Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357000
Identifier: 119357000
GI number: 119357000
Start: 1336561
End: 1337472
Strand: Direct
Name: 119357000
Synonym: Cpha266_1184
Alternate gene names: NA
Gene position: 1336561-1337472 (Clockwise)
Preceding gene: 119356998
Following gene: 119357001
Centisome position: 42.65
GC content: 46.82
Gene sequence:
>912_bases ATGAAACCTCCATCTGAAACATCTATGCCTCGGTTGATCAATTCTGACGATTATCGGATAAGAGAGGGCTCTTCGGTCGA TCTTGTTCACTCTCCAACGGTCATTCCTTCCTTTTATACATCTACGGGGCACTATAAAAAACTCCTGCAGGAACAGATCG AAAAGCTCAGCAAGTTGCAGCAGCTTCACTATGCCGATAACCGTTATTCTGTGCTGCTTGTTTTTCAGGCTATGGATGCG GCAGGCAAAGACAGCATGATCAAGCATGTCATGACCGGCATCAACCCCCAGGGTTGCCAGGTATACAGCTTCAAGCATCC TTCGCCGAAGGAGCTTCAACACGATTTTCTCTGGCGAACGAATTACTGTCTTCCTGAACGGGGCAGGATCGGCATTTTCA ATCGATCCTATTATGAAGAGGTTCTTATTGTTCGCGTTCATCCCGCAATTCTTGAGAGTCAGAACGTTCCCAATGGATCG ATTGATGGTGAAACCGTCTGGGAACACCGTTTCCGCTCTATCGTTGATCAGGAAACCCATCTTTACCGGAATGGAACCCG TATCCTCAAGTTTTTTCTGCATGTTTCAAAAGAGGAGCAGCGTCGGAGATTTCTTGAGAGGATAGATAAACCGGAAAAAA ACTGGAAATTCAGTATTGCGGATGTTGAAGAGCGCCGGTACTGGGATCAGTATATGGTGGCTTATGACGCATGCCTCTCG GCAACAAGCAGGGATTATGCTCCCTGGTATGTGGTTCCGGCCGACGATAAAAAAAATGCAAGGCTGATTGTTTCGCGTAT TCTCGTCGATGCGTTTACCGCTCTCAATCTGAGCTATCCCAAGCTTGGAGATGTCAGGCAGAAAGAGCTTGAAACCTGTC GAAAACTTCTTGTAAAGGAGCATGGTGATTAG
Upstream 100 bases:
>100_bases AAAGCAGCAATATGAACGAAAAGAAGAAGCGTTCTGTTTACAAAAAGGTGGTTCTTTTTCCATGTTTGTTTCTTCCGGCA AACACCGTTAACGCTTTTCC
Downstream 100 bases:
>100_bases TTGTTGAGTAACGATGTAACGGTTTGTTGTGTCAAACGTCAACAGAACTTTTTTCGATTATGCACTACCGGATTGAAAAA GATACTATGGGAGAAGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MKPPSETSMPRLINSDDYRIREGSSVDLVHSPTVIPSFYTSTGHYKKLLQEQIEKLSKLQQLHYADNRYSVLLVFQAMDA AGKDSMIKHVMTGINPQGCQVYSFKHPSPKELQHDFLWRTNYCLPERGRIGIFNRSYYEEVLIVRVHPAILESQNVPNGS IDGETVWEHRFRSIVDQETHLYRNGTRILKFFLHVSKEEQRRRFLERIDKPEKNWKFSIADVEERRYWDQYMVAYDACLS ATSRDYAPWYVVPADDKKNARLIVSRILVDAFTALNLSYPKLGDVRQKELETCRKLLVKEHGD
Sequences:
>Translated_303_residues MKPPSETSMPRLINSDDYRIREGSSVDLVHSPTVIPSFYTSTGHYKKLLQEQIEKLSKLQQLHYADNRYSVLLVFQAMDA AGKDSMIKHVMTGINPQGCQVYSFKHPSPKELQHDFLWRTNYCLPERGRIGIFNRSYYEEVLIVRVHPAILESQNVPNGS IDGETVWEHRFRSIVDQETHLYRNGTRILKFFLHVSKEEQRRRFLERIDKPEKNWKFSIADVEERRYWDQYMVAYDACLS ATSRDYAPWYVVPADDKKNARLIVSRILVDAFTALNLSYPKLGDVRQKELETCRKLLVKEHGD >Mature_303_residues MKPPSETSMPRLINSDDYRIREGSSVDLVHSPTVIPSFYTSTGHYKKLLQEQIEKLSKLQQLHYADNRYSVLLVFQAMDA AGKDSMIKHVMTGINPQGCQVYSFKHPSPKELQHDFLWRTNYCLPERGRIGIFNRSYYEEVLIVRVHPAILESQNVPNGS IDGETVWEHRFRSIVDQETHLYRNGTRILKFFLHVSKEEQRRRFLERIDKPEKNWKFSIADVEERRYWDQYMVAYDACLS ATSRDYAPWYVVPADDKKNARLIVSRILVDAFTALNLSYPKLGDVRQKELETCRKLLVKEHGD
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 35531; Mature: 35531
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPPSETSMPRLINSDDYRIREGSSVDLVHSPTVIPSFYTSTGHYKKLLQEQIEKLSKLQ CCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHH QLHYADNRYSVLLVFQAMDAAGKDSMIKHVMTGINPQGCQVYSFKHPSPKELQHDFLWRT HHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHC NYCLPERGRIGIFNRSYYEEVLIVRVHPAILESQNVPNGSIDGETVWEHRFRSIVDQETH CCCCCCCCCEEEECCHHHHEEEEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH LYRNGTRILKFFLHVSKEEQRRRFLERIDKPEKNWKFSIADVEERRYWDQYMVAYDACLS HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH ATSRDYAPWYVVPADDKKNARLIVSRILVDAFTALNLSYPKLGDVRQKELETCRKLLVKE CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC HGD CCC >Mature Secondary Structure MKPPSETSMPRLINSDDYRIREGSSVDLVHSPTVIPSFYTSTGHYKKLLQEQIEKLSKLQ CCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHH QLHYADNRYSVLLVFQAMDAAGKDSMIKHVMTGINPQGCQVYSFKHPSPKELQHDFLWRT HHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHC NYCLPERGRIGIFNRSYYEEVLIVRVHPAILESQNVPNGSIDGETVWEHRFRSIVDQETH CCCCCCCCCEEEECCHHHHEEEEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH LYRNGTRILKFFLHVSKEEQRRRFLERIDKPEKNWKFSIADVEERRYWDQYMVAYDACLS HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH ATSRDYAPWYVVPADDKKNARLIVSRILVDAFTALNLSYPKLGDVRQKELETCRKLLVKE CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC HGD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]