BacMap

Definition	Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession	NC_008639
Length	3,133,902

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The map label for this gene is fabG [H]

Identifier: 119356877

GI number: 119356877

Start: 1189384

End: 1190142

Strand: Direct

Name: fabG [H]

Synonym: Cpha266_1050

Alternate gene names: 119356877

Gene position: 1189384-1190142 (Clockwise)

Preceding gene: 119356876

Following gene: 119356878

Centisome position: 37.95

GC content: 52.7

Gene sequence:

>759_bases
ATGCGCCTCAGGAACAAAACCGCTCTGGTAACCGGAGCCGCCGGTGGCATAGGCAGCGCAACGGCAGTATGTTTTGCCAG
AGAGGGCGCGTTTGTCGTTCTCAGCGATATTCGCGAAGAAGGCTGTTTGCAGGTTCTTGATACGATCAGGGTTGCAGGAG
GCGATGGTGCGGTTATTCCGGCAGAGATGACCAGCGAAAAGGATATCGTGTCGCTTTTTCAACAAACTGCGAGCCTGAAA
GGACGGCTTGACATTCTTGCTGCCATAGCCGGAGGTGATGTTGAGCCGGCAGCTTTGCCTGAGACGATCGATGGAGATAA
ACTCAGCCTTAATCTCGATCTGAATCTCAAATCATGTATGCTTTGCTGTCGTGAGGCGGTAAAGATCATGAAACCGCAGC
AGTATGGACGGATCGTGACCATGAGTTCACTGGTTTATCGCGGAAGTCCCAATCAGTTTTCCTACGCTGCGTCGAAAGGC
GGGATCCATGCATTCAGCCGGTCACTCGCTATGGCACTCGGCAGTTACAATATTACTGTCAATGCCCTTGCACCTGCACT
GGTCGAGGTTCCAGCCTTTATACAGGCGCTTGGACGTGAGCGTTGGGAAGCGCTGAAGCGCGATTGTGCAATGCGCTACC
CTTTACAACGGATAGCTCAGCCCGGTGATGTTGCTCTTTGCGCACTGTTTCTCGCTTCGGATGATGCATCGTTCATTACC
GGCCAGATTCTTGAAATCTCCGGAGGCGCAAGGCTTTAA

Upstream 100 bases:

>100_bases
TTTTTGCTAATAATAATGACAGAGTGGTGAATTCCCGAGTGCTTTCGACTCCGGAATGAGTTGCTCCGGCTTGTATTGAT
GAACCATCTATAAAAGGATC

Downstream 100 bases:

>100_bases
GATCATTGTTCAGACAAATACTCTTGTTGCCGGTTTTGCCCCTTTGGTCTCTCATAGCTTAGTCAACTCTTAAACATGAT
CGCCATGGACCCGATTTGCA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MRLRNKTALVTGAAGGIGSATAVCFAREGAFVVLSDIREEGCLQVLDTIRVAGGDGAVIPAEMTSEKDIVSLFQQTASLK
GRLDILAAIAGGDVEPAALPETIDGDKLSLNLDLNLKSCMLCCREAVKIMKPQQYGRIVTMSSLVYRGSPNQFSYAASKG
GIHAFSRSLAMALGSYNITVNALAPALVEVPAFIQALGRERWEALKRDCAMRYPLQRIAQPGDVALCALFLASDDASFIT
GQILEISGGARL

Sequences:

>Translated_252_residues
MRLRNKTALVTGAAGGIGSATAVCFAREGAFVVLSDIREEGCLQVLDTIRVAGGDGAVIPAEMTSEKDIVSLFQQTASLK
GRLDILAAIAGGDVEPAALPETIDGDKLSLNLDLNLKSCMLCCREAVKIMKPQQYGRIVTMSSLVYRGSPNQFSYAASKG
GIHAFSRSLAMALGSYNITVNALAPALVEVPAFIQALGRERWEALKRDCAMRYPLQRIAQPGDVALCALFLASDDASFIT
GQILEISGGARL
>Mature_252_residues
MRLRNKTALVTGAAGGIGSATAVCFAREGAFVVLSDIREEGCLQVLDTIRVAGGDGAVIPAEMTSEKDIVSLFQQTASLK
GRLDILAAIAGGDVEPAALPETIDGDKLSLNLDLNLKSCMLCCREAVKIMKPQQYGRIVTMSSLVYRGSPNQFSYAASKG
GIHAFSRSLAMALGSYNITVNALAPALVEVPAFIQALGRERWEALKRDCAMRYPLQRIAQPGDVALCALFLASDDASFIT
GQILEISGGARL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=30, Blast_Score=98, Evalue=6e-21,
Organism=Homo sapiens, GI40254992, Length=249, Percent_Identity=32.1285140562249, Blast_Score=98, Evalue=9e-21,
Organism=Homo sapiens, GI15277342, Length=262, Percent_Identity=29.3893129770992, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=29.2490118577075, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI59889578, Length=232, Percent_Identity=31.8965517241379, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI66933014, Length=257, Percent_Identity=32.295719844358, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=26.0700389105058, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI10190704, Length=256, Percent_Identity=29.6875, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI5031737, Length=252, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI109715829, Length=258, Percent_Identity=27.906976744186, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI4504505, Length=196, Percent_Identity=30.6122448979592, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1789378, Length=255, Percent_Identity=30.9803921568627, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1787335, Length=250, Percent_Identity=31.6, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787905, Length=251, Percent_Identity=33.8645418326693, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=31.5175097276265, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI2367175, Length=252, Percent_Identity=32.5396825396825, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI87082160, Length=253, Percent_Identity=28.8537549407115, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=30.078125, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1790717, Length=250, Percent_Identity=26, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=28, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1788459, Length=250, Percent_Identity=24, Blast_Score=69, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=271, Percent_Identity=29.8892988929889, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17560676, Length=250, Percent_Identity=30.8, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17560220, Length=273, Percent_Identity=29.6703296703297, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17559104, Length=269, Percent_Identity=30.1115241635688, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17562910, Length=273, Percent_Identity=29.3040293040293, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=30.5660377358491, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17555706, Length=250, Percent_Identity=28, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17562906, Length=268, Percent_Identity=30.2238805970149, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=27.7153558052434, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=28.4644194756554, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17561402, Length=259, Percent_Identity=30.1158301158301, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=29.1666666666667, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI25147288, Length=250, Percent_Identity=28, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=28.7313432835821, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI115534694, Length=258, Percent_Identity=31.0077519379845, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=273, Percent_Identity=29.3040293040293, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17544670, Length=274, Percent_Identity=29.1970802919708, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=28.6852589641434, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=257, Percent_Identity=26.4591439688716, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=272, Percent_Identity=26.4705882352941, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=28.7937743190661, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=254, Percent_Identity=27.1653543307087, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI72000259, Length=270, Percent_Identity=27.037037037037, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=25.6916996047431, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17568967, Length=197, Percent_Identity=32.48730964467, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562990, Length=275, Percent_Identity=27.6363636363636, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17563726, Length=273, Percent_Identity=26.3736263736264, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17565030, Length=268, Percent_Identity=28.7313432835821, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=221, Percent_Identity=28.9592760180996, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324126, Length=258, Percent_Identity=23.6434108527132, Blast_Score=69, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28571526, Length=258, Percent_Identity=30.6201550387597, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24644339, Length=259, Percent_Identity=31.2741312741313, Blast_Score=94, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24639444, Length=256, Percent_Identity=30.078125, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=29.6442687747036, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI21355319, Length=256, Percent_Identity=29.6875, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21357041, Length=258, Percent_Identity=27.906976744186, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24644337, Length=252, Percent_Identity=29.7619047619048, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI18859837, Length=196, Percent_Identity=32.6530612244898, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI17737361, Length=266, Percent_Identity=27.0676691729323, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26683; Mature: 26683

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRNKTALVTGAAGGIGSATAVCFAREGAFVVLSDIREEGCLQVLDTIRVAGGDGAVIP
CCCCCCEEEEEECCCCCCCHHEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEC
AEMTSEKDIVSLFQQTASLKGRLDILAAIAGGDVEPAALPETIDGDKLSLNLDLNLKSCM
HHCCCCHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
LCCREAVKIMKPQQYGRIVTMSSLVYRGSPNQFSYAASKGGIHAFSRSLAMALGSYNITV
HHHHHHHHHHCCHHHCCEEEEHHEEECCCCCCEEEHHCCCCHHHHHHHHHHHHCCCCEEE
NALAPALVEVPAFIQALGRERWEALKRDCAMRYPLQRIAQPGDVALCALFLASDDASFIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCCCE
GQILEISGGARL
EEEEEECCCCCC
>Mature Secondary Structure
MRLRNKTALVTGAAGGIGSATAVCFAREGAFVVLSDIREEGCLQVLDTIRVAGGDGAVIP
CCCCCCEEEEEECCCCCCCHHEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEC
AEMTSEKDIVSLFQQTASLKGRLDILAAIAGGDVEPAALPETIDGDKLSLNLDLNLKSCM
HHCCCCHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
LCCREAVKIMKPQQYGRIVTMSSLVYRGSPNQFSYAASKGGIHAFSRSLAMALGSYNITV
HHHHHHHHHHCCHHHCCEEEEHHEEECCCCCCEEEHHCCCCHHHHHHHHHHHHCCCCEEE
NALAPALVEVPAFIQALGRERWEALKRDCAMRYPLQRIAQPGDVALCALFLASDDASFIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCCCE
GQILEISGGARL
EEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]