Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119356870
Identifier: 119356870
GI number: 119356870
Start: 1180237
End: 1180968
Strand: Direct
Name: 119356870
Synonym: Cpha266_1043
Alternate gene names: NA
Gene position: 1180237-1180968 (Clockwise)
Preceding gene: 119356869
Following gene: 119356871
Centisome position: 37.66
GC content: 45.22
Gene sequence:
>732_bases ATGGCAAAAATGTTCGGCAAGTTATTTGGCGATTCGCCAAAAACATCTGAAACCCCGCAGGCGTTTACGATCAAGATTGA TCCCTTGAAATTCAATCTCTCCATTAAACCTTCGGGGACTGTTCATGTTCAGCTTGAATCGCTCAAGCAGAAACTGACCA AGCTTTCATCCAACGTTGAAAACAACCTGATGCTGAGTATCAGGGCCTCAACCAAACAAAATGTCGATCTTGCCTCATCG GCATTCAAGTTTGATGAGGAGTATATCCAGAAAGGGAAGTTTGAGGTTGAGTATCTTACGCTTGCCTATCTGTCGTTTCA GCAGCTTGACGATGATCAGCTCGCCATTGTGAAAAACGCGCGCATGATTCTGCAGGAACTCGAAAGGCTGGCGCAATTCG CGCTTAATATTGCAGACAAGACCGGTCATGTTCAGTTCGCCAATGTTCAGGAGTTGCATAAGGACGAGTATGGTCTGAAG CCGATGGGAGACATTACTGCGGAGATGATCAAGAAAGCAGTCGAGGCATTTGTGAGCGGCAATGCAAAGCATGCAAGCGA AACCCTCGGCATGATGAAGGAGATCGATGAGCTTTATCAATCTGCGGTGAAAAAAATCAAGTCATCAGTAACCGACCAGA ATATCACCAATCTGACTGGCATTCTTTCCGTTATTGAACATGTCAAGGCTTCTGCGGATATTTCCTGTTCAATTGCAAAA AACTTCTGCTGA
Upstream 100 bases:
>100_bases TTTTTGTTTTTTAACTTGCATATAACCTCACTGCTCAGCTAAATTAGACAACACGTGATACATTCTGCATTTTATTAACA CAAGTGAGGTGTTGTACTCT
Downstream 100 bases:
>100_bases AGTTTTTTGTATCATGTATTCATGTGCTGTTTAGTATGAAAAAGGCGGGCCTTGTGCCCGCCTTTTTTTGTTTTTTAGCT GATAAAAGTCTGCAATAGAG
Product: phosphate uptake regulator, PhoU
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MAKMFGKLFGDSPKTSETPQAFTIKIDPLKFNLSIKPSGTVHVQLESLKQKLTKLSSNVENNLMLSIRASTKQNVDLASS AFKFDEEYIQKGKFEVEYLTLAYLSFQQLDDDQLAIVKNARMILQELERLAQFALNIADKTGHVQFANVQELHKDEYGLK PMGDITAEMIKKAVEAFVSGNAKHASETLGMMKEIDELYQSAVKKIKSSVTDQNITNLTGILSVIEHVKASADISCSIAK NFC
Sequences:
>Translated_243_residues MAKMFGKLFGDSPKTSETPQAFTIKIDPLKFNLSIKPSGTVHVQLESLKQKLTKLSSNVENNLMLSIRASTKQNVDLASS AFKFDEEYIQKGKFEVEYLTLAYLSFQQLDDDQLAIVKNARMILQELERLAQFALNIADKTGHVQFANVQELHKDEYGLK PMGDITAEMIKKAVEAFVSGNAKHASETLGMMKEIDELYQSAVKKIKSSVTDQNITNLTGILSVIEHVKASADISCSIAK NFC >Mature_242_residues AKMFGKLFGDSPKTSETPQAFTIKIDPLKFNLSIKPSGTVHVQLESLKQKLTKLSSNVENNLMLSIRASTKQNVDLASSA FKFDEEYIQKGKFEVEYLTLAYLSFQQLDDDQLAIVKNARMILQELERLAQFALNIADKTGHVQFANVQELHKDEYGLKP MGDITAEMIKKAVEAFVSGNAKHASETLGMMKEIDELYQSAVKKIKSSVTDQNITNLTGILSVIEHVKASADISCSIAKN FC
Specific function: Unknown
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27029; Mature: 26898
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKMFGKLFGDSPKTSETPQAFTIKIDPLKFNLSIKPSGTVHVQLESLKQKLTKLSSNVE CCCHHHHHHCCCCCCCCCCCEEEEEEECEEEEEEECCCCEEEEEHHHHHHHHHHHHCCCC NNLMLSIRASTKQNVDLASSAFKFDEEYIQKGKFEVEYLTLAYLSFQQLDDDQLAIVKNA CCEEEEEECCCCCCCHHHHHHHHCCHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHHHHHH RMILQELERLAQFALNIADKTGHVQFANVQELHKDEYGLKPMGDITAEMIKKAVEAFVSG HHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC NAKHASETLGMMKEIDELYQSAVKKIKSSVTDQNITNLTGILSVIEHVKASADISCSIAK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEHHHC NFC CCC >Mature Secondary Structure AKMFGKLFGDSPKTSETPQAFTIKIDPLKFNLSIKPSGTVHVQLESLKQKLTKLSSNVE CCHHHHHHCCCCCCCCCCCEEEEEEECEEEEEEECCCCEEEEEHHHHHHHHHHHHCCCC NNLMLSIRASTKQNVDLASSAFKFDEEYIQKGKFEVEYLTLAYLSFQQLDDDQLAIVKNA CCEEEEEECCCCCCCHHHHHHHHCCHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHHHHHH RMILQELERLAQFALNIADKTGHVQFANVQELHKDEYGLKPMGDITAEMIKKAVEAFVSG HHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC NAKHASETLGMMKEIDELYQSAVKKIKSSVTDQNITNLTGILSVIEHVKASADISCSIAK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEHHHC NFC CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA