Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is phoH [H]
Identifier: 119357224
GI number: 119357224
Start: 1610699
End: 1611658
Strand: Direct
Name: phoH [H]
Synonym: Cpha266_1415
Alternate gene names: 119357224
Gene position: 1610699-1611658 (Clockwise)
Preceding gene: 119357223
Following gene: 119357225
Centisome position: 51.4
GC content: 49.58
Gene sequence:
>960_bases TTGTCCATAGAAAAAACGATTGAGATACAAGGAAGAGAACCCGTCCTTCTCTTTGGCCCCTACGACTCCTACCTGAAAAA AATCAGAGAAGCTTTTCCTGATGTGCAGATCAATGCAAGAGGAACGACAATCAACATAAAAGGAGGAAGTAACGATGTTG CCGGCGTAGAACAGATTTTCAACGAACTGGTGTTTCTCGCTGACAGACATGGAGAAATTCTCCCGACAGACCTCAGCGCA CTCATTTCGCTTGCGCTCTCCCCCGCTCCACGCCACAAAGCTTCGACGGTTGACGATCAGGACATTATTGTAGCGACTGC CGACTATACCGTCAGAGCGAAAACAAATGGGCAACGCCGTATGGTAGCGGAAGCAAAGACCAACGACATCCTGTTTGCCA TCGGGCCTGCCGGCACGGGAAAAACCTATACCGCCGTTGCCATCGCCGTGGCAGCATGGAAGGCAAAAAGCGTCAAGAGA ATCGTGCTTGCCCGTCCGGCGGTTGAAGCAGGCGAAAGCCTCGGATTTCTCCCCGGAGATCTTGCCCAGAAAATAGACCC CTACCTGCGTCCGCTTTACGATGCGCTGCAGGATATGCTGACCGCGGAAAAGCTCAAATCACTCACCGAGAAGCGCATCA TCGAAATCGTTCCGCTCGCCTACATGAGAGGCCGAACACTGAACAACGCATTCATTATTCTCGATGAAGCCCAAAACGCC TCCAGCAAACAGATGAAAATGTGTCTTACCCGTCTGGGAGTTAACTCAAAAGCCATCATCACCGGCGATGTTACGCAAAT CGATCTGCCAAGCGAACTCGAGTCGGGCCTTATCAACTCACAGCACATCCTTAAAGATATCAAAGGGATAAGCTTTGTTC ATCTTGACAAATCCGACGTTGTACGTCACAAACTGGTCAGGGATATCATTAATGCCTATGAAATACATGAACAGAAATGA
Upstream 100 bases:
>100_bases TCGAAGATGGCATAAGGGATTATGTACAAAACTGGCTCGTAACCCTGACCCCACATTTTGATATCGGCCATAACACCCAC AATCATTAACCCCTACGCAT
Downstream 100 bases:
>100_bases GAGCCAATGTTCCCTTTCCGGAACTTTGTTCAGGAACACGCTGTTCTCATACGGATTGTAAAAATTGTTCCGGTTTCTCC TGACCGCTCTTTCTGCGGTC
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MSIEKTIEIQGREPVLLFGPYDSYLKKIREAFPDVQINARGTTINIKGGSNDVAGVEQIFNELVFLADRHGEILPTDLSA LISLALSPAPRHKASTVDDQDIIVATADYTVRAKTNGQRRMVAEAKTNDILFAIGPAGTGKTYTAVAIAVAAWKAKSVKR IVLARPAVEAGESLGFLPGDLAQKIDPYLRPLYDALQDMLTAEKLKSLTEKRIIEIVPLAYMRGRTLNNAFIILDEAQNA SSKQMKMCLTRLGVNSKAIITGDVTQIDLPSELESGLINSQHILKDIKGISFVHLDKSDVVRHKLVRDIINAYEIHEQK
Sequences:
>Translated_319_residues MSIEKTIEIQGREPVLLFGPYDSYLKKIREAFPDVQINARGTTINIKGGSNDVAGVEQIFNELVFLADRHGEILPTDLSA LISLALSPAPRHKASTVDDQDIIVATADYTVRAKTNGQRRMVAEAKTNDILFAIGPAGTGKTYTAVAIAVAAWKAKSVKR IVLARPAVEAGESLGFLPGDLAQKIDPYLRPLYDALQDMLTAEKLKSLTEKRIIEIVPLAYMRGRTLNNAFIILDEAQNA SSKQMKMCLTRLGVNSKAIITGDVTQIDLPSELESGLINSQHILKDIKGISFVHLDKSDVVRHKLVRDIINAYEIHEQK >Mature_318_residues SIEKTIEIQGREPVLLFGPYDSYLKKIREAFPDVQINARGTTINIKGGSNDVAGVEQIFNELVFLADRHGEILPTDLSAL ISLALSPAPRHKASTVDDQDIIVATADYTVRAKTNGQRRMVAEAKTNDILFAIGPAGTGKTYTAVAIAVAAWKAKSVKRI VLARPAVEAGESLGFLPGDLAQKIDPYLRPLYDALQDMLTAEKLKSLTEKRIIEIVPLAYMRGRTLNNAFIILDEAQNAS SKQMKMCLTRLGVNSKAIITGDVTQIDLPSELESGLINSQHILKDIKGISFVHLDKSDVVRHKLVRDIINAYEIHEQK
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=307, Percent_Identity=47.8827361563518, Blast_Score=254, Evalue=4e-69, Organism=Escherichia coli, GI1787257, Length=203, Percent_Identity=43.3497536945813, Blast_Score=173, Evalue=1e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 35055; Mature: 34924
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEKTIEIQGREPVLLFGPYDSYLKKIREAFPDVQINARGTTINIKGGSNDVAGVEQIF CCCCCEEEECCCCCEEEECCHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCHHHHHHHH NELVFLADRHGEILPTDLSALISLALSPAPRHKASTVDDQDIIVATADYTVRAKTNGQRR HHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCEE MVAEAKTNDILFAIGPAGTGKTYTAVAIAVAAWKAKSVKRIVLARPAVEAGESLGFLPGD EEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHCCCCCCCCCCH LAQKIDPYLRPLYDALQDMLTAEKLKSLTEKRIIEIVPLAYMRGRTLNNAFIILDEAQNA HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC SSKQMKMCLTRLGVNSKAIITGDVTQIDLPSELESGLINSQHILKDIKGISFVHLDKSDV CHHHHHHHHHHHCCCCCEEEECCCEEECCCHHHHHCCCCHHHHHHHHCCCEEEEECHHHH VRHKLVRDIINAYEIHEQK HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SIEKTIEIQGREPVLLFGPYDSYLKKIREAFPDVQINARGTTINIKGGSNDVAGVEQIF CCCCEEEECCCCCEEEECCHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCHHHHHHHH NELVFLADRHGEILPTDLSALISLALSPAPRHKASTVDDQDIIVATADYTVRAKTNGQRR HHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCEE MVAEAKTNDILFAIGPAGTGKTYTAVAIAVAAWKAKSVKRIVLARPAVEAGESLGFLPGD EEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHCCCCCCCCCCH LAQKIDPYLRPLYDALQDMLTAEKLKSLTEKRIIEIVPLAYMRGRTLNNAFIILDEAQNA HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC SSKQMKMCLTRLGVNSKAIITGDVTQIDLPSELESGLINSQHILKDIKGISFVHLDKSDV CHHHHHHHHHHHCCCCCEEEECCCEEECCCHHHHHCCCCHHHHHHHHCCCEEEEECHHHH VRHKLVRDIINAYEIHEQK HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]