Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119356972
Identifier: 119356972
GI number: 119356972
Start: 1301794
End: 1303626
Strand: Direct
Name: 119356972
Synonym: Cpha266_1155
Alternate gene names: NA
Gene position: 1301794-1303626 (Clockwise)
Preceding gene: 119356971
Following gene: 119356973
Centisome position: 41.54
GC content: 55.92
Gene sequence:
>1833_bases ATGACCAGACCTGCCAGAAGCATCCTCTACCTCCTGCCGGGGAGCATCGCACTCATGCTTGCGCTTATCTTTCCTCTGCA CAATACTCAGGCCGTCACGATAGTATCGATCAAGGTCGAGCAGGACATGATAACGCCAAACAGCCCAACCTCGCAGAGCA GCGTGGCTGGCAGTGCGGTAGCGCAACCTCCATCAGTTAAAATCACTGATGCATTCGGTAATCCGGCATCCGGCGTTGAC GTAACGTTTACGATAACAGGAGGAGAAGGATCGATAACGGGCGACGGAAACGTCACCAGCGGCCCGGACGGAATCGCAGC GATAGGAGGCTGGACGCTCGGCGCCATTGCAGGTGCCAATACCATGACGGCCGTCAATGCCGGATATGCCGGCTCTCCCG TAACGTTTACGGCAACAGGCACGTCAGGCGAGGCGACAAAGGTGGTACTGACGAGGCAATCTGCCGGTACGGCATCAGGA TCGGCATTCACGACGCAGCCGCAAGTTACGATCCAGGACGCAGCGGGCAATACCGTCTCCAGCTCAACTGCTCGTGTGAC GGCGACGATCAGCGACGACGGCACTCTGGTGGGCACCACTACTGCCATCGCAACGGCAGGAGTTGCGACCTTTACGAACC TCGGCATAGCCGGAAAAGCAGGAACCGCATATACGATTACCTACACCGTATCAAATCTCGATCCGGCGAATCAGATCGTC ACGGTCACACCCGGCCTTGCCAGCAAGCTCGCAATCACCAGGCAGCCATCGTCGAGCACGGTATCAAAAGCGCCATTTGC CGTGCAGCCGGAAGTTACGATCCAGGACGCAGAGGGCAACGCGATGACCGACGCGACAAACGCCATAACCCTGACGCTTT CGACCGGAACAGGTAAGCTCGACGGCATGATGACGATGAATGCCGTCGCCGGAGTAGCGGACTTCAGCGGCAACGGGTTG AACATCGATCTTGCAGGAGCAGACAAGGTGCTCACGGCATCCGCAGTGGGGTTGACGGCTGCTGCGACCAACGCCTTTGC CATCACGGCAGGCCCAGCATCACAGATTGAGATAGTAACGCAACCGGGAGGAAACAGCGTTGTCAGCGGAACCATGCTTG CAGGGCAGCCAGAGATAAAGGTTTCCGATGAGGGAGGCAACGGAATCACGGGCGTTACGGTCACCGCCACTCTCGAAGGC GCATACGGTACTTTGACCAATAATACTGCCATAACAGATGACAACGGTAAAGCAACGTTCACGGAGTTGACCTTTACAAG CACCTTTGCTACGGCAAGTCCGGACTACACGATCAAGTTTTCTTACGATACTATAAGTGTAACATCCGGGTCGGTTACTC ATACCCTTGCAGTAGGCAAACCGTATCAGGGCGGGTACATCGCTTATCTCGGCTCCCCATTTACTACCGGGCTTATTGCC GCACAAAGGGACTTGGGTGATCTACAATGGGGTGGTTTTGGTACGTTAATAGGAACAGGCGGAGGTCTTGGAGAAGGTAA GGTCAATACGGAAAGGATTGTTGTACAGCTTGCAAATAACCCCGGTTATGCTGCGGGAGCCTGCGATTCATACAGTGTAA CAGAAGGAGGGGTTACATACGATGACTGGTACCTGCCGAGCAGGGATGAGTTGCACCAGCTCTATCAAAACCTCCATAAC AGGCATATTGGCGGTTTTGCTCCCAGCGGCTACTGGAGTTCTACGGAGGACGGTGCGGGGGGCGGCGCATGGACACAGAA CTTCGACAATGGGAGCCAGTACGGCGACTACAAGGGCCTCGAGCGGCGGGTACGGCCTGTCCGGGCTTTTTAA
Upstream 100 bases:
>100_bases AGCAACTTCCCCAGGGGCTGGCCGACTACCTGATCAAGGTAAACAGCAATGGCGCCTACACCGTAAAAATGACAACGAAC TAACCTCATCAGGGCTCATC
Downstream 100 bases:
>100_bases CTATTTATCAATTTCTTCAGGGGGTGCAGGGGGCTTGCCCCCTGCCGAAATATTGAGCTGATGGCACTGTACCGGTAACA AGGGCAGGAGATTCATTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MTRPARSILYLLPGSIALMLALIFPLHNTQAVTIVSIKVEQDMITPNSPTSQSSVAGSAVAQPPSVKITDAFGNPASGVD VTFTITGGEGSITGDGNVTSGPDGIAAIGGWTLGAIAGANTMTAVNAGYAGSPVTFTATGTSGEATKVVLTRQSAGTASG SAFTTQPQVTIQDAAGNTVSSSTARVTATISDDGTLVGTTTAIATAGVATFTNLGIAGKAGTAYTITYTVSNLDPANQIV TVTPGLASKLAITRQPSSSTVSKAPFAVQPEVTIQDAEGNAMTDATNAITLTLSTGTGKLDGMMTMNAVAGVADFSGNGL NIDLAGADKVLTASAVGLTAAATNAFAITAGPASQIEIVTQPGGNSVVSGTMLAGQPEIKVSDEGGNGITGVTVTATLEG AYGTLTNNTAITDDNGKATFTELTFTSTFATASPDYTIKFSYDTISVTSGSVTHTLAVGKPYQGGYIAYLGSPFTTGLIA AQRDLGDLQWGGFGTLIGTGGGLGEGKVNTERIVVQLANNPGYAAGACDSYSVTEGGVTYDDWYLPSRDELHQLYQNLHN RHIGGFAPSGYWSSTEDGAGGGAWTQNFDNGSQYGDYKGLERRVRPVRAF
Sequences:
>Translated_610_residues MTRPARSILYLLPGSIALMLALIFPLHNTQAVTIVSIKVEQDMITPNSPTSQSSVAGSAVAQPPSVKITDAFGNPASGVD VTFTITGGEGSITGDGNVTSGPDGIAAIGGWTLGAIAGANTMTAVNAGYAGSPVTFTATGTSGEATKVVLTRQSAGTASG SAFTTQPQVTIQDAAGNTVSSSTARVTATISDDGTLVGTTTAIATAGVATFTNLGIAGKAGTAYTITYTVSNLDPANQIV TVTPGLASKLAITRQPSSSTVSKAPFAVQPEVTIQDAEGNAMTDATNAITLTLSTGTGKLDGMMTMNAVAGVADFSGNGL NIDLAGADKVLTASAVGLTAAATNAFAITAGPASQIEIVTQPGGNSVVSGTMLAGQPEIKVSDEGGNGITGVTVTATLEG AYGTLTNNTAITDDNGKATFTELTFTSTFATASPDYTIKFSYDTISVTSGSVTHTLAVGKPYQGGYIAYLGSPFTTGLIA AQRDLGDLQWGGFGTLIGTGGGLGEGKVNTERIVVQLANNPGYAAGACDSYSVTEGGVTYDDWYLPSRDELHQLYQNLHN RHIGGFAPSGYWSSTEDGAGGGAWTQNFDNGSQYGDYKGLERRVRPVRAF >Mature_609_residues TRPARSILYLLPGSIALMLALIFPLHNTQAVTIVSIKVEQDMITPNSPTSQSSVAGSAVAQPPSVKITDAFGNPASGVDV TFTITGGEGSITGDGNVTSGPDGIAAIGGWTLGAIAGANTMTAVNAGYAGSPVTFTATGTSGEATKVVLTRQSAGTASGS AFTTQPQVTIQDAAGNTVSSSTARVTATISDDGTLVGTTTAIATAGVATFTNLGIAGKAGTAYTITYTVSNLDPANQIVT VTPGLASKLAITRQPSSSTVSKAPFAVQPEVTIQDAEGNAMTDATNAITLTLSTGTGKLDGMMTMNAVAGVADFSGNGLN IDLAGADKVLTASAVGLTAAATNAFAITAGPASQIEIVTQPGGNSVVSGTMLAGQPEIKVSDEGGNGITGVTVTATLEGA YGTLTNNTAITDDNGKATFTELTFTSTFATASPDYTIKFSYDTISVTSGSVTHTLAVGKPYQGGYIAYLGSPFTTGLIAA QRDLGDLQWGGFGTLIGTGGGLGEGKVNTERIVVQLANNPGYAAGACDSYSVTEGGVTYDDWYLPSRDELHQLYQNLHNR HIGGFAPSGYWSSTEDGAGGGAWTQNFDNGSQYGDYKGLERRVRPVRAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61692; Mature: 61561
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPARSILYLLPGSIALMLALIFPLHNTQAVTIVSIKVEQDMITPNSPTSQSSVAGSAV CCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHH AQPPSVKITDAFGNPASGVDVTFTITGGEGSITGDGNVTSGPDGIAAIGGWTLGAIAGAN CCCCCEEEEECCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCEEEECCEEEEEECCCC TMTAVNAGYAGSPVTFTATGTSGEATKVVLTRQSAGTASGSAFTTQPQVTIQDAAGNTVS EEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCEEECCCCEEEECCCCCEEC SSTARVTATISDDGTLVGTTTAIATAGVATFTNLGIAGKAGTAYTITYTVSNLDPANQIV CCCEEEEEEECCCCEEEEEHHHHHHHCHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCEE TVTPGLASKLAITRQPSSSTVSKAPFAVQPEVTIQDAEGNAMTDATNAITLTLSTGTGKL EECCCCCCEEEEEECCCCCCCCCCCEEECCCEEEEECCCCEEECCCCEEEEEEECCCCCC DGMMTMNAVAGVADFSGNGLNIDLAGADKVLTASAVGLTAAATNAFAITAGPASQIEIVT CCEEEEHHHHEEEECCCCCEEEEECCCCCEEEEECCCEEEECCCEEEEECCCCCEEEEEE QPGGNSVVSGTMLAGQPEIKVSDEGGNGITGVTVTATLEGAYGTLTNNTAITDDNGKATF CCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEEEEEECCCEEEEECCEEEECCCCCEEE TELTFTSTFATASPDYTIKFSYDTISVTSGSVTHTLAVGKPYQGGYIAYLGSPFTTGLIA EEEEEEEEEECCCCCEEEEEEEEEEEEECCCEEEEEEECCCCCCCEEEEECCCCHHHEEE AQRDLGDLQWGGFGTLIGTGGGLGEGKVNTERIVVQLANNPGYAAGACDSYSVTEGGVTY ECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEECCCCCEE DDWYLPSRDELHQLYQNLHNRHIGGFAPSGYWSSTEDGAGGGAWTQNFDNGSQYGDYKGL CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH ERRVRPVRAF HHHCCCCCCC >Mature Secondary Structure TRPARSILYLLPGSIALMLALIFPLHNTQAVTIVSIKVEQDMITPNSPTSQSSVAGSAV CCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHH AQPPSVKITDAFGNPASGVDVTFTITGGEGSITGDGNVTSGPDGIAAIGGWTLGAIAGAN CCCCCEEEEECCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCEEEECCEEEEEECCCC TMTAVNAGYAGSPVTFTATGTSGEATKVVLTRQSAGTASGSAFTTQPQVTIQDAAGNTVS EEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCEEECCCCEEEECCCCCEEC SSTARVTATISDDGTLVGTTTAIATAGVATFTNLGIAGKAGTAYTITYTVSNLDPANQIV CCCEEEEEEECCCCEEEEEHHHHHHHCHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCEE TVTPGLASKLAITRQPSSSTVSKAPFAVQPEVTIQDAEGNAMTDATNAITLTLSTGTGKL EECCCCCCEEEEEECCCCCCCCCCCEEECCCEEEEECCCCEEECCCCEEEEEEECCCCCC DGMMTMNAVAGVADFSGNGLNIDLAGADKVLTASAVGLTAAATNAFAITAGPASQIEIVT CCEEEEHHHHEEEECCCCCEEEEECCCCCEEEEECCCEEEECCCEEEEECCCCCEEEEEE QPGGNSVVSGTMLAGQPEIKVSDEGGNGITGVTVTATLEGAYGTLTNNTAITDDNGKATF CCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEEEEEECCCEEEEECCEEEECCCCCEEE TELTFTSTFATASPDYTIKFSYDTISVTSGSVTHTLAVGKPYQGGYIAYLGSPFTTGLIA EEEEEEEEEECCCCCEEEEEEEEEEEEECCCEEEEEEECCCCCCCEEEEECCCCHHHEEE AQRDLGDLQWGGFGTLIGTGGGLGEGKVNTERIVVQLANNPGYAAGACDSYSVTEGGVTY ECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEECCCCCEE DDWYLPSRDELHQLYQNLHNRHIGGFAPSGYWSSTEDGAGGGAWTQNFDNGSQYGDYKGL CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH ERRVRPVRAF HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA