Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119356915
Identifier: 119356915
GI number: 119356915
Start: 1238568
End: 1239008
Strand: Direct
Name: 119356915
Synonym: Cpha266_1094
Alternate gene names: NA
Gene position: 1238568-1239008 (Clockwise)
Preceding gene: 119356913
Following gene: 119356916
Centisome position: 39.52
GC content: 45.8
Gene sequence:
>441_bases ATGGATTTTCACTGTTTGCCTATGAATGTTTGTTCTCTTCTTTTAAAGAGCAGATCGGCAGAGTATGAGGTACTGCGAAC AGTGCTTCGAACTTTTGGTGAGATCGAGGGCTATAGCAAAGGGTTTCTTTTTTCGCTGGAGCTTTCGATGAAGGAGGCTT TTGTCAATGCTGTCAGTCATGGGAACATGAGCAGGGAGGAGCTTTTCGTCGAATTTGTCATGCGCGCTGATTCTTCAGGA GAGCAAGTAACTCTGGAGGCAGATATCAGCGACAGCGGGAGTGGTTTCAATCTTGAGCAGCTTCCCGATCCGACTTTTGA GGGTTTTCTTTTACGTTCTTCCGGAAGAGGGCTTTATATTATTCGAAGTATCGCTGAAATTGTTGGAGTTGAAGTGTCCG ATGGAAGATCAACGCTCAAGCTTCGCTATACCCCGTACTGA
Upstream 100 bases:
>100_bases TAAATAATTTGTTTGGCTAATAAATTAAGCTTGCAGTGTCGTCCTTGAGGTGCTTGTTAACAAGAAAAGGTAATGGTAAA TTAAAAGACATGCCTTATGC
Downstream 100 bases:
>100_bases ACTGCGATTTTTTAGTAACGCTTAGAATTTATTATCAATTATGGAATTATCCCGAAGCGCAGCCTGGAGCGCCCTGGTTT TTCACAAGCATGAGGTTGAC
Product: putative anti-sigma regulatory factor, serine/threonine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MDFHCLPMNVCSLLLKSRSAEYEVLRTVLRTFGEIEGYSKGFLFSLELSMKEAFVNAVSHGNMSREELFVEFVMRADSSG EQVTLEADISDSGSGFNLEQLPDPTFEGFLLRSSGRGLYIIRSIAEIVGVEVSDGRSTLKLRYTPY
Sequences:
>Translated_146_residues MDFHCLPMNVCSLLLKSRSAEYEVLRTVLRTFGEIEGYSKGFLFSLELSMKEAFVNAVSHGNMSREELFVEFVMRADSSG EQVTLEADISDSGSGFNLEQLPDPTFEGFLLRSSGRGLYIIRSIAEIVGVEVSDGRSTLKLRYTPY >Mature_146_residues MDFHCLPMNVCSLLLKSRSAEYEVLRTVLRTFGEIEGYSKGFLFSLELSMKEAFVNAVSHGNMSREELFVEFVMRADSSG EQVTLEADISDSGSGFNLEQLPDPTFEGFLLRSSGRGLYIIRSIAEIVGVEVSDGRSTLKLRYTPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16337; Mature: 16337
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFHCLPMNVCSLLLKSRSAEYEVLRTVLRTFGEIEGYSKGFLFSLELSMKEAFVNAVSH CCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHC GNMSREELFVEFVMRADSSGEQVTLEADISDSGSGFNLEQLPDPTFEGFLLRSSGRGLYI CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCEEEECCCCCEEH IRSIAEIVGVEVSDGRSTLKLRYTPY HHHHHHHHCCEECCCCCEEEEEECCC >Mature Secondary Structure MDFHCLPMNVCSLLLKSRSAEYEVLRTVLRTFGEIEGYSKGFLFSLELSMKEAFVNAVSH CCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHC GNMSREELFVEFVMRADSSGEQVTLEADISDSGSGFNLEQLPDPTFEGFLLRSSGRGLYI CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCEEEECCCCCEEH IRSIAEIVGVEVSDGRSTLKLRYTPY HHHHHHHHCCEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA