Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119356960
Identifier: 119356960
GI number: 119356960
Start: 1292412
End: 1292855
Strand: Direct
Name: 119356960
Synonym: Cpha266_1143
Alternate gene names: NA
Gene position: 1292412-1292855 (Clockwise)
Preceding gene: 119356959
Following gene: 119356961
Centisome position: 41.24
GC content: 46.17
Gene sequence:
>444_bases ATGCGTGAGAAGGGTTATTACGTCATCCTGAAACAGCATGTACCGCCTGACACCTGGGTTGCGTTTGTGGAGGAGCTTAT ACAGGATATTTCCCAAAAAAAGAGATGGCATGATGAAGAACTCATTGCCGGTATTTTCATAACAGAAGGGTGGAGCGAGA GGCTGTTGGAGCTGGTCTGCAACTCTCCTGACTTGCGCACCATCGGAAAGTACGAAACGCATCTTTCGGGAAAATACAGC GCTGAAGTTGTTGATCTGTATCTCAATGCTCTTCTTGCATACGTGAAAACCAATGTGGGAAGAAACCACTACAAGGAGGC CTGCAGGTATCTCCGGAGAGTGATCAAGCTTGGTGCAAGAGAAAAGGCAAACGAGGTAATAGCATTTTTCAGGACTCAAT ATCGTAATCGAACAGCATTGATGGAGGAGTTACGTAACGTGTAG
Upstream 100 bases:
>100_bases GGTTTGAGAACAGGTAAATGTCCCATGTTCAGGTCACAACAATATTCTGAGTGCCCAAAAAATCATAGAATATGCCTGCT CTCTGTTTCTTGAGCATTTC
Downstream 100 bases:
>100_bases CATCCTGCTCATTTTTATTGGTCGAATATGGATGTTGAACTTTCTCTTGAATCCATCTTGATGGAGAGGACTTCATGAAA CAATATCTCAATTGCAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MREKGYYVILKQHVPPDTWVAFVEELIQDISQKKRWHDEELIAGIFITEGWSERLLELVCNSPDLRTIGKYETHLSGKYS AEVVDLYLNALLAYVKTNVGRNHYKEACRYLRRVIKLGAREKANEVIAFFRTQYRNRTALMEELRNV
Sequences:
>Translated_147_residues MREKGYYVILKQHVPPDTWVAFVEELIQDISQKKRWHDEELIAGIFITEGWSERLLELVCNSPDLRTIGKYETHLSGKYS AEVVDLYLNALLAYVKTNVGRNHYKEACRYLRRVIKLGAREKANEVIAFFRTQYRNRTALMEELRNV >Mature_147_residues MREKGYYVILKQHVPPDTWVAFVEELIQDISQKKRWHDEELIAGIFITEGWSERLLELVCNSPDLRTIGKYETHLSGKYS AEVVDLYLNALLAYVKTNVGRNHYKEACRYLRRVIKLGAREKANEVIAFFRTQYRNRTALMEELRNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17350; Mature: 17350
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREKGYYVILKQHVPPDTWVAFVEELIQDISQKKRWHDEELIAGIFITEGWSERLLELVC CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH NSPDLRTIGKYETHLSGKYSAEVVDLYLNALLAYVKTNVGRNHYKEACRYLRRVIKLGAR CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC EKANEVIAFFRTQYRNRTALMEELRNV HHHHHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MREKGYYVILKQHVPPDTWVAFVEELIQDISQKKRWHDEELIAGIFITEGWSERLLELVC CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH NSPDLRTIGKYETHLSGKYSAEVVDLYLNALLAYVKTNVGRNHYKEACRYLRRVIKLGAR CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC EKANEVIAFFRTQYRNRTALMEELRNV HHHHHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA