Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119356915

Identifier: 119356915

GI number: 119356915

Start: 1238568

End: 1239008

Strand: Direct

Name: 119356915

Synonym: Cpha266_1094

Alternate gene names: NA

Gene position: 1238568-1239008 (Clockwise)

Preceding gene: 119356913

Following gene: 119356916

Centisome position: 39.52

GC content: 45.8

Gene sequence:

>441_bases
ATGGATTTTCACTGTTTGCCTATGAATGTTTGTTCTCTTCTTTTAAAGAGCAGATCGGCAGAGTATGAGGTACTGCGAAC
AGTGCTTCGAACTTTTGGTGAGATCGAGGGCTATAGCAAAGGGTTTCTTTTTTCGCTGGAGCTTTCGATGAAGGAGGCTT
TTGTCAATGCTGTCAGTCATGGGAACATGAGCAGGGAGGAGCTTTTCGTCGAATTTGTCATGCGCGCTGATTCTTCAGGA
GAGCAAGTAACTCTGGAGGCAGATATCAGCGACAGCGGGAGTGGTTTCAATCTTGAGCAGCTTCCCGATCCGACTTTTGA
GGGTTTTCTTTTACGTTCTTCCGGAAGAGGGCTTTATATTATTCGAAGTATCGCTGAAATTGTTGGAGTTGAAGTGTCCG
ATGGAAGATCAACGCTCAAGCTTCGCTATACCCCGTACTGA

Upstream 100 bases:

>100_bases
TAAATAATTTGTTTGGCTAATAAATTAAGCTTGCAGTGTCGTCCTTGAGGTGCTTGTTAACAAGAAAAGGTAATGGTAAA
TTAAAAGACATGCCTTATGC

Downstream 100 bases:

>100_bases
ACTGCGATTTTTTAGTAACGCTTAGAATTTATTATCAATTATGGAATTATCCCGAAGCGCAGCCTGGAGCGCCCTGGTTT
TTCACAAGCATGAGGTTGAC

Product: putative anti-sigma regulatory factor, serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MDFHCLPMNVCSLLLKSRSAEYEVLRTVLRTFGEIEGYSKGFLFSLELSMKEAFVNAVSHGNMSREELFVEFVMRADSSG
EQVTLEADISDSGSGFNLEQLPDPTFEGFLLRSSGRGLYIIRSIAEIVGVEVSDGRSTLKLRYTPY

Sequences:

>Translated_146_residues
MDFHCLPMNVCSLLLKSRSAEYEVLRTVLRTFGEIEGYSKGFLFSLELSMKEAFVNAVSHGNMSREELFVEFVMRADSSG
EQVTLEADISDSGSGFNLEQLPDPTFEGFLLRSSGRGLYIIRSIAEIVGVEVSDGRSTLKLRYTPY
>Mature_146_residues
MDFHCLPMNVCSLLLKSRSAEYEVLRTVLRTFGEIEGYSKGFLFSLELSMKEAFVNAVSHGNMSREELFVEFVMRADSSG
EQVTLEADISDSGSGFNLEQLPDPTFEGFLLRSSGRGLYIIRSIAEIVGVEVSDGRSTLKLRYTPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16337; Mature: 16337

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFHCLPMNVCSLLLKSRSAEYEVLRTVLRTFGEIEGYSKGFLFSLELSMKEAFVNAVSH
CCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHC
GNMSREELFVEFVMRADSSGEQVTLEADISDSGSGFNLEQLPDPTFEGFLLRSSGRGLYI
CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCEEEECCCCCEEH
IRSIAEIVGVEVSDGRSTLKLRYTPY
HHHHHHHHCCEECCCCCEEEEEECCC
>Mature Secondary Structure
MDFHCLPMNVCSLLLKSRSAEYEVLRTVLRTFGEIEGYSKGFLFSLELSMKEAFVNAVSH
CCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHC
GNMSREELFVEFVMRADSSGEQVTLEADISDSGSGFNLEQLPDPTFEGFLLRSSGRGLYI
CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCEEEECCCCCEEH
IRSIAEIVGVEVSDGRSTLKLRYTPY
HHHHHHHHCCEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA