Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is phoU [H]
Identifier: 119356869
GI number: 119356869
Start: 1179419
End: 1180105
Strand: Direct
Name: phoU [H]
Synonym: Cpha266_1042
Alternate gene names: 119356869
Gene position: 1179419-1180105 (Clockwise)
Preceding gene: 119356868
Following gene: 119356870
Centisome position: 37.63
GC content: 45.71
Gene sequence:
>687_bases ATGTCCGAAAGACCTGTTCATGAATACATCAAGGAGTTGTCTGAAGAGCTCGTTCAACTTTTCAATCTGGTTTTGCGTAA TTTTTATGATGCGCTGCACGCAGTCAAGCATCAGGACGAGCATCAGGCACGAAAGATCAAGCTTGTTGACGATGAGATCG ATATCGCCGAGGTGAGAATCGAAGAGCGGTGCCTTGCTTTTCTTGCGCTTCAGCAACCGGTAGCAAGAGATCTCAGAACG ATCGTCACAATTATGAAAATCAATGACGATCTTGAACGGATTGGAGATCTGGCGGTTCATATCATCGAAAGAATTCCGGA AATCAGCCTGGAGATGCTCGATAGATTTGATTTCGAGGAGATGGGCCATCTTGCCGGAGAGATGACCAAAAAGTCAATCG AAGCGTTTGTCAACAAGGATAAGGTTCTTGCCGAACAGGTCTGTGCCCTTGACGATGAGATTGACGCAATGCACAGTTCA GCCTTTAAAAGGGTCGCGGCGATCATGAAAAGTCCTGATGCCGATGTTGATCAGCTTATTTCCGTTCTCAGCATATCCCG CTATATTGAACGAATGGCCGATCATGCAACGAGAATTGCTATTGAGGTGATTTATCTCGTAACCGGTGAAATTGTACGCC ACGGAGAGAGCTCTTTTGAAAAGATGATCAAGTCGCTCAAAGACTGA
Upstream 100 bases:
>100_bases GAGCATGCACCAACGGCGCAGTTATTCACCAACCCGAAAGACAGGATGACCGAAGATTACATTACCGGAAGATTCAGCTA ACGAAATAATCATACGACCC
Downstream 100 bases:
>100_bases TGTGATCTTGCTGAGGTAACTATTCCTGGTTTTTTTGTTTTTTAACTTGCATATAACCTCACTGCTCAGCTAAATTAGAC AACACGTGATACATTCTGCA
Product: phosphate uptake regulator, PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSERPVHEYIKELSEELVQLFNLVLRNFYDALHAVKHQDEHQARKIKLVDDEIDIAEVRIEERCLAFLALQQPVARDLRT IVTIMKINDDLERIGDLAVHIIERIPEISLEMLDRFDFEEMGHLAGEMTKKSIEAFVNKDKVLAEQVCALDDEIDAMHSS AFKRVAAIMKSPDADVDQLISVLSISRYIERMADHATRIAIEVIYLVTGEIVRHGESSFEKMIKSLKD
Sequences:
>Translated_228_residues MSERPVHEYIKELSEELVQLFNLVLRNFYDALHAVKHQDEHQARKIKLVDDEIDIAEVRIEERCLAFLALQQPVARDLRT IVTIMKINDDLERIGDLAVHIIERIPEISLEMLDRFDFEEMGHLAGEMTKKSIEAFVNKDKVLAEQVCALDDEIDAMHSS AFKRVAAIMKSPDADVDQLISVLSISRYIERMADHATRIAIEVIYLVTGEIVRHGESSFEKMIKSLKD >Mature_227_residues SERPVHEYIKELSEELVQLFNLVLRNFYDALHAVKHQDEHQARKIKLVDDEIDIAEVRIEERCLAFLALQQPVARDLRTI VTIMKINDDLERIGDLAVHIIERIPEISLEMLDRFDFEEMGHLAGEMTKKSIEAFVNKDKVLAEQVCALDDEIDAMHSSA FKRVAAIMKSPDADVDQLISVLSISRYIERMADHATRIAIEVIYLVTGEIVRHGESSFEKMIKSLKD
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=221, Percent_Identity=25.3393665158371, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26213; Mature: 26081
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERPVHEYIKELSEELVQLFNLVLRNFYDALHAVKHQDEHQARKIKLVDDEIDIAEVRI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHH EERCLAFLALQQPVARDLRTIVTIMKINDDLERIGDLAVHIIERIPEISLEMLDRFDFEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHH MGHLAGEMTKKSIEAFVNKDKVLAEQVCALDDEIDAMHSSAFKRVAAIMKSPDADVDQLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH SVLSISRYIERMADHATRIAIEVIYLVTGEIVRHGESSFEKMIKSLKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure SERPVHEYIKELSEELVQLFNLVLRNFYDALHAVKHQDEHQARKIKLVDDEIDIAEVRI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHH EERCLAFLALQQPVARDLRTIVTIMKINDDLERIGDLAVHIIERIPEISLEMLDRFDFEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHH MGHLAGEMTKKSIEAFVNKDKVLAEQVCALDDEIDAMHSSAFKRVAAIMKSPDADVDQLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH SVLSISRYIERMADHATRIAIEVIYLVTGEIVRHGESSFEKMIKSLKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]