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The map label for this gene is yibD [C]

Identifier: 119356876

GI number: 119356876

Start: 1188455

End: 1189342

Strand: Direct

Name: yibD [C]

Synonym: Cpha266_1049

Alternate gene names: 119356876

Gene position: 1188455-1189342 (Clockwise)

Preceding gene: 119356875

Following gene: 119356877

Centisome position: 37.92

GC content: 45.83

Gene sequence:

>888_bases
ATGTTCATGAGGGGAAGTATAAACAGACCGATGGTGACGGTAACCATTCCGTTATATAACAACGTTCGCTTTATCGCCCA
GACAATAGATTCAGTGCTGGCACAGACCTTTACTGATTTTGAATTGCTGATTTACGATGACCATTCGACGGATGGTTCAT
TTGAAATTGCGGCATCATACAGCGACAGGCGAATCAGGCTGGTTCGCAATCCGGTAAATCTTGGACCTGAAAGGAACTGG
AACAAGGCGATAGGCGAAGTCAGGGGGAAATATGTAAAGCTGGTGTGCGGTGACGATATTCTTTATCCCGACTGTCTTGA
AAAGCAGGTGGCGGTTTTTGACGATCCTCTCAATACAGGCTTGAGCCTTGTTTGCGGCCAGAGAACCATTATTGATCCTG
AAGGCAAGCCGCTTATCAAAAAGGTGAACTTTGTTAATGGCGGACGCAAGGATGCTGTTGAAGTGGTAAGAAAAATGATA
AGAATGGGTACCAATATTATCGGAGAACCGGTTTGCGGTCTTTATCCGGCTGAACTGATCAGCAGGATCAGCGGGTACTC
CGCAGTTGTGCCTTATACCATTGACCTGGATTTCTGGCTTCAGCTTCTCAGGCTTGGTGATCTATATGTGATCGATGAAG
CTCTCTGTGCCTTTCGGATTTCGAATCAATCCTGGTCGTCAAGGATCGGTGAAATGCGTTATCAGCAGTTTCTTGAGTTT
ATGGAGCTTGCCGCCGCAGATAAACGGCATGAAGTTACCGATCTTGACCTGTTTATCGGAAAAATCAACTGCGCCATTCA
GTCGATGACCAGTCTTATGGGGTTCAAACTTTTTGCTAATAATAATGACAGAGTGGTGAATTCCCGAGTGCTTTCGACTC
CGGAATGA

Upstream 100 bases:

>100_bases
TGATTCAGGTAAACATGCTACGTCTGAATGGGCTGTTCGCTTTGGCGTTACATTTGCAGAAGAGAAGTGATCTATCAAGT
TTTTGATGTATGAGGGAGAG

Downstream 100 bases:

>100_bases
GTTGCTCCGGCTTGTATTGATGAACCATCTATAAAAGGATCATGCGCCTCAGGAACAAAACCGCTCTGGTAACCGGAGCC
GCCGGTGGCATAGGCAGCGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MFMRGSINRPMVTVTIPLYNNVRFIAQTIDSVLAQTFTDFELLIYDDHSTDGSFEIAASYSDRRIRLVRNPVNLGPERNW
NKAIGEVRGKYVKLVCGDDILYPDCLEKQVAVFDDPLNTGLSLVCGQRTIIDPEGKPLIKKVNFVNGGRKDAVEVVRKMI
RMGTNIIGEPVCGLYPAELISRISGYSAVVPYTIDLDFWLQLLRLGDLYVIDEALCAFRISNQSWSSRIGEMRYQQFLEF
MELAAADKRHEVTDLDLFIGKINCAIQSMTSLMGFKLFANNNDRVVNSRVLSTPE

Sequences:

>Translated_295_residues
MFMRGSINRPMVTVTIPLYNNVRFIAQTIDSVLAQTFTDFELLIYDDHSTDGSFEIAASYSDRRIRLVRNPVNLGPERNW
NKAIGEVRGKYVKLVCGDDILYPDCLEKQVAVFDDPLNTGLSLVCGQRTIIDPEGKPLIKKVNFVNGGRKDAVEVVRKMI
RMGTNIIGEPVCGLYPAELISRISGYSAVVPYTIDLDFWLQLLRLGDLYVIDEALCAFRISNQSWSSRIGEMRYQQFLEF
MELAAADKRHEVTDLDLFIGKINCAIQSMTSLMGFKLFANNNDRVVNSRVLSTPE
>Mature_295_residues
MFMRGSINRPMVTVTIPLYNNVRFIAQTIDSVLAQTFTDFELLIYDDHSTDGSFEIAASYSDRRIRLVRNPVNLGPERNW
NKAIGEVRGKYVKLVCGDDILYPDCLEKQVAVFDDPLNTGLSLVCGQRTIIDPEGKPLIKKVNFVNGGRKDAVEVVRKMI
RMGTNIIGEPVCGLYPAELISRISGYSAVVPYTIDLDFWLQLLRLGDLYVIDEALCAFRISNQSWSSRIGEMRYQQFLEF
MELAAADKRHEVTDLDLFIGKINCAIQSMTSLMGFKLFANNNDRVVNSRVLSTPE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=117, Percent_Identity=36.7521367521368, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 33352; Mature: 33352

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS00850 GLY_RADICAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMRGSINRPMVTVTIPLYNNVRFIAQTIDSVLAQTFTDFELLIYDDHSTDGSFEIAASY
CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECC
SDRRIRLVRNPVNLGPERNWNKAIGEVRGKYVKLVCGDDILYPDCLEKQVAVFDDPLNTG
CCCEEEEEECCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCCHHCC
LSLVCGQRTIIDPEGKPLIKKVNFVNGGRKDAVEVVRKMIRMGTNIIGEPVCGLYPAELI
CEEEECCCEEECCCCCHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
SRISGYSAVVPYTIDLDFWLQLLRLGDLYVIDEALCAFRISNQSWSSRIGEMRYQQFLEF
HHHCCCCEEEEEEECHHHHHHHHHHCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH
MELAAADKRHEVTDLDLFIGKINCAIQSMTSLMGFKLFANNNDRVVNSRVLSTPE
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCCC
>Mature Secondary Structure
MFMRGSINRPMVTVTIPLYNNVRFIAQTIDSVLAQTFTDFELLIYDDHSTDGSFEIAASY
CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECC
SDRRIRLVRNPVNLGPERNWNKAIGEVRGKYVKLVCGDDILYPDCLEKQVAVFDDPLNTG
CCCEEEEEECCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCCHHCC
LSLVCGQRTIIDPEGKPLIKKVNFVNGGRKDAVEVVRKMIRMGTNIIGEPVCGLYPAELI
CEEEECCCEEECCCCCHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
SRISGYSAVVPYTIDLDFWLQLLRLGDLYVIDEALCAFRISNQSWSSRIGEMRYQQFLEF
HHHCCCCEEEEEEECHHHHHHHHHHCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH
MELAAADKRHEVTDLDLFIGKINCAIQSMTSLMGFKLFANNNDRVVNSRVLSTPE
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA