Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is aroG [H]
Identifier: 119356911
GI number: 119356911
Start: 1234985
End: 1236049
Strand: Direct
Name: aroG [H]
Synonym: Cpha266_1090
Alternate gene names: 119356911
Gene position: 1234985-1236049 (Clockwise)
Preceding gene: 119356909
Following gene: 119356912
Centisome position: 39.41
GC content: 47.23
Gene sequence:
>1065_bases ATGGAACAGTTACACGATTTAAGAGTATCACGAATTAAACGTCTTCCCTCGCCAAGAGCCCTTAAGGAGCAACTTCCTGT TAAGGAGAGCACCGCTCGAACAGTAAGTTCCGGACGTCGTGATGTTGAAAATATTCTGACCGGTAAAGATGGACGCTTTC TGGTTATTGTAGGGCCTTGTTCAATACACGACGTGGATGCTGCTCGTGAATATGCCGAAAGACTTTCAATACTTCGTGAA GAGCTAAAGGATGAGCTTTGTATCATGATGAGGGTCTATTTTGAAAAACCGCGAACAACGGTTGGCTGGAAAGGATTTAT CAATGATCCCCATCTTGACGATTCTTATGATATTGAGCACGGGCTGTTTTATGCCCGTCAGCTTCTGCTTTCCATCAACA CGCTTGGGCTTCCGGCAGCAACGGAATTTCTTGATCCGATTACACCGCAATATGTCGCAGATGTGGTTAGCTGGGCAGCA ATAGGAGCAAGAACCATAGAGTCGCAGACACATCGACAGATGGCCAGCGGACTCTCTATGCCTGTCGGTTTTAAGAATTC AACCGACGGAAGATTGAATGTCGCTGTTGACGCCATTCGTTCTGCGATGCACCCGCACAGTTTTCTCGGTATTGATCAGG ATGGGCAGAGCAGTGTTATTACCACAAAAGGTAATCCTTACGGTCATCTTGTACTCAGGGGTGGAGAGCAACCAAACTAT GACGCCAAAAGCATCGCCCAGGCGGAAACGATGCTTGAAAAAGCCGGTCTTGAGCAGTCTCTGCTTGTGGATTGCAGCCA CGCGAATTCCGGTAAAAAACATGAGCAGCAGTTGTCGGTCTGGGGAGATGTTCTGCTTCAGAAAACTCAAGGAAATAAAA GCATTGTCGGAGTTATGATTGAAAGTAATCTCTGTGCCGGAAATCAGCCTTTTCCCGAAGATCCGGGTAAGCTCCGTTAC GGGGTGTCAATTACCGATGAGTGTGTTTCATGGGGGGAAACCGAGAGAATGCTGCGAGAGGGAGCTGCCATTATAGGTCA ATTGCTTTCGAAAAAACAGCAATGA
Upstream 100 bases:
>100_bases GATTCATTAGAATTTATTGTTCCGGTTACGCCTTATATATGATGGTTTTTTTTATCTTCTTTGCATCAGATTTTAATGAA GAGATTTTTGCAGTATACGA
Downstream 100 bases:
>100_bases TGATTTTTTAATTCTTTAAACCAGTATATCATGAATATTGATCGCCTCGTTTTTGCTATAGCCGGCTGTTTTGTGCTGGC AAGTGTTCTGTTGTCCATCT
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MEQLHDLRVSRIKRLPSPRALKEQLPVKESTARTVSSGRRDVENILTGKDGRFLVIVGPCSIHDVDAAREYAERLSILRE ELKDELCIMMRVYFEKPRTTVGWKGFINDPHLDDSYDIEHGLFYARQLLLSINTLGLPAATEFLDPITPQYVADVVSWAA IGARTIESQTHRQMASGLSMPVGFKNSTDGRLNVAVDAIRSAMHPHSFLGIDQDGQSSVITTKGNPYGHLVLRGGEQPNY DAKSIAQAETMLEKAGLEQSLLVDCSHANSGKKHEQQLSVWGDVLLQKTQGNKSIVGVMIESNLCAGNQPFPEDPGKLRY GVSITDECVSWGETERMLREGAAIIGQLLSKKQQ
Sequences:
>Translated_354_residues MEQLHDLRVSRIKRLPSPRALKEQLPVKESTARTVSSGRRDVENILTGKDGRFLVIVGPCSIHDVDAAREYAERLSILRE ELKDELCIMMRVYFEKPRTTVGWKGFINDPHLDDSYDIEHGLFYARQLLLSINTLGLPAATEFLDPITPQYVADVVSWAA IGARTIESQTHRQMASGLSMPVGFKNSTDGRLNVAVDAIRSAMHPHSFLGIDQDGQSSVITTKGNPYGHLVLRGGEQPNY DAKSIAQAETMLEKAGLEQSLLVDCSHANSGKKHEQQLSVWGDVLLQKTQGNKSIVGVMIESNLCAGNQPFPEDPGKLRY GVSITDECVSWGETERMLREGAAIIGQLLSKKQQ >Mature_354_residues MEQLHDLRVSRIKRLPSPRALKEQLPVKESTARTVSSGRRDVENILTGKDGRFLVIVGPCSIHDVDAAREYAERLSILRE ELKDELCIMMRVYFEKPRTTVGWKGFINDPHLDDSYDIEHGLFYARQLLLSINTLGLPAATEFLDPITPQYVADVVSWAA IGARTIESQTHRQMASGLSMPVGFKNSTDGRLNVAVDAIRSAMHPHSFLGIDQDGQSSVITTKGNPYGHLVLRGGEQPNY DAKSIAQAETMLEKAGLEQSLLVDCSHANSGKKHEQQLSVWGDVLLQKTQGNKSIVGVMIESNLCAGNQPFPEDPGKLRY GVSITDECVSWGETERMLREGAAIIGQLLSKKQQ
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=338, Percent_Identity=56.8047337278106, Blast_Score=395, Evalue=1e-111, Organism=Escherichia coli, GI1788953, Length=339, Percent_Identity=52.212389380531, Blast_Score=386, Evalue=1e-108, Organism=Escherichia coli, GI1787996, Length=345, Percent_Identity=51.304347826087, Blast_Score=358, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6319726, Length=344, Percent_Identity=52.0348837209302, Blast_Score=357, Evalue=1e-99, Organism=Saccharomyces cerevisiae, GI6320240, Length=344, Percent_Identity=44.4767441860465, Blast_Score=314, Evalue=1e-86,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 39163; Mature: 39163
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQLHDLRVSRIKRLPSPRALKEQLPVKESTARTVSSGRRDVENILTGKDGRFLVIVGPC CCHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC SIHDVDAAREYAERLSILREELKDELCIMMRVYFEKPRTTVGWKGFINDPHLDDSYDIEH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH GLFYARQLLLSINTLGLPAATEFLDPITPQYVADVVSWAAIGARTIESQTHRQMASGLSM HHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVGFKNSTDGRLNVAVDAIRSAMHPHSFLGIDQDGQSSVITTKGNPYGHLVLRGGEQPNY CCCCCCCCCCEEHHHHHHHHHHCCCCCEECCCCCCCCCEEEECCCCEEEEEEECCCCCCC DAKSIAQAETMLEKAGLEQSLLVDCSHANSGKKHEQQLSVWGDVLLQKTQGNKSIVGVMI CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE ESNLCAGNQPFPEDPGKLRYGVSITDECVSWGETERMLREGAAIIGQLLSKKQQ ECCCCCCCCCCCCCCCCEEECCEECHHHHCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEQLHDLRVSRIKRLPSPRALKEQLPVKESTARTVSSGRRDVENILTGKDGRFLVIVGPC CCHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC SIHDVDAAREYAERLSILREELKDELCIMMRVYFEKPRTTVGWKGFINDPHLDDSYDIEH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH GLFYARQLLLSINTLGLPAATEFLDPITPQYVADVVSWAAIGARTIESQTHRQMASGLSM HHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVGFKNSTDGRLNVAVDAIRSAMHPHSFLGIDQDGQSSVITTKGNPYGHLVLRGGEQPNY CCCCCCCCCCEEHHHHHHHHHHCCCCCEECCCCCCCCCEEEECCCCEEEEEEECCCCCCC DAKSIAQAETMLEKAGLEQSLLVDCSHANSGKKHEQQLSVWGDVLLQKTQGNKSIVGVMI CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE ESNLCAGNQPFPEDPGKLRYGVSITDECVSWGETERMLREGAAIIGQLLSKKQQ ECCCCCCCCCCCCCCCCEEECCEECHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]