Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is yghO [H]
Identifier: 119356913
GI number: 119356913
Start: 1236377
End: 1237513
Strand: Direct
Name: yghO [H]
Synonym: Cpha266_1092
Alternate gene names: 119356913
Gene position: 1236377-1237513 (Clockwise)
Preceding gene: 119356912
Following gene: 119356915
Centisome position: 39.45
GC content: 45.56
Gene sequence:
>1137_bases ATGTCGATAGAGGTCAGGCAAGTTAAAAGCAAAAAGGAAAGAAAACAGTTTATCACCTTCGCATGGAAGATATACCGTGG CGATGCGGAACTGAACAAATACTGGGTTCCTCCGGTTATTGCTGATTATATGAAAACGCTTGATGTGGAAGCGTTTCCTC TGTATGAACACGCCGATCTCGCACTGTTTACAGCATGGAAAGACGGTGTTATGGCGGGGACCATTGCGGCCATTGCAAAC CGTCGGCACAATGAAATTCATCAGGATCGAGTAGGTTTTTGGGGTTTTTTTGAGTGTGTCAACGATCAGGATGTGGCTGA CGCACTGTTTGATGCGGCTTCGGGATGGCTCAAGACGAAAGGACTCACAGCAATGCGGGGACCTGTTAGTCCTTCGATGA ATGATCAATGCGGTATGCTTGTCAGAGGATATGACAGTTCTCCGGTTTTTCTTATGCTCTATAATCCTCCATATTATAAT GAACTTGCTCTTCGAAGCGGTCACCATATCGGTCAGGAGCTGCTCGCATGGTATATCGACCAGAAGATCATCGATATTGA CCGACTGCGTCGGATCGCCCTGCATGTCATGAAAAGGGAAGGGTTGAGCGTTCGTATCCTGAATATGAAAGATTTCGACA ATGAGATTGAAAAAGTAAGGGATATCTACAACAAGGCTTGGGAGCAAAACTGGGGTTTTGTTCCGATGACAAGAAAAGAG TTCGATTTTCTTGCAAAAAGTCTCAAGCCGCTTGCCAATCCTCATTATATCTATTTTGTTGAAGACAGTAACAAGCGGAC TATCGGATTTTCGCTTTCCCTGCCCGATATTAATCAGGCGTTGAAACATGTAAACGGCAACCCTTTTTCTCCCTTTGGCC TGGTGAAATATCTCTGGTACAGCAGAAAAATATCCATGGTCAGAACCATAACGATGGGAGTGCTTCCTGAATATCGCAAC AAGGGGATCGACAGTATTCTTAACACTCAGATTGCCGATTATGGCGGAAAGCACGGCGTTTTTGCAAGCGAGATGAGCTG GATACTGAAGTCAAACGAGGCTATGAGCAAACTGGCAAAGGTAATCGGCGGTAAGCCGTACAAGGAGTACGTGATCTACG AGAAAGCCATAGCGTAG
Upstream 100 bases:
>100_bases TAAATGATGCGACTTTTCTGCCGGGAACAGCGCAACCTTTTTTGACCCGGATTTTTGTTTGATCTTCCAATGATGATCGT AACCGTTAAAGCAGCTTATC
Downstream 100 bases:
>100_bases CGAATGCCGGGTATAAAAACAGAAAAGGAGCCGTTTCAGGCTCCTTTTCTGTTTCACACATTACCTGTATACACGGAGAA AAGAACAACTGACAAGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSIEVRQVKSKKERKQFITFAWKIYRGDAELNKYWVPPVIADYMKTLDVEAFPLYEHADLALFTAWKDGVMAGTIAAIAN RRHNEIHQDRVGFWGFFECVNDQDVADALFDAASGWLKTKGLTAMRGPVSPSMNDQCGMLVRGYDSSPVFLMLYNPPYYN ELALRSGHHIGQELLAWYIDQKIIDIDRLRRIALHVMKREGLSVRILNMKDFDNEIEKVRDIYNKAWEQNWGFVPMTRKE FDFLAKSLKPLANPHYIYFVEDSNKRTIGFSLSLPDINQALKHVNGNPFSPFGLVKYLWYSRKISMVRTITMGVLPEYRN KGIDSILNTQIADYGGKHGVFASEMSWILKSNEAMSKLAKVIGGKPYKEYVIYEKAIA
Sequences:
>Translated_378_residues MSIEVRQVKSKKERKQFITFAWKIYRGDAELNKYWVPPVIADYMKTLDVEAFPLYEHADLALFTAWKDGVMAGTIAAIAN RRHNEIHQDRVGFWGFFECVNDQDVADALFDAASGWLKTKGLTAMRGPVSPSMNDQCGMLVRGYDSSPVFLMLYNPPYYN ELALRSGHHIGQELLAWYIDQKIIDIDRLRRIALHVMKREGLSVRILNMKDFDNEIEKVRDIYNKAWEQNWGFVPMTRKE FDFLAKSLKPLANPHYIYFVEDSNKRTIGFSLSLPDINQALKHVNGNPFSPFGLVKYLWYSRKISMVRTITMGVLPEYRN KGIDSILNTQIADYGGKHGVFASEMSWILKSNEAMSKLAKVIGGKPYKEYVIYEKAIA >Mature_377_residues SIEVRQVKSKKERKQFITFAWKIYRGDAELNKYWVPPVIADYMKTLDVEAFPLYEHADLALFTAWKDGVMAGTIAAIANR RHNEIHQDRVGFWGFFECVNDQDVADALFDAASGWLKTKGLTAMRGPVSPSMNDQCGMLVRGYDSSPVFLMLYNPPYYNE LALRSGHHIGQELLAWYIDQKIIDIDRLRRIALHVMKREGLSVRILNMKDFDNEIEKVRDIYNKAWEQNWGFVPMTRKEF DFLAKSLKPLANPHYIYFVEDSNKRTIGFSLSLPDINQALKHVNGNPFSPFGLVKYLWYSRKISMVRTITMGVLPEYRNK GIDSILNTQIADYGGKHGVFASEMSWILKSNEAMSKLAKVIGGKPYKEYVIYEKAIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43536; Mature: 43405
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEVRQVKSKKERKQFITFAWKIYRGDAELNKYWVPPVIADYMKTLDVEAFPLYEHADL CCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCEECCHHHHHHHHHCCCCEECCCCCCCE ALFTAWKDGVMAGTIAAIANRRHNEIHQDRVGFWGFFECVNDQDVADALFDAASGWLKTK EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCCEECC GLTAMRGPVSPSMNDQCGMLVRGYDSSPVFLMLYNPPYYNELALRSGHHIGQELLAWYID CCEEECCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHCCCHHHHHHHHHHHH QKIIDIDRLRRIALHVMKREGLSVRILNMKDFDNEIEKVRDIYNKAWEQNWGFVPMTRKE HHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH FDFLAKSLKPLANPHYIYFVEDSNKRTIGFSLSLPDINQALKHVNGNPFSPFGLVKYLWY HHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHH SRKISMVRTITMGVLPEYRNKGIDSILNTQIADYGGKHGVFASEMSWILKSNEAMSKLAK HHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHH VIGGKPYKEYVIYEKAIA HHCCCCHHHHHHHHHHCC >Mature Secondary Structure SIEVRQVKSKKERKQFITFAWKIYRGDAELNKYWVPPVIADYMKTLDVEAFPLYEHADL CCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCEECCHHHHHHHHHCCCCEECCCCCCCE ALFTAWKDGVMAGTIAAIANRRHNEIHQDRVGFWGFFECVNDQDVADALFDAASGWLKTK EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCCEECC GLTAMRGPVSPSMNDQCGMLVRGYDSSPVFLMLYNPPYYNELALRSGHHIGQELLAWYID CCEEECCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHCCCHHHHHHHHHHHH QKIIDIDRLRRIALHVMKREGLSVRILNMKDFDNEIEKVRDIYNKAWEQNWGFVPMTRKE HHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH FDFLAKSLKPLANPHYIYFVEDSNKRTIGFSLSLPDINQALKHVNGNPFSPFGLVKYLWY HHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHH SRKISMVRTITMGVLPEYRNKGIDSILNTQIADYGGKHGVFASEMSWILKSNEAMSKLAK HHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHH VIGGKPYKEYVIYEKAIA HHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]