Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is hldE [H]
Identifier: 119357328
GI number: 119357328
Start: 1734105
End: 1735088
Strand: Direct
Name: hldE [H]
Synonym: Cpha266_1526
Alternate gene names: 119357328
Gene position: 1734105-1735088 (Clockwise)
Preceding gene: 119357321
Following gene: 119357333
Centisome position: 55.33
GC content: 46.95
Gene sequence:
>984_bases ATGTCAGCACCCTCCATAAAACACATCCTTGATTCGTTCAAGAAGCAGCGCATTGCCGTTATAGGCGACATCATGCTCGA TAAATATATCTTCGGGCATGTTTCAAGAATTTCTCCGGAGTATCCGGTTCCTGTCGTTGAGGTAACGCATGAGGATCATC GGCTCGGCGGAGCTGCAAATGTCGCTCTCAATACGCTTTCGCTTGGCGCTGAAACCATCCTGATCGGGGTTACCGGTGCT GATGCCAACAGGGATATTCTTGCAGACCTTTGCAGAAATCTGAACCTTTCCGTTGACTGTCTCGTTGCGGACGCATCAAG ACCCACAACAAGCAAAACAAGAATTCTCTCCCAAAGCCATCACATAACCAGAGTGGATTATGAAAGCAAGGAGTCGGTTG ACCAGCATATTGAAACCGCCATTCTTGAGCGTTTTGAACATATTGCCGACAGCATTGATGCCGTGATTCTCGAAGATTAC AACAAGGGACTTCTTACGGAAAACCTTGTTCAAAACATTATTAAAATAGCAGAAACAAACAACACCCCCGTTCTTGTTGA CCCTAAACTTAAAGGGTTCTTTTCATATCGAAACTGCAGTGTTTTCAAGCCAAACCTTTCTGAAATGGCCTCCTCACTGG GTATTGTCATTCATAATGATGACAGGGAAATTGAGAAGGCATGCGTTTTGCTCCGCGAAAAACTCAATGCCGAGGCGATT GTCGTAACACGAAGTGAAAAAGGAATGACCATTTACAACGGGAAATTCACTCATATTCCGGCTACATCCCTTGAAGTATC CGATGTATCGGGTGCCGGAGACACGGTAATCAGCGTGCTCGCGCTGGGTGCCGCTTCCGGTCTCGATATTGAGACCAGCG CAGCAATCGCCAATCTTGCTGCCGGATCAGTCTGCCAGGAGGTTGGCGCCGTTCCTGTAAAACAGGATAAACTGTTCAGG GCATGTCAGGAATATCTTCGATAA
Upstream 100 bases:
>100_bases TCTTGTGATCTGAGTGCATATCAGGTTTTTATCCACTTTTTTCTTTTTTTGTCGAAAAGAAATCTTCTCCGTGCAATAAT ATCGTCACCAGAAAATCAGT
Downstream 100 bases:
>100_bases TGCAGAGGTGGTTGTCAATCTCATCAGGATATGGCGGATTATAGGAACAGTCGGCAATCAGGGATCTCATATTCTGCAAC GAATAAAAGGGAACCTCGAA
Product: rfaE bifunctional protein
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSAPSIKHILDSFKKQRIAVIGDIMLDKYIFGHVSRISPEYPVPVVEVTHEDHRLGGAANVALNTLSLGAETILIGVTGA DANRDILADLCRNLNLSVDCLVADASRPTTSKTRILSQSHHITRVDYESKESVDQHIETAILERFEHIADSIDAVILEDY NKGLLTENLVQNIIKIAETNNTPVLVDPKLKGFFSYRNCSVFKPNLSEMASSLGIVIHNDDREIEKACVLLREKLNAEAI VVTRSEKGMTIYNGKFTHIPATSLEVSDVSGAGDTVISVLALGAASGLDIETSAAIANLAAGSVCQEVGAVPVKQDKLFR ACQEYLR
Sequences:
>Translated_327_residues MSAPSIKHILDSFKKQRIAVIGDIMLDKYIFGHVSRISPEYPVPVVEVTHEDHRLGGAANVALNTLSLGAETILIGVTGA DANRDILADLCRNLNLSVDCLVADASRPTTSKTRILSQSHHITRVDYESKESVDQHIETAILERFEHIADSIDAVILEDY NKGLLTENLVQNIIKIAETNNTPVLVDPKLKGFFSYRNCSVFKPNLSEMASSLGIVIHNDDREIEKACVLLREKLNAEAI VVTRSEKGMTIYNGKFTHIPATSLEVSDVSGAGDTVISVLALGAASGLDIETSAAIANLAAGSVCQEVGAVPVKQDKLFR ACQEYLR >Mature_326_residues SAPSIKHILDSFKKQRIAVIGDIMLDKYIFGHVSRISPEYPVPVVEVTHEDHRLGGAANVALNTLSLGAETILIGVTGAD ANRDILADLCRNLNLSVDCLVADASRPTTSKTRILSQSHHITRVDYESKESVDQHIETAILERFEHIADSIDAVILEDYN KGLLTENLVQNIIKIAETNNTPVLVDPKLKGFFSYRNCSVFKPNLSEMASSLGIVIHNDDREIEKACVLLREKLNAEAIV VTRSEKGMTIYNGKFTHIPATSLEVSDVSGAGDTVISVLALGAASGLDIETSAAIANLAAGSVCQEVGAVPVKQDKLFRA CQEYLR
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789432, Length=307, Percent_Identity=40.7166123778502, Blast_Score=206, Evalue=1e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 35505; Mature: 35374
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPSIKHILDSFKKQRIAVIGDIMLDKYIFGHVSRISPEYPVPVVEVTHEDHRLGGAAN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHCCCHHH VALNTLSLGAETILIGVTGADANRDILADLCRNLNLSVDCLVADASRPTTSKTRILSQSH HHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCC HITRVDYESKESVDQHIETAILERFEHIADSIDAVILEDYNKGLLTENLVQNIIKIAETN CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHCCC NTPVLVDPKLKGFFSYRNCSVFKPNLSEMASSLGIVIHNDDREIEKACVLLREKLNAEAI CCCEEECCCCCCEEEECCCEEECCCHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCEE VVTRSEKGMTIYNGKFTHIPATSLEVSDVSGAGDTVISVLALGAASGLDIETSAAIANLA EEEECCCCEEEECCEEEECCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH AGSVCQEVGAVPVKQDKLFRACQEYLR HHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SAPSIKHILDSFKKQRIAVIGDIMLDKYIFGHVSRISPEYPVPVVEVTHEDHRLGGAAN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHCCCHHH VALNTLSLGAETILIGVTGADANRDILADLCRNLNLSVDCLVADASRPTTSKTRILSQSH HHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCC HITRVDYESKESVDQHIETAILERFEHIADSIDAVILEDYNKGLLTENLVQNIIKIAETN CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHCCC NTPVLVDPKLKGFFSYRNCSVFKPNLSEMASSLGIVIHNDDREIEKACVLLREKLNAEAI CCCEEECCCCCCEEEECCCEEECCCHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCEE VVTRSEKGMTIYNGKFTHIPATSLEVSDVSGAGDTVISVLALGAASGLDIETSAAIANLA EEEECCCCEEEECCEEEECCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH AGSVCQEVGAVPVKQDKLFRACQEYLR HHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA