Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119356883
Identifier: 119356883
GI number: 119356883
Start: 1200434
End: 1201000
Strand: Direct
Name: 119356883
Synonym: Cpha266_1061
Alternate gene names: NA
Gene position: 1200434-1201000 (Clockwise)
Preceding gene: 119356880
Following gene: 119356884
Centisome position: 38.3
GC content: 47.44
Gene sequence:
>567_bases ATGAAGGATATGCAAGCTCCTTTTTCATGGATTCGTGCAGAACGCCAGAAAATACTCTTTAATGTATTTGCTGCAATCTC GGTTCTGCTTATGGCCGTGCTTTACCATATCGGAAAGCCGCTCGTTATTCCGGAACAGGGTGTTTCGTTCGGCATTGTCG ACATGGAGTTGCCGGTAACGTTTTTACGTGCGGATTCGATCCTGTCTGTATGGGAACGTCATGGAGTTGTGGAGCTGGGC GTGCGGCAGACTTTGCTGGATTTTCTGTTTCTCATGCTCTATCCTGTGGCGTTGAGCCTGCTTTGCATGAGGCTTGCCAA AAGAAGGTTCGGGTTTATGGCATCTCTTGGCATTGCTCTCTCCTGGGTCGTTCTTCTCTGCATTCCGTTTGACGCATGCG AGAATATCCTGATTCTGAAGATGCTTGGCGGCAACACTTCGTCGCCTTATCCTGAGTTTACCACAATCATGGCCGTAATG AAATTCAGTCTGATCGGTTGTTCGCTGATCGGTTATCCTTTTCTTTGTCTGTTTCAGAAGCTTTTGAAAAGCTGCAAGAC CTGTTGA
Upstream 100 bases:
>100_bases TGAAAGGCATGTTCATTTGATACAGTTACTGATTAACCGCTTCTTTTTTCAGGATTCTATCACAAGCCGGTTACCTCATT TTTCAACTTTCTCATGACGA
Downstream 100 bases:
>100_bases AAAATGTTTTTAAGTCGTTCTGCAGCGGCATCATCGCTGCTGGTGGCTTGATATGGTTTTTACTCGACTTATAAGGCTGA AAGCCTAAACGTGCTGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKDMQAPFSWIRAERQKILFNVFAAISVLLMAVLYHIGKPLVIPEQGVSFGIVDMELPVTFLRADSILSVWERHGVVELG VRQTLLDFLFLMLYPVALSLLCMRLAKRRFGFMASLGIALSWVVLLCIPFDACENILILKMLGGNTSSPYPEFTTIMAVM KFSLIGCSLIGYPFLCLFQKLLKSCKTC
Sequences:
>Translated_188_residues MKDMQAPFSWIRAERQKILFNVFAAISVLLMAVLYHIGKPLVIPEQGVSFGIVDMELPVTFLRADSILSVWERHGVVELG VRQTLLDFLFLMLYPVALSLLCMRLAKRRFGFMASLGIALSWVVLLCIPFDACENILILKMLGGNTSSPYPEFTTIMAVM KFSLIGCSLIGYPFLCLFQKLLKSCKTC >Mature_188_residues MKDMQAPFSWIRAERQKILFNVFAAISVLLMAVLYHIGKPLVIPEQGVSFGIVDMELPVTFLRADSILSVWERHGVVELG VRQTLLDFLFLMLYPVALSLLCMRLAKRRFGFMASLGIALSWVVLLCIPFDACENILILKMLGGNTSSPYPEFTTIMAVM KFSLIGCSLIGYPFLCLFQKLLKSCKTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21136; Mature: 21136
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDMQAPFSWIRAERQKILFNVFAAISVLLMAVLYHIGKPLVIPEQGVSFGIVDMELPVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEHHHHHH FLRADSILSVWERHGVVELGVRQTLLDFLFLMLYPVALSLLCMRLAKRRFGFMASLGIAL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SWVVLLCIPFDACENILILKMLGGNTSSPYPEFTTIMAVMKFSLIGCSLIGYPFLCLFQK HHHHHHHHCHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKSCKTC HHHHHCCC >Mature Secondary Structure MKDMQAPFSWIRAERQKILFNVFAAISVLLMAVLYHIGKPLVIPEQGVSFGIVDMELPVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEHHHHHH FLRADSILSVWERHGVVELGVRQTLLDFLFLMLYPVALSLLCMRLAKRRFGFMASLGIAL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SWVVLLCIPFDACENILILKMLGGNTSSPYPEFTTIMAVMKFSLIGCSLIGYPFLCLFQK HHHHHHHHCHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKSCKTC HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA