVQQNLGRIQQKEAVVEKLSSDIEKQDQKD VQQIGKDIYSSIRFIDSTLSASKTLIEKLEAENKSSQYHVASVDRLVNEMKTTINDKDAEVGRLKGQVQKLSKEVSELQT TVDVLDDFIQEQSEQLYTAYYIAGSFNELVEKGILVRINPLERFFGNEYRLAQDFDVKQFRKIDISETRDLFFNKPLKNL KIVTPHTRGSYELAGGNTSSMLLIRNENEFWKKSRCLVLVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32393; Mature: 32393
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSMVVRHVWYKPAGVMLVTLLLLLSGCERDQPKPDPKQQHIDSMMAILTQVQQNLGRIQ CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QKEAVVEKLSSDIEKQDQKDVQQIGKDIYSSIRFIDSTLSASKTLIEKLEAENKSSQYHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH ASVDRLVNEMKTTINDKDAEVGRLKGQVQKLSKEVSELQTTVDVLDDFIQEQSEQLYTAY HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIAGSFNELVEKGILVRINPLERFFGNEYRLAQDFDVKQFRKIDISETRDLFFNKPLKNL EECCCHHHHHHCCCEEEECHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCC KIVTPHTRGSYELAGGNTSSMLLIRNENEFWKKSRCLVLVIE EEECCCCCCCEEECCCCCCEEEEEECCCHHHHCCCEEEEEEC >Mature Secondary Structure MDSMVVRHVWYKPAGVMLVTLLLLLSGCERDQPKPDPKQQHIDSMMAILTQVQQNLGRIQ CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QKEAVVEKLSSDIEKQDQKDVQQIGKDIYSSIRFIDSTLSASKTLIEKLEAENKSSQYHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH ASVDRLVNEMKTTINDKDAEVGRLKGQVQKLSKEVSELQTTVDVLDDFIQEQSEQLYTAY HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIAGSFNELVEKGILVRINPLERFFGNEYRLAQDFDVKQFRKIDISETRDLFFNKPLKNL EECCCHHHHHHCCCEEEECHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCC KIVTPHTRGSYELAGGNTSSMLLIRNENEFWKKSRCLVLVIE EEECCCCCCCEEECCCCCCEEEEEECCCHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA