Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119356971
Identifier: 119356971
GI number: 119356971
Start: 1300241
End: 1301776
Strand: Direct
Name: 119356971
Synonym: Cpha266_1154
Alternate gene names: NA
Gene position: 1300241-1301776 (Clockwise)
Preceding gene: 119356970
Following gene: 119356972
Centisome position: 41.49
GC content: 55.01
Gene sequence:
>1536_bases ATGTCCCATCATTTATTCTCCAGTCTGTGGATTGCCCTGATTATTTTTTCATGCATCGACAATCCATCTGAAGCAGCAGA AAGCCAGACAGAACCGTCTTCTGCCATTTATGCTGCAGGTCAAACGTATACATCGCCTGGGATAGCCAGCGATAATACTC TCGTTCAAACGGCATCCGGAGTGCTCAGCTCCATGAAATCGCAAGCGGAACTCGGCAATGAACCATCGACGCCATCAATC GAGTCGCTCCTGCCGACCGTGAGATTTGCCATGGCTGACGGCAAACTCAACGGCAGTATTGCACCGCAATCGAGCTCTCT TGCATACCGAGGCGAACGCCAATACTTTCTTGCCGATGTCGGGCTGGGGTATTACAAACCATCATGGGGAGATGGTCGTC TCCGCGGAAAGGTCGGCATGGCAGGCCTGCTTGGCAGTCATGCCGCAGCAGGGGTAACGGCATCCCTTGACGACTATCTT CTTGACGTGGTTGTCAATACCATCTGGCAGACGCCGCTTGACGGTCTGCGCATCAGGGCATCGTTCGGCTACCTTTGGGG CGAAAAAGAGTTTGCGTTTCTGTCGGGTCCCGCCATGCAGGATCTCGATCAATATAGCTGGGTTATCGGCGGAGACTGGA TCATGCCCGATGATGCTGCTGATATCGGTTTGCATGCGCTCGGAATAACGATCTGGGGCGCACAGGCCGACGAAGATTCT CATGACGATCCGGTTTTTTTTATGAAAGAGAGTGCGGCAGCCTATACCATTTACCGCGATCCTCTTGAACTGAGCGAGGG GCGTCTCTTCGGTGTGGCAGTCAATGCGCAGGTTGCTTTGCATTCCAATCTTGTCACGAAAGGATCCGTCGGGTACGAGT CGCTTGAATTTCCTTTCGCCGACGGAACGAAAGAACAGCACCGTTCGCTCTACAGCGACCTCTCGCTGGTATGGGAGCCG ATCGATGATCTCGTTATCGATGCGGAATGGAAGAAAGGCAGCAGCGAAGAGCGATTCAGCCTCGGGGCAGGGATCGGCCC GGTGCGCGTCAGTTCCTGGTACAGTGCCGGAGAAAACGGACTTGACGACGACAAAGGCATCATGCTCACCTGTACGCTCG GGCTGGGCGGGGGCACGCAGCGCACGGCGCTCTCCGCCCGAATGCGGCCTAAACGAACCGAGGGTGGCGGGGCCATGCTG CAGCAGGCAATGGAACGGCCGCAGCAGATGCCGACAACCTTTCTCGCCAAAGTTGACGAAACTGCCGTAACTACTGAAGC CGTCATAGAAAAAGCCGGACTCGACAACAGCGCGGAGGTTGACCGGCAGGGCGATATCCATATCGTTATCGGTACCGGCA CGCCTATCATTGAAAGCGTCCAGCGCAATGGCTCTCCTTTTACCTATACCGGCATTATCGAAACCACCGCAACAGGCATC GTCATCCGTACGAAGCAACTTCCCCAGGGGCTGGCCGACTACCTGATCAAGGTAAACAGCAATGGCGCCTACACCGTAAA AATGACAACGAACTAA
Upstream 100 bases:
>100_bases CCGTATGACGCAATAAATTGCAAAACCGAAAAGAAAAGAGCATTATTGTAGGGTTATGCAAAATACTTGACCGGTTGACA AACTTAATTTCTGATTTTGG
Downstream 100 bases:
>100_bases CCTCATCAGGGCTCATCATGACCAGACCTGCCAGAAGCATCCTCTACCTCCTGCCGGGGAGCATCGCACTCATGCTTGCG CTTATCTTTCCTCTGCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MSHHLFSSLWIALIIFSCIDNPSEAAESQTEPSSAIYAAGQTYTSPGIASDNTLVQTASGVLSSMKSQAELGNEPSTPSI ESLLPTVRFAMADGKLNGSIAPQSSSLAYRGERQYFLADVGLGYYKPSWGDGRLRGKVGMAGLLGSHAAAGVTASLDDYL LDVVVNTIWQTPLDGLRIRASFGYLWGEKEFAFLSGPAMQDLDQYSWVIGGDWIMPDDAADIGLHALGITIWGAQADEDS HDDPVFFMKESAAAYTIYRDPLELSEGRLFGVAVNAQVALHSNLVTKGSVGYESLEFPFADGTKEQHRSLYSDLSLVWEP IDDLVIDAEWKKGSSEERFSLGAGIGPVRVSSWYSAGENGLDDDKGIMLTCTLGLGGGTQRTALSARMRPKRTEGGGAML QQAMERPQQMPTTFLAKVDETAVTTEAVIEKAGLDNSAEVDRQGDIHIVIGTGTPIIESVQRNGSPFTYTGIIETTATGI VIRTKQLPQGLADYLIKVNSNGAYTVKMTTN
Sequences:
>Translated_511_residues MSHHLFSSLWIALIIFSCIDNPSEAAESQTEPSSAIYAAGQTYTSPGIASDNTLVQTASGVLSSMKSQAELGNEPSTPSI ESLLPTVRFAMADGKLNGSIAPQSSSLAYRGERQYFLADVGLGYYKPSWGDGRLRGKVGMAGLLGSHAAAGVTASLDDYL LDVVVNTIWQTPLDGLRIRASFGYLWGEKEFAFLSGPAMQDLDQYSWVIGGDWIMPDDAADIGLHALGITIWGAQADEDS HDDPVFFMKESAAAYTIYRDPLELSEGRLFGVAVNAQVALHSNLVTKGSVGYESLEFPFADGTKEQHRSLYSDLSLVWEP IDDLVIDAEWKKGSSEERFSLGAGIGPVRVSSWYSAGENGLDDDKGIMLTCTLGLGGGTQRTALSARMRPKRTEGGGAML QQAMERPQQMPTTFLAKVDETAVTTEAVIEKAGLDNSAEVDRQGDIHIVIGTGTPIIESVQRNGSPFTYTGIIETTATGI VIRTKQLPQGLADYLIKVNSNGAYTVKMTTN >Mature_510_residues SHHLFSSLWIALIIFSCIDNPSEAAESQTEPSSAIYAAGQTYTSPGIASDNTLVQTASGVLSSMKSQAELGNEPSTPSIE SLLPTVRFAMADGKLNGSIAPQSSSLAYRGERQYFLADVGLGYYKPSWGDGRLRGKVGMAGLLGSHAAAGVTASLDDYLL DVVVNTIWQTPLDGLRIRASFGYLWGEKEFAFLSGPAMQDLDQYSWVIGGDWIMPDDAADIGLHALGITIWGAQADEDSH DDPVFFMKESAAAYTIYRDPLELSEGRLFGVAVNAQVALHSNLVTKGSVGYESLEFPFADGTKEQHRSLYSDLSLVWEPI DDLVIDAEWKKGSSEERFSLGAGIGPVRVSSWYSAGENGLDDDKGIMLTCTLGLGGGTQRTALSARMRPKRTEGGGAMLQ QAMERPQQMPTTFLAKVDETAVTTEAVIEKAGLDNSAEVDRQGDIHIVIGTGTPIIESVQRNGSPFTYTGIIETTATGIV IRTKQLPQGLADYLIKVNSNGAYTVKMTTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54866; Mature: 54735
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHHLFSSLWIALIIFSCIDNPSEAAESQTEPSSAIYAAGQTYTSPGIASDNTLVQTASG CCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHH VLSSMKSQAELGNEPSTPSIESLLPTVRFAMADGKLNGSIAPQSSSLAYRGERQYFLADV HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCEEECCCCEEEEEEC GLGYYKPSWGDGRLRGKVGMAGLLGSHAAAGVTASLDDYLLDVVVNTIWQTPLDGLRIRA CCCCCCCCCCCCEEECCCCHHHHHCCHHHCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEE SFGYLWGEKEFAFLSGPAMQDLDQYSWVIGGDWIMPDDAADIGLHALGITIWGAQADEDS EECEEECCCCEEEECCCCHHHHHHCCEEECCCEECCCCCHHCCEEEEEEEEECCCCCCCC HDDPVFFMKESAAAYTIYRDPLELSEGRLFGVAVNAQVALHSNLVTKGSVGYESLEFPFA CCCCEEEEECCCEEEEEEECCHHCCCCEEEEEEEEEEEEEECCCEECCCCCCCEEECCCC DGTKEQHRSLYSDLSLVWEPIDDLVIDAEWKKGSSEERFSLGAGIGPVRVSSWYSAGENG CCCHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCEECCCCCCCEEEHHHHCCCCCC LDDDKGIMLTCTLGLGGGTQRTALSARMRPKRTEGGGAMLQQAMERPQQMPTTFLAKVDE CCCCCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCC TAVTTEAVIEKAGLDNSAEVDRQGDIHIVIGTGTPIIESVQRNGSPFTYTGIIETTATGI HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCEEEEEEEEECCCEE VIRTKQLPQGLADYLIKVNSNGAYTVKMTTN EEEEHHHHHHHHHEEEEECCCCEEEEEEECC >Mature Secondary Structure SHHLFSSLWIALIIFSCIDNPSEAAESQTEPSSAIYAAGQTYTSPGIASDNTLVQTASG CCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHH VLSSMKSQAELGNEPSTPSIESLLPTVRFAMADGKLNGSIAPQSSSLAYRGERQYFLADV HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCEEECCCCEEEEEEC GLGYYKPSWGDGRLRGKVGMAGLLGSHAAAGVTASLDDYLLDVVVNTIWQTPLDGLRIRA CCCCCCCCCCCCEEECCCCHHHHHCCHHHCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEE SFGYLWGEKEFAFLSGPAMQDLDQYSWVIGGDWIMPDDAADIGLHALGITIWGAQADEDS EECEEECCCCEEEECCCCHHHHHHCCEEECCCEECCCCCHHCCEEEEEEEEECCCCCCCC HDDPVFFMKESAAAYTIYRDPLELSEGRLFGVAVNAQVALHSNLVTKGSVGYESLEFPFA CCCCEEEEECCCEEEEEEECCHHCCCCEEEEEEEEEEEEEECCCEECCCCCCCEEECCCC DGTKEQHRSLYSDLSLVWEPIDDLVIDAEWKKGSSEERFSLGAGIGPVRVSSWYSAGENG CCCHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCEECCCCCCCEEEHHHHCCCCCC LDDDKGIMLTCTLGLGGGTQRTALSARMRPKRTEGGGAMLQQAMERPQQMPTTFLAKVDE CCCCCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCC TAVTTEAVIEKAGLDNSAEVDRQGDIHIVIGTGTPIIESVQRNGSPFTYTGIIETTATGI HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCEEEEEEEEECCCEE VIRTKQLPQGLADYLIKVNSNGAYTVKMTTN EEEEHHHHHHHHHEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA