Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
---|---|
Accession | NC_008639 |
Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is yfhL [C]
Identifier: 119357225
GI number: 119357225
Start: 1611793
End: 1611981
Strand: Direct
Name: yfhL [C]
Synonym: Cpha266_1416
Alternate gene names: 119357225
Gene position: 1611793-1611981 (Clockwise)
Preceding gene: 119357224
Following gene: 119357226
Centisome position: 51.43
GC content: 52.91
Gene sequence:
>189_bases ATGGCACATCGTATCTCTGAAGAATGCACCTATTGCGCAGCCTGTGAGCCTGAATGCCCGGTCAGCGCAATTTCGGCTGG TGACGAAATCTATATCATCGACGAAAACGTCTGTACCGACTGTGTCGGCTACCATGACGAAGCCGCCTGCGTGCTGGTTT GCCCGGTTGACTGTATTTCCTTGGTCTGA
Upstream 100 bases:
>100_bases AACACGCTGTTCTCATACGGATTGTAAAAATTGTTCCGGTTTCTCCTGACCGCTCTTTCTGCGGTCACTTTTTTTTCCAA TTAAAACCAACAATAGCATT
Downstream 100 bases:
>100_bases AACCGGCAAAACGCATCAATCTTCAATCTGAGGATATCTCCCTGCGTAAGATTCTCTCTTATGCAGGGCTTTTTTATTTA TCCTCAATAATTCATGACGC
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: Ferredoxin II; FdII [H]
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MAHRISEECTYCAACEPECPVSAISAGDEIYIIDENVCTDCVGYHDEAACVLVCPVDCISLV
Sequences:
>Translated_62_residues MAHRISEECTYCAACEPECPVSAISAGDEIYIIDENVCTDCVGYHDEAACVLVCPVDCISLV >Mature_61_residues AHRISEECTYCAACEPECPVSAISAGDEIYIIDENVCTDCVGYHDEAACVLVCPVDCISLV
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788914, Length=56, Percent_Identity=50, Blast_Score=60, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6644; Mature: 6512
Theoretical pI: Translated: 3.62; Mature: 3.62
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
14.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 16.1 %Cys+Met (Translated Protein) 14.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 14.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHRISEECTYCAACEPECPVSAISAGDEIYIIDENVCTDCVGYHDEAACVLVCPVDCIS CCCCCCCCCCEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCHHHHH LV CC >Mature Secondary Structure AHRISEECTYCAACEPECPVSAISAGDEIYIIDENVCTDCVGYHDEAACVLVCPVDCIS CCCCCCCCCEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCHHHHH LV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]