Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is yfhL [C]
Identifier: 119357226
GI number: 119357226
Start: 1612909
End: 1613097
Strand: Direct
Name: yfhL [C]
Synonym: Cpha266_1418
Alternate gene names: 119357226
Gene position: 1612909-1613097 (Clockwise)
Preceding gene: 119357225
Following gene: 119357232
Centisome position: 51.47
GC content: 54.5
Gene sequence:
>189_bases ATGGCTCTGTACATTACTGAAGAGTGCACATACTGCGGCGCATGTGAACCAGAATGCCCGGTCACAGCAATCGCAGCAGG CGACGATATCTATGTCATTGATGCAGGCACCTGCACCGAGTGTGTCGGCTATGCTGATGCTCCGGCATGTGTTGCAGTCT GCCCGGCAGAATGCATCGTTCAGGGATGA
Upstream 100 bases:
>100_bases CGTTTTTTTGACAGCTCAAAATTTATTTTATATTTACGGAAATTCACCTGAATCGTTCTTTCTGTCTTTTTCTTTACAAC CCTTAAGCAAGGAAATCAAT
Downstream 100 bases:
>100_bases GCTCCTTGAGTTCACCGAATAAAAAAACGGCCTGATCTCTCAGGCCGTTTTTTTTATATCAATGGCAGCATGGATTCCTC TCAATCAATCAACTCACTCC
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: Ferredoxin I; FdI [H]
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MALYITEECTYCGACEPECPVTAIAAGDDIYVIDAGTCTECVGYADAPACVAVCPAECIVQG
Sequences:
>Translated_62_residues MALYITEECTYCGACEPECPVTAIAAGDDIYVIDAGTCTECVGYADAPACVAVCPAECIVQG >Mature_61_residues ALYITEECTYCGACEPECPVTAIAAGDDIYVIDAGTCTECVGYADAPACVAVCPAECIVQG
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788914, Length=55, Percent_Identity=56.3636363636364, Blast_Score=69, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: NA
Molecular weight: Translated: 6328; Mature: 6197
Theoretical pI: Translated: 2.96; Mature: 2.96
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
14.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 16.1 %Cys+Met (Translated Protein) 14.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 14.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALYITEECTYCGACEPECPVTAIAAGDDIYVIDAGTCTECVGYADAPACVAVCPAECIV CEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCHHHCCCCCCCCEEEECCHHEEE QG CC >Mature Secondary Structure ALYITEECTYCGACEPECPVTAIAAGDDIYVIDAGTCTECVGYADAPACVAVCPAECIV EEEECCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCHHHCCCCCCCCEEEECCHHEEE QG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]