Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is thiE
Identifier: 119357334
GI number: 119357334
Start: 1740426
End: 1741046
Strand: Direct
Name: thiE
Synonym: Cpha266_1532
Alternate gene names: 119357334
Gene position: 1740426-1741046 (Clockwise)
Preceding gene: 119357333
Following gene: 119357335
Centisome position: 55.54
GC content: 49.11
Gene sequence:
>621_bases ATGATACCTGCCAAACCATTTCTCTGTGTTATCACCGATGAGCAATGCTCATCACCCGTCGATCTGGCCTTGATGGCACT CGAAGGCGGGGCTGAAATGATACAGCTTCGCCACAAATCAGCCTCAGGAAAACAACTTTTTCAATGGGCTCTGGATATTC AGCGGCTTTGTCGGATCCATCATGCTCAATTTATTGTCAATGACCGGGTTGATATCGCTCTTGCCATGAATGCGGACGGA GTACATCTGGGTCAGCAGGATCTTCAGCCCGGAGAGGCAAGAAAACTTCTTGGCACCGACAAGATAATAGGTGTTTCCAC CTCATCTCTTACGGAGGCTTTAAATGCGGAGCGGGCTGGCGCCGACTACATTGGATTCGGCCATATTTTTCAAACCGGAT CAAAAAACAAACTATCCGCGCCCCTTGGATCGGCGGCGATCAGTGCTGTCGTTCAACGGATTTCCATTCCTCTTGTTGCC ATTGGAGGGATCAATAAGATGAATATGATGGAAACAATAGCAGCAGGAGCATCCGGAATCGCAATGATTGCCGCAATCAG CAGAACAGCCGACCCTGAAGGGGCAACCCGTGCAATTACAGAACTTCTGAAAGGTCATTGA
Upstream 100 bases:
>100_bases GCCTTGATTCCGGCGCATATGGAGTTGCCGCTCTCTCGCTGTTTATGGATACCACTCGCCTGGTCAATACGCTTGATAAA TTTCATCGACTTCTGTATTC
Downstream 100 bases:
>100_bases AACATGAAGAATAACTATACCACCATTCTCACCATCGCGGGTTCCGATGGCAGCGGAGGAGCGGGAATACAAGCTGATCT GAAAACGTTTGCTGCGCTTG
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MIPAKPFLCVITDEQCSSPVDLALMALEGGAEMIQLRHKSASGKQLFQWALDIQRLCRIHHAQFIVNDRVDIALAMNADG VHLGQQDLQPGEARKLLGTDKIIGVSTSSLTEALNAERAGADYIGFGHIFQTGSKNKLSAPLGSAAISAVVQRISIPLVA IGGINKMNMMETIAAGASGIAMIAAISRTADPEGATRAITELLKGH
Sequences:
>Translated_206_residues MIPAKPFLCVITDEQCSSPVDLALMALEGGAEMIQLRHKSASGKQLFQWALDIQRLCRIHHAQFIVNDRVDIALAMNADG VHLGQQDLQPGEARKLLGTDKIIGVSTSSLTEALNAERAGADYIGFGHIFQTGSKNKLSAPLGSAAISAVVQRISIPLVA IGGINKMNMMETIAAGASGIAMIAAISRTADPEGATRAITELLKGH >Mature_206_residues MIPAKPFLCVITDEQCSSPVDLALMALEGGAEMIQLRHKSASGKQLFQWALDIQRLCRIHHAQFIVNDRVDIALAMNADG VHLGQQDLQPGEARKLLGTDKIIGVSTSSLTEALNAERAGADYIGFGHIFQTGSKNKLSAPLGSAAISAVVQRISIPLVA IGGINKMNMMETIAAGASGIAMIAAISRTADPEGATRAITELLKGH
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family
Homologues:
Organism=Escherichia coli, GI1790426, Length=177, Percent_Identity=34.4632768361582, Blast_Score=88, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6325042, Length=195, Percent_Identity=31.2820512820513, Blast_Score=102, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIE_CHLPD (A1BGM7)
Other databases:
- EMBL: CP000492 - RefSeq: YP_911978.1 - ProteinModelPortal: A1BGM7 - SMR: A1BGM7 - STRING: A1BGM7 - GeneID: 4569582 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_1532 - NMPDR: fig|290317.7.peg.1614 - eggNOG: COG0352 - HOGENOM: HBG754477 - OMA: GARCCAL - HAMAP: MF_00097 - InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00693
Pfam domain/function: PF02581 TMP-TENI; SSF51391 TMP_synthase
EC number: =2.5.1.3
Molecular weight: Translated: 21738; Mature: 21738
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPAKPFLCVITDEQCSSPVDLALMALEGGAEMIQLRHKSASGKQLFQWALDIQRLCRIH CCCCCCEEEEEECHHCCCCHHEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH HAQFIVNDRVDIALAMNADGVHLGQQDLQPGEARKLLGTDKIIGVSTSSLTEALNAERAG HHHHEECCCEEEEEEECCCCCCCCHHHCCCCHHHHHHCCCCEEECCHHHHHHHHHHHHCC ADYIGFGHIFQTGSKNKLSAPLGSAAISAVVQRISIPLVAIGGINKMNMMETIAAGASGI CCCEECHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCHH AMIAAISRTADPEGATRAITELLKGH HHHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MIPAKPFLCVITDEQCSSPVDLALMALEGGAEMIQLRHKSASGKQLFQWALDIQRLCRIH CCCCCCEEEEEECHHCCCCHHEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH HAQFIVNDRVDIALAMNADGVHLGQQDLQPGEARKLLGTDKIIGVSTSSLTEALNAERAG HHHHEECCCEEEEEEECCCCCCCCHHHCCCCHHHHHHCCCCEEECCHHHHHHHHHHHHCC ADYIGFGHIFQTGSKNKLSAPLGSAAISAVVQRISIPLVAIGGINKMNMMETIAAGASGI CCCEECHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCHH AMIAAISRTADPEGATRAITELLKGH HHHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA