Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is thiE [C]
Identifier: 119357333
GI number: 119357333
Start: 1739791
End: 1740429
Strand: Direct
Name: thiE [C]
Synonym: Cpha266_1531
Alternate gene names: 119357333
Gene position: 1739791-1740429 (Clockwise)
Preceding gene: 119357328
Following gene: 119357334
Centisome position: 55.52
GC content: 48.04
Gene sequence:
>639_bases ATGACTCCCCCATCACCTCAACTTCCTCGCCTTTATCTGGTAAGCAGCGGCTTCAATTCCCGGGATTCTTATACTCAGCT TGAAAATCAGGTTACCTGTTTTTCAAGTTCTTGCCCCTGCATTGTCCAAATACGAGAAAAGATGCTTGATGCCAAAACCC TTTTTGAACTCTCCTGCTCCATTGCACCCGCCATCATTGCGGCAGGATCGATGGTTGTCATCAACGAGCGGGTTGATATT GCCCTTGCTGCGGCACTCAATGGGGTACATTTTCCTGAAAACTCCTCTCCTCCAGAGAGATTCAGAGCGATGACAAAAGG AAAAATTCTCGGTCAAAGCACTCATTCGCTTAAGACTGCTCGTATAAGCCAGCAGGCGGGGGTTGATTATATCCTGTTCG GGCCAGTATTCGATACCCCCTCCAAAAGAGGTTTCGGGCCGCCTCAGGGTTTACTTAATCTCGCTGCTGTATGCGAGGCA ACATCATTGCCGGTCTATGCAATCGGAGGAGTAACTCCTGAAAATGCTTCTTTATGCCTTGATTCCGGCGCATATGGAGT TGCCGCTCTCTCGCTGTTTATGGATACCACTCGCCTGGTCAATACGCTTGATAAATTTCATCGACTTCTGTATTCATGA
Upstream 100 bases:
>100_bases AACACCCATTTTACGCCGGAACGAGAAATTTCAGCTCCGTAAAAAAACGATCCGATTGCTGCACCCAGGCTAACAGAGAT ACCCATAAACGATATCGCTC
Downstream 100 bases:
>100_bases TACCTGCCAAACCATTTCTCTGTGTTATCACCGATGAGCAATGCTCATCACCCGTCGATCTGGCCTTGATGGCACTCGAA GGCGGGGCTGAAATGATACA
Product: thiamine monophosphate synthase
Products: diphosphate; thiamine monophosphate
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTPPSPQLPRLYLVSSGFNSRDSYTQLENQVTCFSSSCPCIVQIREKMLDAKTLFELSCSIAPAIIAAGSMVVINERVDI ALAAALNGVHFPENSSPPERFRAMTKGKILGQSTHSLKTARISQQAGVDYILFGPVFDTPSKRGFGPPQGLLNLAAVCEA TSLPVYAIGGVTPENASLCLDSGAYGVAALSLFMDTTRLVNTLDKFHRLLYS
Sequences:
>Translated_212_residues MTPPSPQLPRLYLVSSGFNSRDSYTQLENQVTCFSSSCPCIVQIREKMLDAKTLFELSCSIAPAIIAAGSMVVINERVDI ALAAALNGVHFPENSSPPERFRAMTKGKILGQSTHSLKTARISQQAGVDYILFGPVFDTPSKRGFGPPQGLLNLAAVCEA TSLPVYAIGGVTPENASLCLDSGAYGVAALSLFMDTTRLVNTLDKFHRLLYS >Mature_211_residues TPPSPQLPRLYLVSSGFNSRDSYTQLENQVTCFSSSCPCIVQIREKMLDAKTLFELSCSIAPAIIAAGSMVVINERVDIA LAAALNGVHFPENSSPPERFRAMTKGKILGQSTHSLKTARISQQAGVDYILFGPVFDTPSKRGFGPPQGLLNLAAVCEAT SLPVYAIGGVTPENASLCLDSGAYGVAALSLFMDTTRLVNTLDKFHRLLYS
Specific function: Condenses 4-Methyl-5-(Beta-Hydroxyethyl)-Thiazole Monophosphate (Thz-P) And 4-Amino-5-Hydroxymethyl Pyrimidine Pyrophosphate (Hmp-Pp) To Form Thiamine Monophosphate (TMP). [C]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: 2.5.1.3
Molecular weight: Translated: 22761; Mature: 22630
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPSPQLPRLYLVSSGFNSRDSYTQLENQVTCFSSSCPCIVQIREKMLDAKTLFELSCS CCCCCCCCCEEEEEECCCCCCHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH IAPAIIAAGSMVVINERVDIALAAALNGVHFPENSSPPERFRAMTKGKILGQSTHSLKTA HHHHHHHCCCEEEEECCCCEEEEHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH RISQQAGVDYILFGPVFDTPSKRGFGPPQGLLNLAAVCEATSLPVYAIGGVTPENASLCL HHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEE DSGAYGVAALSLFMDTTRLVNTLDKFHRLLYS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPPSPQLPRLYLVSSGFNSRDSYTQLENQVTCFSSSCPCIVQIREKMLDAKTLFELSCS CCCCCCCCEEEEEECCCCCCHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH IAPAIIAAGSMVVINERVDIALAAALNGVHFPENSSPPERFRAMTKGKILGQSTHSLKTA HHHHHHHCCCEEEEECCCCEEEEHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH RISQQAGVDYILFGPVFDTPSKRGFGPPQGLLNLAAVCEATSLPVYAIGGVTPENASLCL HHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEE DSGAYGVAALSLFMDTTRLVNTLDKFHRLLYS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Ca2+; Co2+; Mg2+; Mn2+; Zn2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.00085 {hydroxymethylpyrimidine} 0.0004 {thiazole} [C]
Substrates: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate; 4-Methyl-5-(2-phosphono-oxyethyl)-thiazole
Specific reaction: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-methyl-5-(2-phosphono-oxyethyl)thiazole = diphosphate + thiamine monophosphate
General reaction: Hydroxymethylpyrimidine group transfer [C]
Inhibitor: Acetyl phosphate substrates; ADP; ATP; CTP; Diphosphate; GTP; Phosphocreatine; Phosphoenolpyruvate; UTP [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]