Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
---|---|
Accession | NC_008639 |
Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356909
Identifier: 119356909
GI number: 119356909
Start: 1231774
End: 1232961
Strand: Direct
Name: 119356909
Synonym: Cpha266_1088
Alternate gene names: NA
Gene position: 1231774-1232961 (Clockwise)
Preceding gene: 119356908
Following gene: 119356911
Centisome position: 39.3
GC content: 44.61
Gene sequence:
>1188_bases ATGCGTAATATCATTTTTACCGGAAAGGGAGGCGTCGGCAAAACCTCTGTAGCTGCCGCAACAGCACTGAGGGCGGCAGA AATGGGTTATAAGACCCTTATAATGTCTACTGATCCGGCGCACAGTCTGGGTGACTCGCTTGATGTTCAGTTAGGCCCAT CTCCAGTCAAGGTTGCTGAAAATCTCTGGGGCCAGGAGGTCAGTGTTTTCGGTGATCTTAATCTTAACTGGGATGTAGTC AGGGAGCATTTTGCGCATTTGATGGCATCTCGCGGTATCGAGGGTGTGTATGCAGAGGAAATGGGCGTTCTTCCTGGTAT GGAAGAGCTCTTTTCGCTCTCCTATATCAAACGGTACAATGAAGGAAATCAGGATTACGATCTTCTTGTCGTCGATTGTG CTCCTACCGGCGAAACGCTTCGTCTGCTTTCGCTTCCGGAAACCTTCGGATGGTTTATCAAGTTTATCCGTAATGTCGAA AAGTATATGGTGAAACCGGTTATCAGACCGCTTTCAAAGAAAATCAAGAAAATTGATGATTTTGTCGCTCCTGAAGAGGT CTATGAAAAGGTTGATAATCTTTTCTCTTCCACGGAAGGCATTATTGATCTTCTTGCAGATGGCACGAAATCCACGGTGC GTCTTGTCATGAACCCCGAGAAGATGGTTATCAAAGAGTCCATGCGCGCGTTAACCTATCTCAATCTCTATGGAATAACC GTTGACAGTATTACCATCAACAGGATTATGCCCGATCATACCGAGGATCCTTACTTTAAAAAATGGAGAGCTATTCAGCA GAAGTATATTGAGCAGATTAAAGGAGCATTTTCTCCGATTCCGATTGCTGAAGTGCCTTTGTTTGATGAAGAGGTTGTTG GTCTCGATATGCTTCGCAAGGTTGGAGAAAAGGTTTATGCGGGTAAAAATCCGCTTGACATTTTCTTCAAGGAAGATCCT ATTGATATCAAGAAGGTTGCTGATGGACACTATAAGGTACGCGTAAGGCTTCCATTCATGGAAACAATGGGTATGGAACC AAAGATTCTTAAACTGGGTGATGATTTGACCATTCGCATCGGCGATTATCAGAAAATCGTTGCCTTGCCGATTTTCCTTG CCGGTCTTGAATCAACGGGCGCCACGTTTGAAGAAAAATGGCTGAGCATTGACTTTACAAAGCCATGA
Upstream 100 bases:
>100_bases AATTATCTTAAGCCTTTTCTGGCTGCTTCATCTGACGGAAAATAAAGGTTGTTTATAATCGCTTTTTCAATAATTCCTTA AATGAGAATCGTTAACACGT
Downstream 100 bases:
>100_bases TGATTTTCAGATAAACGGATCTGTTTCTTTTATACAAAAAAACCTGCCTGAAAAGGCAGGTTTTTTTGTGTGGCCAGAAT ATGCGCTTACAGAGAGAGAA
Product: arsenite-activated ATPase ArsA
Products: NA
Alternate protein names: Arsenical resistance ATPase; Arsenite-translocating ATPase; Arsenite-transporting ATPase [H]
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MRNIIFTGKGGVGKTSVAAATALRAAEMGYKTLIMSTDPAHSLGDSLDVQLGPSPVKVAENLWGQEVSVFGDLNLNWDVV REHFAHLMASRGIEGVYAEEMGVLPGMEELFSLSYIKRYNEGNQDYDLLVVDCAPTGETLRLLSLPETFGWFIKFIRNVE KYMVKPVIRPLSKKIKKIDDFVAPEEVYEKVDNLFSSTEGIIDLLADGTKSTVRLVMNPEKMVIKESMRALTYLNLYGIT VDSITINRIMPDHTEDPYFKKWRAIQQKYIEQIKGAFSPIPIAEVPLFDEEVVGLDMLRKVGEKVYAGKNPLDIFFKEDP IDIKKVADGHYKVRVRLPFMETMGMEPKILKLGDDLTIRIGDYQKIVALPIFLAGLESTGATFEEKWLSIDFTKP
Sequences:
>Translated_395_residues MRNIIFTGKGGVGKTSVAAATALRAAEMGYKTLIMSTDPAHSLGDSLDVQLGPSPVKVAENLWGQEVSVFGDLNLNWDVV REHFAHLMASRGIEGVYAEEMGVLPGMEELFSLSYIKRYNEGNQDYDLLVVDCAPTGETLRLLSLPETFGWFIKFIRNVE KYMVKPVIRPLSKKIKKIDDFVAPEEVYEKVDNLFSSTEGIIDLLADGTKSTVRLVMNPEKMVIKESMRALTYLNLYGIT VDSITINRIMPDHTEDPYFKKWRAIQQKYIEQIKGAFSPIPIAEVPLFDEEVVGLDMLRKVGEKVYAGKNPLDIFFKEDP IDIKKVADGHYKVRVRLPFMETMGMEPKILKLGDDLTIRIGDYQKIVALPIFLAGLESTGATFEEKWLSIDFTKP >Mature_395_residues MRNIIFTGKGGVGKTSVAAATALRAAEMGYKTLIMSTDPAHSLGDSLDVQLGPSPVKVAENLWGQEVSVFGDLNLNWDVV REHFAHLMASRGIEGVYAEEMGVLPGMEELFSLSYIKRYNEGNQDYDLLVVDCAPTGETLRLLSLPETFGWFIKFIRNVE KYMVKPVIRPLSKKIKKIDDFVAPEEVYEKVDNLFSSTEGIIDLLADGTKSTVRLVMNPEKMVIKESMRALTYLNLYGIT VDSITINRIMPDHTEDPYFKKWRAIQQKYIEQIKGAFSPIPIAEVPLFDEEVVGLDMLRKVGEKVYAGKNPLDIFFKEDP IDIKKVADGHYKVRVRLPFMETMGMEPKILKLGDDLTIRIGDYQKIVALPIFLAGLESTGATFEEKWLSIDFTKP
Specific function: Anion-transporting ATPase. Catalyzes the extrusion of arsenite [H]
COG id: COG0003
COG function: function code P; Oxyanion-translocating ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arsA ATPase family [H]
Homologues:
Organism=Homo sapiens, GI50428938, Length=286, Percent_Identity=25.1748251748252, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17557003, Length=317, Percent_Identity=23.9747634069401, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320103, Length=325, Percent_Identity=25.8461538461538, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI24586297, Length=305, Percent_Identity=25.5737704918033, Blast_Score=103, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003348 [H]
Pfam domain/function: NA
EC number: =3.6.3.16 [H]
Molecular weight: Translated: 44487; Mature: 44487
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNIIFTGKGGVGKTSVAAATALRAAEMGYKTLIMSTDPAHSLGDSLDVQLGPSPVKVAE CCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHCCCCCEEEECCCHHHHHH NLWGQEVSVFGDLNLNWDVVREHFAHLMASRGIEGVYAEEMGVLPGMEELFSLSYIKRYN HCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHC EGNQDYDLLVVDCAPTGETLRLLSLPETFGWFIKFIRNVEKYMVKPVIRPLSKKIKKIDD CCCCCEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVAPEEVYEKVDNLFSSTEGIIDLLADGTKSTVRLVMNPEKMVIKESMRALTYLNLYGIT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEEE VDSITINRIMPDHTEDPYFKKWRAIQQKYIEQIKGAFSPIPIAEVPLFDEEVVGLDMLRK EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH VGEKVYAGKNPLDIFFKEDPIDIKKVADGHYKVRVRLPFMETMGMEPKILKLGDDLTIRI HHHHHHCCCCCEEEEECCCCCCHHHHCCCCEEEEEEECHHHHCCCCCEEEEECCCEEEEE GDYQKIVALPIFLAGLESTGATFEEKWLSIDFTKP CCHHHHHHHHHHHHCCCCCCCCHHHCEEEEECCCC >Mature Secondary Structure MRNIIFTGKGGVGKTSVAAATALRAAEMGYKTLIMSTDPAHSLGDSLDVQLGPSPVKVAE CCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHCCCCCEEEECCCHHHHHH NLWGQEVSVFGDLNLNWDVVREHFAHLMASRGIEGVYAEEMGVLPGMEELFSLSYIKRYN HCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHC EGNQDYDLLVVDCAPTGETLRLLSLPETFGWFIKFIRNVEKYMVKPVIRPLSKKIKKIDD CCCCCEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVAPEEVYEKVDNLFSSTEGIIDLLADGTKSTVRLVMNPEKMVIKESMRALTYLNLYGIT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEEE VDSITINRIMPDHTEDPYFKKWRAIQQKYIEQIKGAFSPIPIAEVPLFDEEVVGLDMLRK EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH VGEKVYAGKNPLDIFFKEDPIDIKKVADGHYKVRVRLPFMETMGMEPKILKLGDDLTIRI HHHHHHCCCCCEEEEECCCCCCHHHHCCCCEEEEEEECHHHHCCCCCEEEEECCCEEEEE GDYQKIVALPIFLAGLESTGATFEEKWLSIDFTKP CCHHHHHHHHHHHHCCCCCCCCHHHCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]