Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is pstS1 [H]
Identifier: 119356864
GI number: 119356864
Start: 1173970
End: 1174788
Strand: Direct
Name: pstS1 [H]
Synonym: Cpha266_1037
Alternate gene names: 119356864
Gene position: 1173970-1174788 (Clockwise)
Preceding gene: 119356863
Following gene: 119356865
Centisome position: 37.46
GC content: 47.86
Gene sequence:
>819_bases ATGAAACTGTTCAGAAAAATACTCTTAAGTGCCGCTGTCCTGGGTGTTATGGCTTCAGGTACAGCCGAGGCTGCCGGTAA AATCGTTATGGACGGATCGACGACTGTTGGCCCGATCGCGAAATCCTTTGCGGCCTACTTCACCAAAACAACCGGAGTTC AGGTGACGGTCAGTGAATCAGGTTCAGGCAATGGTGCTAAAAGTCTGATCAACAAGACCTGTGATATCGGTAATATGTCG CGCGCCATGAAAAGTAATGAGGTTATGGCAGCCAGAAGCAAAGGTGTTAATCCTGTTGAGCACGTTATTGCTCTTGACGG TATTGCAATGGTTGTTCATCCGAGCAACAGGGTTGATGCGCTTTCAAAAGCCCAGATTCAGGGGATATATATGGGCAAAT ATACCAACTGGAGTCAGGTTGGCGGTCCTAATGCGGCTATTGTCATTATCCAGCGCGAGTCGAACAGCGGAACTCAGGAT ACCTTCAAGGAGCTGGTGATGGGTAAAGACAGTCCTATTTCCAAGAGAGCCGAGACCCAGGCAAGCAACGGGGCAGTCAA AAGCCGTGTCAGTTCAACACCGGCAGCAATCGGTTTTATCGGACTTGGTTTTATTGACAGCTCTGTAAAAGCCTTGTTGG TAGATAAGGTTGAACCGGAAGTGAGAACGGTGAAAAATGGTACCTACCCAATTTCAAGGCCTCTTTTCATGTACACCAAT GGTCAGGCAACAGGAGTGATCAAGCAGTTTATTGATCTGGCCAAAACAGAAGAGGGCAAGCGTATGATCAGCGAGCTTGG CTATGTGAACCGTTATTGA
Upstream 100 bases:
>100_bases CTAAGGCTGCCCGTGCAGTGATGCACGGGCAGCCTTGAAAGCCGGAGATATGACCGATAACCATTTTTCGTCTTACTAAT TTCAAATCATAAAAATCAAC
Downstream 100 bases:
>100_bases TCCCGGTTTAATTTTTTTTATCTTTCCCCTGATTTTTCCCCGAAAAAGCCGCCTGGTATCAGGCGGCTTTTTTTGCGCTG AGTACCCTTGCGTTTTTCAA
Product: phosphate binding protein
Products: NA
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MKLFRKILLSAAVLGVMASGTAEAAGKIVMDGSTTVGPIAKSFAAYFTKTTGVQVTVSESGSGNGAKSLINKTCDIGNMS RAMKSNEVMAARSKGVNPVEHVIALDGIAMVVHPSNRVDALSKAQIQGIYMGKYTNWSQVGGPNAAIVIIQRESNSGTQD TFKELVMGKDSPISKRAETQASNGAVKSRVSSTPAAIGFIGLGFIDSSVKALLVDKVEPEVRTVKNGTYPISRPLFMYTN GQATGVIKQFIDLAKTEEGKRMISELGYVNRY
Sequences:
>Translated_272_residues MKLFRKILLSAAVLGVMASGTAEAAGKIVMDGSTTVGPIAKSFAAYFTKTTGVQVTVSESGSGNGAKSLINKTCDIGNMS RAMKSNEVMAARSKGVNPVEHVIALDGIAMVVHPSNRVDALSKAQIQGIYMGKYTNWSQVGGPNAAIVIIQRESNSGTQD TFKELVMGKDSPISKRAETQASNGAVKSRVSSTPAAIGFIGLGFIDSSVKALLVDKVEPEVRTVKNGTYPISRPLFMYTN GQATGVIKQFIDLAKTEEGKRMISELGYVNRY >Mature_272_residues MKLFRKILLSAAVLGVMASGTAEAAGKIVMDGSTTVGPIAKSFAAYFTKTTGVQVTVSESGSGNGAKSLINKTCDIGNMS RAMKSNEVMAARSKGVNPVEHVIALDGIAMVVHPSNRVDALSKAQIQGIYMGKYTNWSQVGGPNAAIVIIQRESNSGTQD TFKELVMGKDSPISKRAETQASNGAVKSRVSSTPAAIGFIGLGFIDSSVKALLVDKVEPEVRTVKNGTYPISRPLFMYTN GQATGVIKQFIDLAKTEEGKRMISELGYVNRY
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 28819; Mature: 28819
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFRKILLSAAVLGVMASGTAEAAGKIVMDGSTTVGPIAKSFAAYFTKTTGVQVTVSES CHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECC GSGNGAKSLINKTCDIGNMSRAMKSNEVMAARSKGVNPVEHVIALDGIAMVVHPSNRVDA CCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCEEEEECCCCHHHH LSKAQIQGIYMGKYTNWSQVGGPNAAIVIIQRESNSGTQDTFKELVMGKDSPISKRAETQ HHHHHEEEEEEECCCCCHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHH ASNGAVKSRVSSTPAAIGFIGLGFIDSSVKALLVDKVEPEVRTVKNGTYPISRPLFMYTN CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEC GQATGVIKQFIDLAKTEEGKRMISELGYVNRY CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKLFRKILLSAAVLGVMASGTAEAAGKIVMDGSTTVGPIAKSFAAYFTKTTGVQVTVSES CHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECC GSGNGAKSLINKTCDIGNMSRAMKSNEVMAARSKGVNPVEHVIALDGIAMVVHPSNRVDA CCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCEEEEECCCCHHHH LSKAQIQGIYMGKYTNWSQVGGPNAAIVIIQRESNSGTQDTFKELVMGKDSPISKRAETQ HHHHHEEEEEEECCCCCHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHH ASNGAVKSRVSSTPAAIGFIGLGFIDSSVKALLVDKVEPEVRTVKNGTYPISRPLFMYTN CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEC GQATGVIKQFIDLAKTEEGKRMISELGYVNRY CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12354221 [H]